RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W YPL229WQ99395 206 aa5.58□□□□□ -1.52
NUP84YDL116W MID2P36027 376 aa5.57□□□□□ -1.52
NUP84YDL116W YHL044WP38727 235 aa5.57□□□□□ -1.52
NUP84YDL116W YER121WP40076 114 aa5.57□□□□□ -1.52
NUP84YDL116W YOL085CQ99345 113 aa5.57□□□□□ -1.52
NUP84YDL116W HMRA2P0CY13 119 aa5.57□□□□□ -1.52
NUP84YDL116W PRS4P38063 326 aaPredicted RBP5.57□□□□□ -1.52
NUP84YDL116W YPL073CP40323 161 aa5.57□□□□□ -1.52
NUP84YDL116W NCA3P46955 337 aa5.57□□□□□ -1.52
NUP84YDL116W YNL184CP53876 108 aa5.57□□□□□ -1.52
NUP84YDL116W YIL102C-AQ2V2P5 75 aa5.57□□□□□ -1.52
NUP84YDL116W RPS23AP0CX29 145 aaKnown RBP5.56□□□□□ -1.52
NUP84YDL116W RPS23BP0CX30 145 aa5.56□□□□□ -1.52
NUP84YDL116W ELC1Q03071 99 aa5.56□□□□□ -1.52
NUP84YDL116W RPL12AP0CX53 165 aaKnown RBP5.56□□□□□ -1.52
NUP84YDL116W RPL12BP0CX54 165 aa5.56□□□□□ -1.52
NUP84YDL116W MST28P39552 234 aa5.56□□□□□ -1.52
NUP84YDL116W VTC1P40046 129 aaRIP-Chip data5.56□□□□□ -1.52not detected
NUP84YDL116W IMP2P46972 177 aa5.56□□□□□ -1.52
NUP84YDL116W LCB3P47013 409 aa5.56□□□□□ -1.52
NUP84YDL116W AQY1P0CD91 305 aa5.55□□□□□ -1.52
NUP84YDL116W MRPL38P35996 138 aaPredicted RBP5.55□□□□□ -1.52
NUP84YDL116W RRT1P38192 103 aa5.55□□□□□ -1.52
NUP84YDL116W MIX17Q03667 156 aa5.55□□□□□ -1.52
NUP84YDL116W SDH7Q04401 133 aa5.55□□□□□ -1.52
NUP84YDL116W FPR2P32472 135 aa5.55□□□□□ -1.52
NUP84YDL116W YDR042CQ03205 200 aa5.55□□□□□ -1.52
NUP84YDL116W PBP4Q07362 185 aaKnown RBP5.55□□□□□ -1.52
NUP84YDL116W YPL261CQ08976 102 aa5.55□□□□□ -1.52
NUP84YDL116W CYC7P00045 113 aa5.54□□□□□ -1.52
NUP84YDL116W RPL27BP0C2H7 136 aaKnown RBP5.54□□□□□ -1.52
NUP84YDL116W YJL027CP47063 138 aaPredicted RBP5.54□□□□□ -1.52
NUP84YDL116W YGL260WP53056 76 aa5.54□□□□□ -1.52
NUP84YDL116W GPI19Q04082 140 aa5.54□□□□□ -1.52
NUP84YDL116W OXA1P39952 402 aa5.53□□□□□ -1.52
NUP84YDL116W YML079WQ03629 201 aa5.53□□□□□ -1.52
NUP84YDL116W YOL160WQ08321 113 aa5.53□□□□□ -1.52
NUP84YDL116W PRM7Q12459 698 aa5.53□□□□□ -1.52
NUP84YDL116W HTL1Q9URQ5 78 aa5.53□□□□□ -1.52
NUP84YDL116W BPH1P25356 2167 aa5.53□□□□□ -1.52
NUP84YDL116W RPL27AP0C2H6 136 aaKnown RBP5.53□□□□□ -1.52
NUP84YDL116W INO4P13902 151 aa5.53□□□□□ -1.52
NUP84YDL116W YER076CP40049 302 aa5.53□□□□□ -1.52
NUP84YDL116W YNR077CP53758 84 aa5.53□□□□□ -1.52
NUP84YDL116W AIM34Q03673 198 aa5.53□□□□□ -1.52
NUP84YDL116W PHO85P17157 305 aa5.52□□□□□ -1.53
NUP84YDL116W YPT53P36019 220 aa5.52□□□□□ -1.53
NUP84YDL116W MOH1P38191 138 aa5.52□□□□□ -1.53
NUP84YDL116W POP7P38291 140 aa5.52□□□□□ -1.53
NUP84YDL116W YLR112WQ12130 139 aa5.52□□□□□ -1.53
NUP84YDL116W VAR1P02381 398 aa5.52□□□□□ -1.53
NUP84YDL116W YHR140WP38842 239 aa5.52□□□□□ -1.53
NUP84YDL116W RPP2AP05319 106 aaKnown RBP5.51□□□□□ -1.53
NUP84YDL116W GPI18P38211 433 aa5.51□□□□□ -1.53
NUP84YDL116W SUR7P54003 302 aa5.51□□□□□ -1.53
NUP84YDL116W UBC7Q02159 165 aa5.51□□□□□ -1.53
NUP84YDL116W ISD11Q6Q560 94 aa5.51□□□□□ -1.53
NUP84YDL116W SNA4Q07549 140 aa5.5□□□□□ -1.53
NUP84YDL116W YER175W-AQ8TGU4 54 aa5.5□□□□□ -1.53
NUP84YDL116W SPS100P13130 326 aa5.5□□□□□ -1.53
NUP84YDL116W AGA1P32323 725 aa5.5□□□□□ -1.53
NUP84YDL116W YKL044WP36092 106 aa5.49□□□□□ -1.53
NUP84YDL116W CIN5P40917 295 aa5.49□□□□□ -1.53
NUP84YDL116W TIM22Q12328 207 aa5.49□□□□□ -1.53
NUP84YDL116W YKL070WP36087 169 aa5.49□□□□□ -1.53
NUP84YDL116W RPL32P38061 130 aaKnown RBP5.49□□□□□ -1.53
NUP84YDL116W OST2P46964 130 aa5.49□□□□□ -1.53
NUP84YDL116W YNL190WP53872 204 aa5.49□□□□□ -1.53
NUP84YDL116W PRM3Q08931 133 aa5.49□□□□□ -1.53
NUP84YDL116W KTI12P34253 313 aaKnown RBP5.48□□□□□ -1.53
NUP84YDL116W YIP1P53039 248 aa5.48□□□□□ -1.53
NUP84YDL116W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
NUP84YDL116W COA3Q3E7B2 85 aa5.48□□□□□ -1.53
NUP84YDL116W LDB16P25587 256 aa5.48□□□□□ -1.53
NUP84YDL116W ATX1P38636 73 aa5.48□□□□□ -1.53
NUP84YDL116W YER181CP40097 107 aa5.48□□□□□ -1.53
NUP84YDL116W YBL112CQ3E7Y4 105 aa5.48□□□□□ -1.53
NUP84YDL116W YER085CP40058 173 aa5.47□□□□□ -1.53
NUP84YDL116W YLR342W-AQ3E810 57 aa5.47□□□□□ -1.53
NUP84YDL116W ATP15P21306 62 aa5.46□□□□□ -1.53
NUP84YDL116W NHP2P32495 156 aaPredicted RBP5.46□□□□□ -1.53
NUP84YDL116W YKR041WP36134 250 aa5.46□□□□□ -1.53
NUP84YDL116W YFL065CP43539 102 aa5.46□□□□□ -1.53
NUP84YDL116W YGL088WP53151 121 aa5.46□□□□□ -1.53
NUP84YDL116W YLR296WQ05898 108 aa5.46□□□□□ -1.53
NUP84YDL116W YPR203WQ08994 102 aa5.46□□□□□ -1.53
NUP84YDL116W RPL28P02406 149 aaKnown RBP5.46□□□□□ -1.54
NUP84YDL116W YBR144CP34215 104 aa5.46□□□□□ -1.54
NUP84YDL116W MGR2Q02889 113 aa5.46□□□□□ -1.54
NUP84YDL116W YPR053CQ6Q5F3 151 aa5.46□□□□□ -1.54
NUP84YDL116W DSE2P38844 325 aa5.45□□□□□ -1.54
NUP84YDL116W AIM11P87275 137 aa5.45□□□□□ -1.54
NUP84YDL116W FCF1Q05498 189 aaPredicted RBP5.45□□□□□ -1.54
NUP84YDL116W TMC1Q08422 150 aaPredicted RBP5.45□□□□□ -1.54
NUP84YDL116W PFY1P07274 126 aa5.45□□□□□ -1.54
NUP84YDL116W YHL037CP38733 133 aa5.45□□□□□ -1.54
NUP84YDL116W YAR1P46683 200 aa5.45□□□□□ -1.54
NUP84YDL116W YOR097CQ12274 175 aaPredicted RBP5.45□□□□□ -1.54
NUP84YDL116W YCR075W-AQ3E830 75 aa5.45□□□□□ -1.54
NUP84YDL116W YBR056W-AI2HB52 66 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 111.5 ms