RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CHRDQ9H2X0 955 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 SNX25Q9H3E2 840 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 SEMA4AQ9H3S1 761 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 KIF9Q9HAQ2 790 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 LMAN1LQ9HAT1 526 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 PRMT8Q9NR22 394 aaPredicted RBP9.64□□□□□ -0.87
USF1-204ENST00000472217 TDP1Q9NUW8 608 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 THG1LQ9NWX6 298 aaKnown RBP9.64□□□□□ -0.87
USF1-204ENST00000472217 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
USF1-204ENST00000472217 FANCMQ8IYD8 2048 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 ZFHX2Q9C0A1 2572 aaPredicted RBP9.63□□□□□ -0.87
USF1-204ENST00000472217 GREB1Q4ZG55 1949 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 SOBPA7XYQ1 873 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 A8MXQ7 604 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 RHOBTB3O94955 611 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 CLSTN1O94985 981 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 VNN1O95497 513 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 LMNAP02545 664 aaKnown RBP9.63□□□□□ -0.87
USF1-204ENST00000472217 C4BPAP04003 597 aaKnown RBP9.63□□□□□ -0.87
USF1-204ENST00000472217 CHRNB1P11230 501 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 PTPN1P18031 435 aaKnown RBP9.63□□□□□ -0.87
USF1-204ENST00000472217 GRIK1P39086 918 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 ZNF699Q32M78 642 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 C1orf228Q6PIY5 440 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 TSSK4Q6SA08 328 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 RALGPS2Q86X27 583 aaPredicted RBP9.63□□□□□ -0.87
USF1-204ENST00000472217 B3GALNT2Q8NCR0 500 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 OR6B3Q8NGW1 331 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 ELMO3Q96BJ8 720 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 SPATA17Q96L03 361 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 SLC22A12Q96S37 553 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 CYP2S1Q96SQ9 504 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 IER2Q9BTL4 223 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 DPEP3Q9H4B8 488 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 VRTNQ9H8Y1 702 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 TRPC7Q9HCX4 862 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 GKN1Q9NS71 199 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 RBM12Q9NTZ6 932 aaKnown RBP9.63□□□□□ -0.87
USF1-204ENST00000472217 TMEM30AQ9NV96 361 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 TRAF3IP3Q9Y228 551 aa9.63□□□□□ -0.87
USF1-204ENST00000472217 C2orf78A6NCI8 922 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 F8VP50 259 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 KINO60870 393 aaKnown RBP9.62□□□□□ -0.87
USF1-204ENST00000472217 ZNF202O95125 648 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 KIF20AO95235 890 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 FAM163BP0C2L3 166 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 USP17L7P0C7H9 530 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 ANXA13P27216 316 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 RAP1GAPP47736 663 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 AP3M2P53677 418 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 CACNA2D1P54289 1103 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 CDH8P55286 799 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 USP46P62068 366 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 USP4Q13107 963 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 NCOA4Q13772 614 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 GAS6Q14393 721 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 ZNF268Q14587 947 aaPredicted RBP9.62□□□□□ -0.87
USF1-204ENST00000472217 PON2Q15165 354 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 ITPRIPL2Q3MIP1 535 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 ZNF667Q5HYK9 610 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 CEP135Q66GS9 1140 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 TRIM68Q6AZZ1 485 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 SCARA5Q6ZMJ2 495 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 DENND5BQ6ZUT9 1274 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 SUMF1Q8NBK3 374 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 ZBTB44Q8NCP5 570 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 TMC2Q8TDI7 906 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 NELL1Q92832 810 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 CCDC47Q96A33 483 aaKnown RBP9.62□□□□□ -0.87
USF1-204ENST00000472217 CHFRQ96EP1 664 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 C8orf48Q96LL4 319 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 CEP295NLQ96MC4 621 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 FAM83CQ9BQN1 747 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 TTLL2Q9BWV7 592 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 ZNF518BQ9C0D4 1074 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 SDCBP2Q9H190 292 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 SMYD3Q9H7B4 428 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 HPS4Q9NQG7 708 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 GCNT4Q9P109 453 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 MAPK8IP1Q9UQF2 711 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 PCDHGA2Q9Y5H1 932 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
USF1-204ENST00000472217 ANAPC1Q9H1A4 1944 aa9.62□□□□□ -0.87
USF1-204ENST00000472217 TRAV19A0A0A6YYK7 116 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 OTOL1A6NHN0 477 aaPredicted RBP9.61□□□□□ -0.87
USF1-204ENST00000472217 CLDN5O00501 218 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 TRIM66O15016 1216 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 MAPK13O15264 365 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 CALUO43852 315 aaPredicted RBP9.61□□□□□ -0.87
USF1-204ENST00000472217 AKAP3O75969 853 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 CKMP06732 381 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 TDGF1P13385 188 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 ARSAP15289 507 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 NR2F2P24468 414 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 PIK3CAP42336 1068 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 NOP14P78316 857 aaKnown RBP9.61□□□□□ -0.87
USF1-204ENST00000472217 SATB1Q01826 763 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
USF1-204ENST00000472217 RUNX3Q13761 415 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms