RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 DTX3Q8N9I9 347 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TTC13Q8NBP0 860 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TSPAN14Q8NG11 270 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 SH3RF3Q8TEJ3 882 aaPredicted RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 CIDECQ96AQ7 238 aaPredicted RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 SGK3Q96BR1 496 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 MAP6Q96JE9 813 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 EPB41L4BQ9H329 900 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 LRRC4CQ9HCJ2 640 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 FANCFQ9NPI8 374 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 KIF17Q9P2E2 1029 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 AMACRQ9UHK6 382 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 EMSYQ7Z589 1322 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TRAV6A0A075B6T7 132 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 ATP6V1G2-DDX39BF2Z307 99 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 NOL3O60936 208 aaKnown RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 CSDE1O75534 798 aaKnown RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 FGF18O76093 207 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 C6orf222P0C671 652 aaPredicted RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 CD53P19397 219 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 PTPREP23469 700 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 SLC26A2P50443 739 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 EVA1CP58658 441 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 ZNF33BQ06732 778 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TRIP10Q15642 601 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 KCNT1Q5JUK3 1230 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 SLC10A5Q5PT55 438 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 PLEKHA7Q6IQ23 1121 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TTI2Q6NXR4 508 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 VPS37DQ86XT2 251 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TBC1D15Q8TC07 691 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 LRRC2Q9BYS8 371 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 LRRC4BQ9NT99 713 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 SUCOQ9UBS9 1254 aaKnown RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 ANAPC5Q9UJX4 755 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 CPQQ9Y646 472 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 WDR91A4D1P6 747 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 BTBD18B2RXH4 712 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 PSMD12O00232 456 aaPredicted RBP8.96□□□□□ -0.97
TDP1-201ENST00000335725 VWA5AO00534 786 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 EDF1O60869 148 aaKnown RBP8.96□□□□□ -0.97
TDP1-201ENST00000335725 TM7SF2O76062 418 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 FTCDO95954 541 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 IFNA14P01570 189 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 INHBBP09529 407 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 KRT10P13645 584 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 ZNF3P17036 446 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 NR4A1P22736 598 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 ST13P50502 369 aaKnown RBP8.96□□□□□ -0.97
TDP1-201ENST00000335725 GPR85P60893 370 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 SPARCL1Q14515 664 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 ALFQ53S48 1182 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 FAM171BQ6P995 826 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 GPR180Q86V85 440 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 SIMC1Q8NDZ2 872 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 FLCNQ8NFG4 579 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 PSPC1Q8WXF1 523 aaKnown RBP8.96□□□□□ -0.97
TDP1-201ENST00000335725 RANBP9Q96S59 729 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 CDK5RAP1Q96SZ6 601 aaKnown RBP8.96□□□□□ -0.97
TDP1-201ENST00000335725 NAP1L4Q99733 375 aaKnown RBP8.96□□□□□ -0.97
TDP1-201ENST00000335725 LIN28AQ9H9Z2 209 aaKnown RBP8.96□□□□□ -0.97
TDP1-201ENST00000335725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.96□□□□□ -0.97
TDP1-201ENST00000335725 PPM1HQ9ULR3 514 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 TAF6LQ9Y6J9 622 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 STON1Q9Y6Q2 735 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 SAMD9LQ8IVG5 1584 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 SSU72P8A0A1W2PR75 194 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 FAM25AB3EWG3 89 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 FAM25CB3EWG5 89 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 FAM25GB3EWG6 89 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 H3BRJ5 948 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 hCG_2039718K7EN88 272 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 KRT8P05787 483 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 PSMA3P25788 255 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 RHAGQ02094 409 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 KDSRQ06136 332 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 NAB2Q15742 525 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 LRRC36Q1X8D7 754 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 TNNI3KQ59H18 835 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 ZNF618Q5T7W0 954 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 C2CD5Q86YS7 1000 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 TRIM59Q8IWR1 403 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 FAM109AQ8N4B1 249 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 LHFPL5Q8TAF8 219 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 ZNF420Q8TAQ5 688 aaPredicted RBP8.96□□□□□ -0.97
TDP1-201ENST00000335725 KRT35Q92764 455 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 TNIP3Q96KP6 325 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 CDRT15Q96T59 188 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 GON7Q9BXV9 100 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 TAS2R7Q9NYW3 318 aa8.96□□□□□ -0.97
TDP1-201ENST00000335725 A0A0D9SFI3 127 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 OR5K3A6NET4 321 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 TRPC5OSA6NMA1 111 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 SERPINI2O75830 405 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 NCOA4Q13772 614 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 TLR1Q15399 786 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 FBXO43Q4G163 708 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 IYDQ6PHW0 289 aa8.96□□□□□ -0.98
TDP1-201ENST00000335725 KYAT3Q6YP21 454 aaKnown RBP8.96□□□□□ -0.98
TDP1-201ENST00000335725 TRMT10CQ7L0Y3 403 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms