RNA–Protein interactions for RNA: YDL022W

GPD1, Transcript of NAD-dependent glycerol-3-phosphate dehydrogenase, yeast

Gene GPD1, Length 1,176 nt, Biotype protein coding, Subcellular localisation Cell cortex, Endoplasmic reticulum, Peroxisome .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GPD1	YDL022W	TIM22	Q12328	207 aa		4.77	□□□□□ -1.65
GPD1	YDL022W	DCN1	Q12395	269 aa		4.77	□□□□□ -1.65
GPD1	YDL022W	RPL11A	P0C0W9	174 aa	Known RBP	4.76	□□□□□ -1.65
GPD1	YDL022W	TIR1	P10863	254 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	MRPL44	P19956	98 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	SAP30	P38429	201 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	HSP10	P38910	106 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	YNL217W	P40152	326 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	YGR149W	P48236	432 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	YDL183C	P48569	320 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	ATP23	P53722	227 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	ERI1	P62651	68 aa	Known RBP	4.76	□□□□□ -1.65
GPD1	YDL022W	YOP1	Q12402	180 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	RPL11B	Q3E757	174 aa	Predicted RBP	4.76	□□□□□ -1.65
GPD1	YDL022W	YNR034W-A	Q3E841	98 aa		4.76	□□□□□ -1.65
GPD1	YDL022W	DIA1	P54005	336 aa		4.75	□□□□□ -1.65
GPD1	YDL022W	DAD3	P69850	94 aa		4.75	□□□□□ -1.65
GPD1	YDL022W	YPR195C	Q06594	109 aa		4.75	□□□□□ -1.65
GPD1	YDL022W	ISU2	Q12056	156 aa		4.75	□□□□□ -1.65
GPD1	YDL022W	YIL134C-A	Q45U18	67 aa		4.75	□□□□□ -1.65
GPD1	YDL022W	YPL229W	Q99395	206 aa		4.75	□□□□□ -1.65
GPD1	YDL022W	RTC6	O14464	93 aa		4.74	□□□□□ -1.65
GPD1	YDL022W	ANB1	P19211	157 aa		4.74	□□□□□ -1.65
GPD1	YDL022W	HUA1	P40325	198 aa		4.74	□□□□□ -1.65
GPD1	YDL022W	YFR045W	P43617	309 aa		4.74	□□□□□ -1.65
GPD1	YDL022W	HIT1	P46973	164 aa		4.74	□□□□□ -1.65
GPD1	YDL022W	YJL028W	P47062	111 aa		4.74	□□□□□ -1.65
GPD1	YDL022W	OST3	P48439	350 aa		4.74	□□□□□ -1.65
GPD1	YDL022W	PBA1	Q05778	276 aa		4.74	□□□□□ -1.65
GPD1	YDL022W	FMP49	A0A023PZB3	126 aa		4.73	□□□□□ -1.65
GPD1	YDL022W	FUN14	P18411	198 aa		4.73	□□□□□ -1.65
GPD1	YDL022W	SRP21	P32342	167 aa		4.73	□□□□□ -1.65
GPD1	YDL022W	YIL163C	P40448	117 aa		4.73	□□□□□ -1.65
GPD1	YDL022W	COA6	Q3E846	104 aa		4.73	□□□□□ -1.65
GPD1	YDL022W	YPR053C	Q6Q5F3	151 aa		4.73	□□□□□ -1.65
GPD1	YDL022W	YLL066W-B	Q8TGJ7	56 aa		4.73	□□□□□ -1.65
GPD1	YDL022W	YPR010C-A	A5Z2X5	72 aa		4.72	□□□□□ -1.65
GPD1	YDL022W	TEM1	P38987	245 aa		4.72	□□□□□ -1.65
GPD1	YDL022W	DPP1	Q05521	289 aa		4.72	□□□□□ -1.65
GPD1	YDL022W	MHR1	Q06630	226 aa		4.72	□□□□□ -1.65
GPD1	YDL022W	ERG27	Q12452	347 aa	Known RBP	4.72	□□□□□ -1.65
GPD1	YDL022W	RPL33A	P05744	107 aa	Known RBP	4.71	□□□□□ -1.66
GPD1	YDL022W	YCR023C	P25351	611 aa		4.71	□□□□□ -1.66
GPD1	YDL022W	KTI12	P34253	313 aa	Known RBP	4.71	□□□□□ -1.66
GPD1	YDL022W	DAD2	P36162	133 aa		4.71	□□□□□ -1.66
GPD1	YDL022W	CDC40	P40968	455 aa	Predicted RBP	4.71	□□□□□ -1.66
GPD1	YDL022W	RPL33B	P41056	107 aa	Known RBP	4.71	□□□□□ -1.66
GPD1	YDL022W	APS2	Q00381	147 aa		4.71	□□□□□ -1.66
GPD1	YDL022W	NAT3	Q06504	195 aa		4.71	□□□□□ -1.66
GPD1	YDL022W	DGA1	Q08650	418 aa		4.71	□□□□□ -1.66
GPD1	YDL022W	POR1	P04840	283 aa	Known RBP	4.7	□□□□□ -1.66
GPD1	YDL022W	YGL010W	P25338	174 aa		4.7	□□□□□ -1.66
GPD1	YDL022W	FZF1	P32805	299 aa		4.7	□□□□□ -1.66
GPD1	YDL022W	MRPL11	P36521	249 aa	Predicted RBP	4.7	□□□□□ -1.66
GPD1	YDL022W	CUP2	P15315	225 aa		4.69	□□□□□ -1.66
GPD1	YDL022W	UBC5	P15732	148 aa		4.69	□□□□□ -1.66
GPD1	YDL022W	MIX23	P38162	196 aa		4.69	□□□□□ -1.66
GPD1	YDL022W	PMP3	P87284	55 aa		4.69	□□□□□ -1.66
GPD1	YDL022W	GIM5	Q04493	163 aa		4.69	□□□□□ -1.66
GPD1	YDL022W	SMT3	Q12306	101 aa	Known RBP	4.69	□□□□□ -1.66
GPD1	YDL022W	YMR122W-A	Q3E842	84 aa		4.69	□□□□□ -1.66
GPD1	YDL022W	RPL27A	P0C2H6	136 aa	Known RBP	4.68	□□□□□ -1.66
GPD1	YDL022W	MRPL31	P14063	131 aa	Predicted RBP	4.68	□□□□□ -1.66
GPD1	YDL022W	QRI5	P32344	111 aa		4.68	□□□□□ -1.66
GPD1	YDL022W	YHR140W	P38842	239 aa		4.68	□□□□□ -1.66
GPD1	YDL022W	LCL2	Q08045	131 aa		4.68	□□□□□ -1.66
GPD1	YDL022W	FYV7	Q12247	151 aa		4.68	□□□□□ -1.66
GPD1	YDL022W	SRP14	P38985	146 aa		4.67	□□□□□ -1.66
GPD1	YDL022W	CSM4	Q08955	156 aa		4.67	□□□□□ -1.66
GPD1	YDL022W	POM33	Q12164	279 aa		4.67	□□□□□ -1.66
GPD1	YDL022W	ATP5	P09457	212 aa		4.66	□□□□□ -1.66
GPD1	YDL022W	HMRA1	P0CY11	126 aa		4.66	□□□□□ -1.66
GPD1	YDL022W	MRP49	P32388	137 aa		4.66	□□□□□ -1.66
GPD1	YDL022W	YBR090C	P38253	122 aa		4.66	□□□□□ -1.66
GPD1	YDL022W	SAE3	P89114	91 aa		4.66	□□□□□ -1.66
GPD1	YDL022W	GPI19	Q04082	140 aa		4.66	□□□□□ -1.66
GPD1	YDL022W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.66	□□□□□ -1.66
GPD1	YDL022W	YPR014C	Q6B0W2	109 aa		4.66	□□□□□ -1.66
GPD1	YDL022W	RPL42A	P0CX27	106 aa	Known RBP	4.65	□□□□□ -1.67
GPD1	YDL022W	RPL42B	P0CX28	106 aa	Known RBP	4.65	□□□□□ -1.67
GPD1	YDL022W	YPT53	P36019	220 aa		4.65	□□□□□ -1.67
GPD1	YDL022W	PAM17	P36147	197 aa		4.65	□□□□□ -1.67
GPD1	YDL022W	RPB11	P38902	120 aa		4.65	□□□□□ -1.67
GPD1	YDL022W	PAU7	P39545	55 aa		4.65	□□□□□ -1.67
GPD1	YDL022W	YDR115W	Q04598	105 aa		4.65	□□□□□ -1.67
GPD1	YDL022W	TVP18	Q04767	167 aa		4.65	□□□□□ -1.67
GPD1	YDL022W	ARC18	Q05933	178 aa	Known RBP	4.65	□□□□□ -1.67
GPD1	YDL022W	YCL001W-B	Q96VH2	84 aa		4.65	□□□□□ -1.67
GPD1	YDL022W	ERG28	P40030	148 aa		4.64	□□□□□ -1.67
GPD1	YDL022W	BET5	Q03630	159 aa		4.64	□□□□□ -1.67
GPD1	YDL022W	NAT5	Q08689	176 aa		4.64	□□□□□ -1.67
GPD1	YDL022W	YCR024C-B	Q3E7Z8	88 aa		4.64	□□□□□ -1.67
GPD1	YDL022W	MRP10	O75012	95 aa		4.63	□□□□□ -1.67
GPD1	YDL022W	SVP26	P38869	228 aa		4.63	□□□□□ -1.67
GPD1	YDL022W	YER134C	P40081	178 aa		4.63	□□□□□ -1.67
GPD1	YDL022W	ARC15	P40518	154 aa	RIP-Chip data	4.63	□□□□□ -1.67	not detected
GPD1	YDL022W	PKR1	Q03880	122 aa	Known RBP	4.63	□□□□□ -1.67
GPD1	YDL022W	YDR034C-A	P0C289	58 aa		4.62	□□□□□ -1.67
GPD1	YDL022W	ZRT1	P32804	376 aa		4.62	□□□□□ -1.67
GPD1	YDL022W	GLC8	P41818	229 aa		4.62	□□□□□ -1.67

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