RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CCNG2Q16589 344 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 EDRF1Q3B7T1 1238 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 ZCWPW2Q504Y3 356 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 HERC4Q5GLZ8 1057 aaPredicted RBP12.25□□□□□ -0.45
LINC00538-201ENST00000626109 HECTD3Q5T447 861 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 KIAA0319Q5VV43 1072 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 ITPRIPL1Q6GPH6 555 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 ENOSF1Q7L5Y1 443 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 RHPN2Q8IUC4 686 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 TMEM151BQ8IW70 566 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 FAM126BQ8IXS8 530 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 NRSN1Q8IZ57 195 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 KIAA0319LQ8IZA0 1049 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 DAW1Q8N136 415 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 MYCT1Q8N699 235 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 SPATA4Q8NEY3 305 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 PPP1R14CQ8TAE6 165 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 DNAJB3Q8WWF6 145 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 CRB3Q9BUF7 120 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 TRPV6Q9H1D0 765 aa12.25□□□□□ -0.45
LINC00538-201ENST00000626109 KAT6AQ92794 2004 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 A0A1B0GVC2 190 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 A6NNZ2 444 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 DCDC2CA8MYV0 355 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 M0R3H8 397 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 PDE2AO00408 941 aaPredicted RBP12.24□□□□□ -0.45
LINC00538-201ENST00000626109 CETN3O15182 167 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 EPHB6O15197 1021 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 OPA1O60313 960 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 ATP6V1B1P15313 513 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 NPR3P17342 541 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 MXI1P50539 228 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 CDC42EP1Q00587 391 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 TFDP1Q14186 410 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 ASTE1Q2TB18 679 aaPredicted RBP12.24□□□□□ -0.45
LINC00538-201ENST00000626109 TRIM60Q495X7 471 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 SLC6A19Q695T7 634 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 ANKRD33Q7Z3H0 272 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 SFR1Q86XK3 245 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 ASAP3Q8TDY4 903 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 PRPF31Q8WWY3 499 aaKnown RBP12.24□□□□□ -0.45
LINC00538-201ENST00000626109 RSRC1Q96IZ7 334 aaKnown RBP12.24□□□□□ -0.45
LINC00538-201ENST00000626109 RADILQ96JH8 1075 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 RMDN2Q96LZ7 410 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 TOX2Q96NM4 488 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 NACA2Q9H009 215 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 FAM204AQ9H8W3 233 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 VPS45Q9NRW7 570 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 WDR35Q9P2L0 1181 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 ATP11BQ9Y2G3 1177 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 CAPN6Q9Y6Q1 641 aa12.24□□□□□ -0.45
LINC00538-201ENST00000626109 CCDC169A6NNP5 214 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 M0QZ92 97 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 TULP2O00295 520 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 GABRDO14764 452 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 XPOTO43592 962 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 FZD6O60353 706 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 PHACTR2O75167 634 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 VTNP04004 478 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 DNTTP04053 509 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 CYP17A1P05093 508 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 GLRA2P23416 452 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 NAMPTP43490 491 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 SMTNP53814 917 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 EPHB4P54760 987 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 PEX3P56589 373 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 RAC1P63000 192 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 LAMTOR4Q0VGL1 99 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 KCNMA1Q12791 1236 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 PPP2R5EQ16537 467 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 EMBQ6PCB8 327 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 TRIM74Q86UV6 250 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 TRIM73Q86UV7 250 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 SLC41A1Q8IVJ1 513 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 FAM178BQ8IXR5 827 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 SLC17A8Q8NDX2 589 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 LSM14BQ9BX40 385 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 KCTD10Q9H3F6 313 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 PAPOLBQ9NRJ5 636 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 EIF2B4Q9UI10 523 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 LAMP5Q9UJQ1 280 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 BZW2Q9Y6E2 419 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 FAM221AA4D161 298 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 GRID2IPA4D2P6 1211 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 LRRIQ4A6NIV6 560 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 GOLGA8KD6RF30 607 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 AHCYL1O43865 530 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 SYF2O95926 243 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 CPP00450 1065 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 TNFRSF8P28908 595 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 POLR2FP61218 127 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 TLE2Q04725 743 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 GFPT1Q06210 699 aaPredicted RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 ADAM9Q13443 819 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 SEMA3AQ14563 771 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 IFI16Q16666 785 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 LRRC26Q2I0M4 334 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 ALS2CLQ60I27 953 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms