RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YLR112WQ12130 139 aa6.25□□□□□ -1.41
ABP1YCR088W RDL1Q12305 139 aaKnown RBP6.25□□□□□ -1.41
ABP1YCR088W YKL044WP36092 106 aa6.24□□□□□ -1.41
ABP1YCR088W AIM29P36154 155 aa6.24□□□□□ -1.41
ABP1YCR088W ATP23P53722 227 aa6.24□□□□□ -1.41
ABP1YCR088W YML122CQ03207 126 aa6.24□□□□□ -1.41
ABP1YCR088W YMR181CQ03231 154 aa6.24□□□□□ -1.41
ABP1YCR088W BPH1P25356 2167 aa6.24□□□□□ -1.41
ABP1YCR088W CMC1P36064 111 aa6.23□□□□□ -1.41
ABP1YCR088W YER076CP40049 302 aa6.23□□□□□ -1.41
ABP1YCR088W PAI3P01094 68 aa6.23□□□□□ -1.41
ABP1YCR088W YDL022C-AP0C5L6 82 aa6.23□□□□□ -1.41
ABP1YCR088W CPR1P14832 162 aaKnown RBP6.23□□□□□ -1.41
ABP1YCR088W ECM33P38248 429 aaKnown RBP6.23□□□□□ -1.41
ABP1YCR088W YML079WQ03629 201 aa6.23□□□□□ -1.41
ABP1YCR088W FCF1Q05498 189 aaPredicted RBP6.23□□□□□ -1.41
ABP1YCR088W TMC1Q08422 150 aaPredicted RBP6.23□□□□□ -1.41
ABP1YCR088W PCL2P25693 308 aa6.22□□□□□ -1.41
ABP1YCR088W YEL067CP39978 195 aa6.22□□□□□ -1.41
ABP1YCR088W YPL073CP40323 161 aa6.22□□□□□ -1.41
ABP1YCR088W POR2P40478 281 aa6.22□□□□□ -1.41
ABP1YCR088W YIL102C-AQ2V2P5 75 aa6.22□□□□□ -1.41
ABP1YCR088W PFY1P07274 126 aa6.21□□□□□ -1.41
ABP1YCR088W SNF11P38956 169 aa6.21□□□□□ -1.41
ABP1YCR088W SPI1P40092 148 aa6.21□□□□□ -1.41
ABP1YCR088W YGR219WP53307 113 aa6.21□□□□□ -1.41
ABP1YCR088W HMRA2P0CY13 119 aa6.21□□□□□ -1.42
ABP1YCR088W PHO85P17157 305 aa6.21□□□□□ -1.42
ABP1YCR088W CDC43P18898 376 aa6.21□□□□□ -1.42
ABP1YCR088W ANB1P19211 157 aa6.21□□□□□ -1.42
ABP1YCR088W MST28P39552 234 aa6.21□□□□□ -1.42
ABP1YCR088W SUR7P54003 302 aa6.21□□□□□ -1.42
ABP1YCR088W DIA1P54005 336 aa6.21□□□□□ -1.42
ABP1YCR088W YOL085CQ99345 113 aa6.21□□□□□ -1.42
ABP1YCR088W SBH2P52871 88 aa6.2□□□□□ -1.42
ABP1YCR088W DUO1P53168 247 aaKnown RBP6.2□□□□□ -1.42
ABP1YCR088W MSA1Q08471 629 aa6.2□□□□□ -1.42
ABP1YCR088W COA3Q3E7B2 85 aa6.2□□□□□ -1.42
ABP1YCR088W HYP2P23301 157 aaKnown RBP6.19□□□□□ -1.42
ABP1YCR088W KTI12P34253 313 aaKnown RBP6.19□□□□□ -1.42
ABP1YCR088W TEL1P38110 2787 aa6.19□□□□□ -1.42
ABP1YCR088W ADH1P00330 348 aaKnown RBP6.18□□□□□ -1.42
ABP1YCR088W AGA1P32323 725 aa6.18□□□□□ -1.42
ABP1YCR088W YKL070WP36087 169 aa6.18□□□□□ -1.42
ABP1YCR088W YIR020CP40575 100 aa6.18□□□□□ -1.42
ABP1YCR088W YLR296WQ05898 108 aa6.18□□□□□ -1.42
ABP1YCR088W MLF3P32047 452 aa6.18□□□□□ -1.42
ABP1YCR088W YFR057WP43625 151 aa6.18□□□□□ -1.42
ABP1YCR088W YNR077CP53758 84 aa6.18□□□□□ -1.42
ABP1YCR088W ELC1Q03071 99 aa6.18□□□□□ -1.42
ABP1YCR088W YPL261CQ08976 102 aa6.18□□□□□ -1.42
ABP1YCR088W YPR013CQ12145 317 aa6.18□□□□□ -1.42
ABP1YCR088W ARO2P28777 376 aaKnown RBP6.17□□□□□ -1.42
ABP1YCR088W VMA11P32842 164 aa6.17□□□□□ -1.42
ABP1YCR088W YHL044WP38727 235 aa6.17□□□□□ -1.42
ABP1YCR088W MRPL49P40858 161 aaPredicted RBP6.17□□□□□ -1.42
ABP1YCR088W TOS6P48560 102 aa6.17□□□□□ -1.42
ABP1YCR088W YPL257WQ08974 193 aa6.17□□□□□ -1.42
ABP1YCR088W SCW10Q04951 389 aa6.16□□□□□ -1.42
ABP1YCR088W MIC12P38341 106 aa6.16□□□□□ -1.42
ABP1YCR088W GLO1P50107 326 aa6.16□□□□□ -1.42
ABP1YCR088W YKR041WP36134 250 aa6.15□□□□□ -1.43
ABP1YCR088W OXA1P39952 402 aa6.15□□□□□ -1.43
ABP1YCR088W VTC1P40046 129 aaRIP-Chip data6.15□□□□□ -1.43not detected
ABP1YCR088W TIM10P87108 93 aa6.15□□□□□ -1.43
ABP1YCR088W YKL023C-AQ2V2P3 75 aa6.15□□□□□ -1.43
ABP1YCR088W SLO1Q3E784 85 aa6.15□□□□□ -1.43
ABP1YCR088W YHR022CP38763 256 aa6.14□□□□□ -1.43
ABP1YCR088W PRM7Q12459 698 aa6.14□□□□□ -1.43
ABP1YCR088W RPL32P38061 130 aaKnown RBP6.13□□□□□ -1.43
ABP1YCR088W BNA1P47096 177 aa6.13□□□□□ -1.43
ABP1YCR088W AIM34Q03673 198 aa6.13□□□□□ -1.43
ABP1YCR088W NCE103P53615 221 aa6.13□□□□□ -1.43
ABP1YCR088W YBR200W-AQ3E755 54 aa6.13□□□□□ -1.43
ABP1YCR088W YOR011W-AQ3E807 68 aa6.13□□□□□ -1.43
ABP1YCR088W URA2P07259 2214 aaKnown RBP6.12□□□□□ -1.43
ABP1YCR088W YMR317WQ04893 1140 aa6.12□□□□□ -1.43
ABP1YCR088W YER181CP40097 107 aa6.11□□□□□ -1.43
ABP1YCR088W AIM11P87275 137 aa6.11□□□□□ -1.43
ABP1YCR088W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
ABP1YCR088W YPR053CQ6Q5F3 151 aa6.11□□□□□ -1.43
ABP1YCR088W CYC7P00045 113 aa6.11□□□□□ -1.43
ABP1YCR088W YPT53P36019 220 aa6.11□□□□□ -1.43
ABP1YCR088W VHS2P40463 436 aa6.11□□□□□ -1.43
ABP1YCR088W CAX4P53223 239 aa6.11□□□□□ -1.43
ABP1YCR088W RPL42AP0CX27 106 aaKnown RBP6.1□□□□□ -1.43
ABP1YCR088W RPL42BP0CX28 106 aaKnown RBP6.1□□□□□ -1.43
ABP1YCR088W CIN5P40917 295 aa6.1□□□□□ -1.43
ABP1YCR088W CCW12Q12127 133 aa6.1□□□□□ -1.43
ABP1YCR088W YOR097CQ12274 175 aaPredicted RBP6.1□□□□□ -1.43
ABP1YCR088W YOR008C-AQ3E7B9 74 aa6.1□□□□□ -1.43
ABP1YCR088W ATP15P21306 62 aa6.09□□□□□ -1.43
ABP1YCR088W INO2P26798 304 aa6.09□□□□□ -1.43
ABP1YCR088W DCV1P43595 202 aa6.09□□□□□ -1.43
ABP1YCR088W TOS8P53147 276 aa6.09□□□□□ -1.43
ABP1YCR088W YIP3P53633 176 aa6.08□□□□□ -1.44
ABP1YCR088W VAR1P02381 398 aa6.08□□□□□ -1.44
ABP1YCR088W RPS8AP0CX39 200 aaKnown RBP6.08□□□□□ -1.44
ABP1YCR088W RPS8BP0CX40 200 aaKnown RBP6.08□□□□□ -1.44
ABP1YCR088W YER135CP40082 130 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 182.7 ms