RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	PAU22	P0CE87	164 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	YKR032W	P36127	104 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	YHL018W	P38744	120 aa	Predicted RBP	4.99	□□□□□ -1.61
UBP13	YBL067C	HUR1	P45820	110 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	YPR195C	Q06594	109 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	GSC2	P40989	1895 aa		4.98	□□□□□ -1.61
UBP13	YBL067C	FPR1	P20081	114 aa	Known RBP	4.98	□□□□□ -1.61
UBP13	YBL067C	UTR5	P32630	166 aa		4.98	□□□□□ -1.61
UBP13	YBL067C	MIX14	Q04341	121 aa		4.98	□□□□□ -1.61
UBP13	YBL067C	RPS23A	P0CX29	145 aa	Known RBP	4.97	□□□□□ -1.61
UBP13	YBL067C	RPS23B	P0CX30	145 aa		4.97	□□□□□ -1.61
UBP13	YBL067C	YER084W	P40057	128 aa		4.97	□□□□□ -1.61
UBP13	YBL067C	YFL051C	P43552	160 aa		4.97	□□□□□ -1.61
UBP13	YBL067C	DCV1	P43595	202 aa		4.97	□□□□□ -1.61
UBP13	YBL067C	YGL149W	P53116	101 aa		4.97	□□□□□ -1.61
UBP13	YBL067C	PPT2	Q12036	173 aa		4.97	□□□□□ -1.61
UBP13	YBL067C	ATP19	P81451	68 aa		4.97	□□□□□ -1.61
UBP13	YBL067C	RIF1	P29539	1916 aa		4.96	□□□□□ -1.61
UBP13	YBL067C	YHR213W	P0CI67	198 aa		4.96	□□□□□ -1.62
UBP13	YBL067C	NMA1	Q06178	401 aa	Known RBP	4.96	□□□□□ -1.62
UBP13	YBL067C	NUP159	P40477	1460 aa		4.96	□□□□□ -1.62
UBP13	YBL067C	YCR085W	P25650	117 aa		4.96	□□□□□ -1.62
UBP13	YBL067C	YGR269W	P40326	108 aa		4.96	□□□□□ -1.62
UBP13	YBL067C	MHF1	Q3E835	90 aa		4.96	□□□□□ -1.62
UBP13	YBL067C	BRP1	P53194	125 aa		4.95	□□□□□ -1.62
UBP13	YBL067C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
UBP13	YBL067C	FUN14	P18411	198 aa		4.94	□□□□□ -1.62
UBP13	YBL067C	DAD1	Q12248	94 aa		4.94	□□□□□ -1.62
UBP13	YBL067C	YMR175W-A	Q3E766	64 aa		4.94	□□□□□ -1.62
UBP13	YBL067C	MRPS9	P38120	278 aa		4.93	□□□□□ -1.62
UBP13	YBL067C	HSP10	P38910	106 aa		4.93	□□□□□ -1.62
UBP13	YBL067C	YIR020C	P40575	100 aa		4.93	□□□□□ -1.62
UBP13	YBL067C	KRE1	P17260	313 aa		4.93	□□□□□ -1.62
UBP13	YBL067C	RPL33B	P41056	107 aa	Known RBP	4.93	□□□□□ -1.62
UBP13	YBL067C	TY1B-JR2	P47100	1755 aa	Known RBP	4.92	□□□□□ -1.62
UBP13	YBL067C	TY1B-ER2	Q03619	1755 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	TY1B-MR1	Q04214	1755 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.92	□□□□□ -1.62
UBP13	YBL067C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.92	□□□□□ -1.62
UBP13	YBL067C	TY1B-NL1	Q12112	1755 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	TY1B-GR1	Q12141	1755 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	TY1B-BL	Q12490	1755 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	SVP26	P38869	228 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	YML079W	Q03629	201 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	PRM3	Q08931	133 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	YMR230W-A	Q3E7B5	62 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	PCC1	Q3E833	88 aa		4.92	□□□□□ -1.62
UBP13	YBL067C	HYR1	P40581	163 aa	Known RBP	4.91	□□□□□ -1.62
UBP13	YBL067C	FAS2	P19097	1887 aa	Known RBP	4.9	□□□□□ -1.62
UBP13	YBL067C	HAP1	P0CE41	1502 aa		4.9	□□□□□ -1.62
UBP13	YBL067C	RPA12	P32529	125 aa	Known RBP	4.9	□□□□□ -1.63
UBP13	YBL067C	PAU16	P35994	123 aa		4.9	□□□□□ -1.63
UBP13	YBL067C	UTH1	P36135	365 aa		4.9	□□□□□ -1.63
UBP13	YBL067C	YHR138C	P38841	114 aa	Predicted RBP	4.9	□□□□□ -1.63
UBP13	YBL067C	PAU15	P40585	124 aa		4.9	□□□□□ -1.63
UBP13	YBL067C	PAU5	P43575	122 aa		4.9	□□□□□ -1.63
UBP13	YBL067C	FIT2	Q08906	153 aa		4.9	□□□□□ -1.63
UBP13	YBL067C	EMC6	Q12431	108 aa		4.9	□□□□□ -1.63
UBP13	YBL067C	OST5	Q92316	86 aa		4.9	□□□□□ -1.63
UBP13	YBL067C	SSK2	P53599	1579 aa		4.89	□□□□□ -1.63
UBP13	YBL067C	ATG8	P38182	117 aa	RIP-Chip data	4.89	□□□□□ -1.63	not detected
UBP13	YBL067C	YLR194C	Q05777	254 aa		4.89	□□□□□ -1.63
UBP13	YBL067C	YPR153W	Q06537	140 aa		4.89	□□□□□ -1.63
UBP13	YBL067C	COX8	P04039	78 aa		4.89	□□□□□ -1.63
UBP13	YBL067C	RPS25B	P0C0T4	108 aa	Known RBP	4.89	□□□□□ -1.63
UBP13	YBL067C	NRG2	P38082	220 aa		4.89	□□□□□ -1.63
UBP13	YBL067C	AVO2	Q04749	426 aa		4.88	□□□□□ -1.63
UBP13	YBL067C	COX23	P38824	151 aa		4.88	□□□□□ -1.63
UBP13	YBL067C	RPL22B	P56628	122 aa	Known RBP	4.88	□□□□□ -1.63
UBP13	YBL067C	DAD4	P69851	72 aa		4.88	□□□□□ -1.63
UBP13	YBL067C	ICY1	Q04329	127 aa		4.88	□□□□□ -1.63
UBP13	YBL067C	YLR363W-A	Q3E747	85 aa		4.88	□□□□□ -1.63
UBP13	YBL067C	YNL162W-A	Q3E7A8	72 aa		4.88	□□□□□ -1.63
UBP13	YBL067C	GCV3	P39726	170 aa	Predicted RBP	4.87	□□□□□ -1.63
UBP13	YBL067C	YPI1	P43587	155 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-LR1	P0C2J3	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-F	P0CX63	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-GR2	P0CX64	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-C	P25384	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-DR2	Q03494	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-OR1	Q12113	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-DR1	Q12472	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-B	Q12491	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	TY2B-OR2	Q12501	1770 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	PAI3	P01094	68 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	CDC39	P25655	2108 aa	Known RBP	4.87	□□□□□ -1.63
UBP13	YBL067C	HSP150	P32478	413 aa		4.87	□□□□□ -1.63
UBP13	YBL067C	SEC11	P15367	167 aa		4.86	□□□□□ -1.63
UBP13	YBL067C	YJR146W	P47174	117 aa		4.86	□□□□□ -1.63
UBP13	YBL067C	SNN1	P48232	102 aa		4.86	□□□□□ -1.63
UBP13	YBL067C	SUS1	Q6WNK7	96 aa		4.86	□□□□□ -1.63
UBP13	YBL067C	YFL012W	P43580	148 aa		4.85	□□□□□ -1.63
UBP13	YBL067C	NAT5	Q08689	176 aa		4.85	□□□□□ -1.63
UBP13	YBL067C	VMA21	P41806	77 aa		4.85	□□□□□ -1.63
UBP13	YBL067C	RGM1	Q00453	211 aa		4.85	□□□□□ -1.63
UBP13	YBL067C	GRX5	Q02784	150 aa		4.85	□□□□□ -1.63
UBP13	YBL067C	VPS68	Q12016	184 aa		4.85	□□□□□ -1.63
UBP13	YBL067C	ENV10	Q99382	181 aa		4.85	□□□□□ -1.63
UBP13	YBL067C	CDC25	P04821	1589 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms