RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W YOR015WQ12169 119 aa1.77□□□□□ -2.13
PRE1YER012W SNU23Q12368 194 aaPredicted RBP1.77□□□□□ -2.13
PRE1YER012W RRT15Q3E811 62 aa1.77□□□□□ -2.13
PRE1YER012W YHR213W-AQ8TGT4 77 aa1.77□□□□□ -2.13
PRE1YER012W YDR157WA0A023PZE8 133 aa1.76□□□□□ -2.13
PRE1YER012W VAR1P02381 398 aa1.76□□□□□ -2.13
PRE1YER012W RPL2AP0CX45 254 aaKnown RBP1.76□□□□□ -2.13
PRE1YER012W RPL2BP0CX46 254 aaKnown RBP1.76□□□□□ -2.13
PRE1YER012W FZF1P32805 299 aa1.76□□□□□ -2.13
PRE1YER012W YEA4P40004 342 aa1.76□□□□□ -2.13
PRE1YER012W POG1P40473 351 aa1.76□□□□□ -2.13
PRE1YER012W UBC7Q02159 165 aa1.76□□□□□ -2.13
PRE1YER012W SGF11Q03067 99 aa1.76□□□□□ -2.13
PRE1YER012W TMA23Q03525 211 aa1.76□□□□□ -2.13
PRE1YER012W SDH7Q04401 133 aa1.76□□□□□ -2.13
PRE1YER012W YPL229WQ99395 206 aa1.76□□□□□ -2.13
PRE1YER012W HTB2P02294 131 aa1.75□□□□□ -2.13
PRE1YER012W RPB3P16370 318 aaKnown RBP1.75□□□□□ -2.13
PRE1YER012W RTC3P38804 111 aaPredicted RBP1.75□□□□□ -2.13
PRE1YER012W TEM1P38987 245 aa1.75□□□□□ -2.13
PRE1YER012W PGD1P40356 397 aa1.75□□□□□ -2.13
PRE1YER012W SNX4P47057 423 aa1.75□□□□□ -2.13
PRE1YER012W YGL088WP53151 121 aa1.75□□□□□ -2.13
PRE1YER012W DID2P69771 204 aa1.75□□□□□ -2.13
PRE1YER012W YOR268CQ08734 132 aa1.75□□□□□ -2.13
PRE1YER012W SMT3Q12306 101 aaKnown RBP1.75□□□□□ -2.13
PRE1YER012W Q0255P03881 472 aa1.74□□□□□ -2.13
PRE1YER012W RPL14AP36105 138 aaKnown RBP1.74□□□□□ -2.13
PRE1YER012W MSA2P36157 363 aa1.74□□□□□ -2.13
PRE1YER012W RPL14BP38754 138 aaKnown RBP1.74□□□□□ -2.13
PRE1YER012W YMR253CQ04835 414 aa1.74□□□□□ -2.13
PRE1YER012W ANT1Q06497 328 aa1.74□□□□□ -2.13
PRE1YER012W YBR200W-AQ3E755 54 aa1.74□□□□□ -2.13
PRE1YER012W YCR023CP25351 611 aa1.73□□□□□ -2.13
PRE1YER012W NTF2P33331 125 aaKnown RBP1.73□□□□□ -2.13
PRE1YER012W IRC22P40006 225 aa1.73□□□□□ -2.13
PRE1YER012W YNL217WP40152 326 aa1.73□□□□□ -2.13
PRE1YER012W MCM22P47167 239 aa1.73□□□□□ -2.13
PRE1YER012W ORM1P53224 222 aa1.73□□□□□ -2.13
PRE1YER012W RGM1Q00453 211 aa1.73□□□□□ -2.13
PRE1YER012W YHR139C-AO13536 103 aa1.72□□□□□ -2.13
PRE1YER012W MRS1P07266 363 aa1.72□□□□□ -2.13
PRE1YER012W ANB1P19211 157 aa1.72□□□□□ -2.13
PRE1YER012W QCR9P22289 66 aa1.72□□□□□ -2.13
PRE1YER012W RPL13BP40212 199 aaKnown RBP1.72□□□□□ -2.13
PRE1YER012W SNO1Q03144 224 aa1.72□□□□□ -2.13
PRE1YER012W RPL13AQ12690 199 aaPredicted RBP1.72□□□□□ -2.13
PRE1YER012W YPR145C-AQ2V2P0 78 aa1.72□□□□□ -2.13
PRE1YER012W UBI4P0CG63 381 aaKnown RBP1.71□□□□□ -2.14
PRE1YER012W HSP12P22943 109 aaKnown RBP1.71□□□□□ -2.14
PRE1YER012W YHR173CP38864 112 aa1.71□□□□□ -2.14
PRE1YER012W GCV3P39726 170 aaPredicted RBP1.71□□□□□ -2.14
PRE1YER012W ERG28P40030 148 aa1.71□□□□□ -2.14
PRE1YER012W YNL200CP40165 246 aaKnown RBP1.71□□□□□ -2.14
PRE1YER012W JAC1P53193 184 aa1.71□□□□□ -2.14
PRE1YER012W BRP1P53194 125 aa1.71□□□□□ -2.14
PRE1YER012W DAD4P69851 72 aa1.71□□□□□ -2.14
PRE1YER012W MRPS17Q03246 237 aaPredicted RBP1.71□□□□□ -2.14
PRE1YER012W YLR042CQ07990 161 aa1.71□□□□□ -2.14
PRE1YER012W YPL162CQ12042 273 aa1.71□□□□□ -2.14
PRE1YER012W COX19Q3E731 98 aa1.71□□□□□ -2.14
PRE1YER012W YKL183C-AQ3E765 70 aa1.71□□□□□ -2.14
PRE1YER012W YKR032WP36127 104 aa1.7□□□□□ -2.14
PRE1YER012W SRP14P38985 146 aa1.7□□□□□ -2.14
PRE1YER012W YJR146WP47174 117 aa1.7□□□□□ -2.14
PRE1YER012W YGR017WP53210 297 aa1.7□□□□□ -2.14
PRE1YER012W FCF2Q12035 217 aaPredicted RBP1.7□□□□□ -2.14
PRE1YER012W RPL33AP05744 107 aaKnown RBP1.69□□□□□ -2.14
PRE1YER012W YHR032W-AP0C5N6 59 aa1.69□□□□□ -2.14
PRE1YER012W MAG1P22134 296 aaKnown RBP1.69□□□□□ -2.14
PRE1YER012W MRPL28P36527 147 aa1.69□□□□□ -2.14
PRE1YER012W EMC5P40540 141 aa1.69□□□□□ -2.14
PRE1YER012W RPL33BP41056 107 aaKnown RBP1.69□□□□□ -2.14
PRE1YER012W DGA1Q08650 418 aa1.69□□□□□ -2.14
PRE1YER012W YGR240C-AQ3E786 66 aa1.69□□□□□ -2.14
PRE1YER012W YLR342W-AQ3E810 57 aa1.69□□□□□ -2.14
PRE1YER012W SEC59P20048 519 aa1.68□□□□□ -2.14
PRE1YER012W SRP21P32342 167 aa1.68□□□□□ -2.14
PRE1YER012W AME1P38313 324 aa1.68□□□□□ -2.14
PRE1YER012W PEX17P40155 199 aa1.68□□□□□ -2.14
PRE1YER012W SMD3P43321 101 aaKnown RBP1.68□□□□□ -2.14
PRE1YER012W OST2P46964 130 aa1.68□□□□□ -2.14
PRE1YER012W MGA1P53050 456 aa1.68□□□□□ -2.14
PRE1YER012W PAU4P53427 120 aa1.68□□□□□ -2.14
PRE1YER012W AIM34Q03673 198 aa1.68□□□□□ -2.14
PRE1YER012W COA4Q05809 96 aa1.68□□□□□ -2.14
PRE1YER012W ATP14Q12349 124 aa1.68□□□□□ -2.14
PRE1YER012W YBR121C-AP0C5L4 52 aa1.67□□□□□ -2.14
PRE1YER012W PAU1P0CE88 120 aa1.67□□□□□ -2.14
PRE1YER012W PAU14P0CE89 120 aa1.67□□□□□ -2.14
PRE1YER012W PAU6P0CE90 120 aa1.67□□□□□ -2.14
PRE1YER012W PAU18P0CE91 120 aa1.67□□□□□ -2.14
PRE1YER012W PAU8P0CE92 120 aa1.67□□□□□ -2.14
PRE1YER012W PAU11P0CE93 120 aa1.67□□□□□ -2.14
PRE1YER012W MRPL31P14063 131 aaPredicted RBP1.67□□□□□ -2.14
PRE1YER012W UBC5P15732 148 aa1.67□□□□□ -2.14
PRE1YER012W PAM17P36147 197 aa1.67□□□□□ -2.14
PRE1YER012W PAU13P38725 120 aa1.67□□□□□ -2.14
PRE1YER012W SPC25P40014 221 aa1.67□□□□□ -2.14
PRE1YER012W YCL001W-AP87012 153 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms