RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W TOS8P53147 276 aa2.63□□□□□ -1.99
NUP60YAR002W YGR017WP53210 297 aa2.63□□□□□ -1.99
NUP60YAR002W YGR025WP53216 100 aa2.63□□□□□ -1.99
NUP60YAR002W GPI19Q04082 140 aa2.63□□□□□ -1.99
NUP60YAR002W SPG4Q04438 115 aa2.63□□□□□ -1.99
NUP60YAR002W HOR7Q05827 59 aa2.63□□□□□ -1.99
NUP60YAR002W SRL1Q08673 210 aa2.63□□□□□ -1.99
NUP60YAR002W YDL157CQ12082 118 aa2.63□□□□□ -1.99
NUP60YAR002W TIM22Q12328 207 aa2.63□□□□□ -1.99
NUP60YAR002W URA2P07259 2214 aaKnown RBP2.62□□□□□ -1.99
NUP60YAR002W YFL068WP0CX99 160 aa2.62□□□□□ -1.99
NUP60YAR002W YLL066W-AP0CY00 160 aa2.62□□□□□ -1.99
NUP60YAR002W YLL067W-AP0CY01 160 aa2.62□□□□□ -1.99
NUP60YAR002W YKR032WP36127 104 aa2.62□□□□□ -1.99
NUP60YAR002W YHR140WP38842 239 aa2.62□□□□□ -1.99
NUP60YAR002W PET8P38921 284 aa2.62□□□□□ -1.99
NUP60YAR002W YER188WP40103 239 aa2.62□□□□□ -1.99
NUP60YAR002W MST27P53176 234 aa2.62□□□□□ -1.99
NUP60YAR002W POP3P53833 195 aaPredicted RBP2.62□□□□□ -1.99
NUP60YAR002W YLR281CQ05863 155 aa2.62□□□□□ -1.99
NUP60YAR002W YPL162CQ12042 273 aa2.62□□□□□ -1.99
NUP60YAR002W HTL1Q9URQ5 78 aa2.62□□□□□ -1.99
NUP60YAR002W CUP1-1P0CX80 61 aa2.61□□□□□ -1.99
NUP60YAR002W CUP1-2P0CX81 61 aa2.61□□□□□ -1.99
NUP60YAR002W SEC11P15367 167 aa2.61□□□□□ -1.99
NUP60YAR002W MIG1P27705 504 aa2.61□□□□□ -1.99
NUP60YAR002W RPB9P27999 122 aa2.61□□□□□ -1.99
NUP60YAR002W YBR144CP34215 104 aa2.61□□□□□ -1.99
NUP60YAR002W HAC1P41546 238 aa2.61□□□□□ -1.99
NUP60YAR002W GLC8P41818 229 aa2.61□□□□□ -1.99
NUP60YAR002W YGL230CP53074 147 aa2.61□□□□□ -1.99
NUP60YAR002W YIL014C-AQ02598 104 aa2.61□□□□□ -1.99
NUP60YAR002W DPP1Q05521 289 aa2.61□□□□□ -1.99
NUP60YAR002W ATG39Q06159 398 aa2.61□□□□□ -1.99
NUP60YAR002W MHR1Q06630 226 aa2.61□□□□□ -1.99
NUP60YAR002W YPR013CQ12145 317 aa2.61□□□□□ -1.99
NUP60YAR002W YLR050CQ12155 161 aaKnown RBP2.61□□□□□ -1.99
NUP60YAR002W YPR014CQ6B0W2 109 aa2.61□□□□□ -1.99
NUP60YAR002W RPL15AP05748 204 aaKnown RBP2.6□□□□□ -1.99
NUP60YAR002W YCR007CP25354 239 aa2.6□□□□□ -1.99
NUP60YAR002W YCR041WP37265 110 aa2.6□□□□□ -1.99
NUP60YAR002W YHR022CP38763 256 aa2.6□□□□□ -1.99
NUP60YAR002W FYV4P38783 130 aaPredicted RBP2.6□□□□□ -1.99
NUP60YAR002W MST28P39552 234 aa2.6□□□□□ -1.99
NUP60YAR002W MSL1P40567 111 aaPredicted RBP2.6□□□□□ -1.99
NUP60YAR002W MRPL49P40858 161 aaPredicted RBP2.6□□□□□ -1.99
NUP60YAR002W CAX4P53223 239 aa2.6□□□□□ -1.99
NUP60YAR002W DIA1P54005 336 aa2.6□□□□□ -1.99
NUP60YAR002W GRH1Q04410 372 aaKnown RBP2.6□□□□□ -1.99
NUP60YAR002W MSC3Q05812 728 aa2.6□□□□□ -1.99
NUP60YAR002W PAU23Q07987 124 aa2.6□□□□□ -1.99
NUP60YAR002W CCW12Q12127 133 aa2.6□□□□□ -1.99
NUP60YAR002W PAU17Q12370 124 aa2.6□□□□□ -1.99
NUP60YAR002W PRM7Q12459 698 aa2.6□□□□□ -1.99
NUP60YAR002W YNL146C-AQ3E7Z1 64 aa2.6□□□□□ -1.99
NUP60YAR002W SCS22Q6Q595 175 aa2.6□□□□□ -1.99
NUP60YAR002W RPL31AP0C2H8 113 aaKnown RBP2.6□□□□□ -1.99
NUP60YAR002W YCR023CP25351 611 aa2.6□□□□□ -1.99
NUP60YAR002W AGA1P32323 725 aa2.6□□□□□ -1.99
NUP60YAR002W UTR5P32630 166 aa2.6□□□□□ -1.99
NUP60YAR002W RPL32P38061 130 aaKnown RBP2.6□□□□□ -1.99
NUP60YAR002W YIP3P53633 176 aa2.6□□□□□ -1.99
NUP60YAR002W MGR2Q02889 113 aa2.6□□□□□ -1.99
NUP60YAR002W YDR042CQ03205 200 aa2.6□□□□□ -1.99
NUP60YAR002W RRG8Q06109 277 aa2.6□□□□□ -1.99
NUP60YAR002W YOR011W-AQ3E807 68 aa2.6□□□□□ -1.99
NUP60YAR002W PFY1P07274 126 aa2.59□□□□□ -1.99
NUP60YAR002W RPL27BP0C2H7 136 aaKnown RBP2.59□□□□□ -1.99
NUP60YAR002W HAP3P13434 144 aa2.59□□□□□ -1.99
NUP60YAR002W YER076CP40049 302 aa2.59□□□□□ -1.99
NUP60YAR002W KEG1P43614 200 aa2.59□□□□□ -1.99
NUP60YAR002W VPS71Q03433 280 aa2.59□□□□□ -1.99
NUP60YAR002W BET5Q03630 159 aa2.59□□□□□ -1.99
NUP60YAR002W TVP18Q04767 167 aa2.59□□□□□ -1.99
NUP60YAR002W PRM3Q08931 133 aa2.59□□□□□ -1.99
NUP60YAR002W YOL085CQ99345 113 aa2.59□□□□□ -1.99
NUP60YAR002W NUM1Q00402 2748 aa2.59□□□□□ -2
NUP60YAR002W SAL1D6W196 494 aa2.58□□□□□ -2
NUP60YAR002W VAR1P02381 398 aa2.58□□□□□ -2
NUP60YAR002W PRE1P22141 198 aaKnown RBP2.58□□□□□ -2
NUP60YAR002W YCR043CP25361 127 aa2.58□□□□□ -2
NUP60YAR002W KTI12P34253 313 aaKnown RBP2.58□□□□□ -2
NUP60YAR002W APS1P35181 156 aa2.58□□□□□ -2
NUP60YAR002W SIM1P40472 476 aa2.58□□□□□ -2
NUP60YAR002W FIP1P45976 327 aa2.58□□□□□ -2
NUP60YAR002W FCF1Q05498 189 aaPredicted RBP2.58□□□□□ -2
NUP60YAR002W MRPL23Q12487 163 aaPredicted RBP2.58□□□□□ -2
NUP60YAR002W YBR200W-AQ3E755 54 aa2.58□□□□□ -2
NUP60YAR002W YKR070WP36151 352 aaKnown RBP2.57□□□□□ -2
NUP60YAR002W YER135CP40082 130 aa2.57□□□□□ -2
NUP60YAR002W TOS6P48560 102 aa2.57□□□□□ -2
NUP60YAR002W YMR244WQ04018 355 aa2.57□□□□□ -2
NUP60YAR002W YMR103CQ04436 120 aa2.57□□□□□ -2
NUP60YAR002W TAR1Q8TGM6 124 aa2.57□□□□□ -2
NUP60YAR002W CCW14O13547 238 aa2.57□□□□□ -2
NUP60YAR002W HMRA2P0CY13 119 aa2.57□□□□□ -2
NUP60YAR002W RPL16BP26785 198 aaKnown RBP2.57□□□□□ -2
NUP60YAR002W YKL044WP36092 106 aa2.57□□□□□ -2
NUP60YAR002W MIG3P39943 394 aa2.57□□□□□ -2
NUP60YAR002W MIC26P50087 233 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms