RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W NQM1P53228 333 aaPredicted RBP0.95□□□□□ -2.26
BRO1YPL084W YML079WQ03629 201 aa0.95□□□□□ -2.26
BRO1YPL084W KRE5P22023 1365 aa0.95□□□□□ -2.26
BRO1YPL084W AHT1P29589 182 aa0.95□□□□□ -2.26
BRO1YPL084W MRPL15P36523 253 aa0.95□□□□□ -2.26
BRO1YPL084W YGR269WP40326 108 aa0.95□□□□□ -2.26
BRO1YPL084W YMR007WQ03675 126 aa0.95□□□□□ -2.26
BRO1YPL084W AVO2Q04749 426 aa0.95□□□□□ -2.26
BRO1YPL084W YDL157CQ12082 118 aa0.95□□□□□ -2.26
BRO1YPL084W ATP5P09457 212 aa0.94□□□□□ -2.26
BRO1YPL084W CCC1P47818 322 aa0.94□□□□□ -2.26
BRO1YPL084W RPL37AP49166 88 aaKnown RBP0.94□□□□□ -2.26
BRO1YPL084W LSM3P57743 89 aaKnown RBP0.94□□□□□ -2.26
BRO1YPL084W UIP4Q08926 304 aa0.94□□□□□ -2.26
BRO1YPL084W SLM6P38343 150 aa0.94□□□□□ -2.26
BRO1YPL084W RPL30P14120 105 aaKnown RBP0.93□□□□□ -2.26
BRO1YPL084W UBC8P28263 218 aa0.93□□□□□ -2.26
BRO1YPL084W UBC6P33296 250 aaPredicted RBP0.93□□□□□ -2.26
BRO1YPL084W DER1P38307 211 aa0.93□□□□□ -2.26
BRO1YPL084W YHL037CP38733 133 aa0.93□□□□□ -2.26
BRO1YPL084W FIT1Q04433 528 aa0.93□□□□□ -2.26
BRO1YPL084W YDL241WQ07738 123 aa0.93□□□□□ -2.26
BRO1YPL084W YPR203WQ08994 102 aa0.93□□□□□ -2.26
BRO1YPL084W SLH1P53327 1967 aaKnown RBP0.93□□□□□ -2.26
BRO1YPL084W HTD2P38790 280 aaKnown RBP0.93□□□□□ -2.26
BRO1YPL084W YDR102CQ03864 110 aa0.93□□□□□ -2.26
BRO1YPL084W ATG10Q07879 167 aa0.93□□□□□ -2.26
BRO1YPL084W SPS2P08459 502 aa0.92□□□□□ -2.26
BRO1YPL084W PEX34P25584 144 aa0.92□□□□□ -2.26
BRO1YPL084W YPT31P38555 223 aaKnown RBP0.92□□□□□ -2.26
BRO1YPL084W DLS1P40366 167 aa0.92□□□□□ -2.26
BRO1YPL084W APQ12P40532 138 aa0.92□□□□□ -2.26
BRO1YPL084W YFL051CP43552 160 aa0.92□□□□□ -2.26
BRO1YPL084W YGL193CP53097 103 aa0.92□□□□□ -2.26
BRO1YPL084W YNR064CP53750 290 aa0.92□□□□□ -2.26
BRO1YPL084W YPR114WQ06107 315 aa0.92□□□□□ -2.26
BRO1YPL084W SMD2Q06217 110 aaKnown RBP0.92□□□□□ -2.26
BRO1YPL084W NSL1Q12143 216 aa0.92□□□□□ -2.26
BRO1YPL084W TEL1P38110 2787 aa0.92□□□□□ -2.26
BRO1YPL084W INO4P13902 151 aa0.91□□□□□ -2.26
BRO1YPL084W BUB2P26448 306 aaPredicted RBP0.91□□□□□ -2.26
BRO1YPL084W SRP102P36057 244 aaPredicted RBP0.91□□□□□ -2.26
BRO1YPL084W FIP1P45976 327 aa0.91□□□□□ -2.26
BRO1YPL084W SHB17P36136 271 aaKnown RBP0.91□□□□□ -2.26
BRO1YPL084W EFG1Q3E705 233 aaKnown RBP0.91□□□□□ -2.26
BRO1YPL084W RPS25BP0C0T4 108 aaKnown RBP0.9□□□□□ -2.26
BRO1YPL084W PBI2P0CT04 75 aaKnown RBP0.9□□□□□ -2.26
BRO1YPL084W FIG1P38224 298 aa0.9□□□□□ -2.26
BRO1YPL084W RPS25AQ3E792 108 aaPredicted RBP0.9□□□□□ -2.26
BRO1YPL084W PRE1P22141 198 aaKnown RBP0.9□□□□□ -2.27
BRO1YPL084W ARC19P33204 171 aaKnown RBP0.9□□□□□ -2.27
BRO1YPL084W UTP20P35194 2493 aaKnown RBP0.89□□□□□ -2.27
BRO1YPL084W MRS4P23500 304 aa0.89□□□□□ -2.27
BRO1YPL084W CIN5P40917 295 aa0.89□□□□□ -2.27
BRO1YPL084W GEP7P53171 287 aa0.89□□□□□ -2.27
BRO1YPL084W ADE6P38972 1358 aaKnown RBP0.88□□□□□ -2.27
BRO1YPL084W PET20Q99373 253 aa0.88□□□□□ -2.27
BRO1YPL084W YKR070WP36151 352 aaKnown RBP0.88□□□□□ -2.27
BRO1YPL084W YEL014CP39999 101 aa0.88□□□□□ -2.27
BRO1YPL084W YGL230CP53074 147 aa0.88□□□□□ -2.27
BRO1YPL084W CMC4Q3E7A9 73 aa0.88□□□□□ -2.27
BRO1YPL084W SPT14P32363 452 aa0.87□□□□□ -2.27
BRO1YPL084W YJL218WP40892 196 aaKnown RBP0.87□□□□□ -2.27
BRO1YPL084W LCL2Q08045 131 aa0.87□□□□□ -2.27
BRO1YPL084W FCY1Q12178 158 aa0.87□□□□□ -2.27
BRO1YPL084W FMP27Q06179 2628 aa0.87□□□□□ -2.27
BRO1YPL084W YER181CP40097 107 aa0.87□□□□□ -2.27
BRO1YPL084W DCV1P43595 202 aa0.87□□□□□ -2.27
BRO1YPL084W YPD1Q07688 167 aa0.87□□□□□ -2.27
BRO1YPL084W DYN1P36022 4092 aa0.87□□□□□ -2.27
BRO1YPL084W HSP150P32478 413 aa0.86□□□□□ -2.27
BRO1YPL084W YDC1Q02896 317 aa0.86□□□□□ -2.27
BRO1YPL084W RIF1P29539 1916 aa0.86□□□□□ -2.27
BRO1YPL084W KIN28P06242 306 aa0.86□□□□□ -2.27
BRO1YPL084W PHO13P19881 312 aa0.86□□□□□ -2.27
BRO1YPL084W YAR064WP39563 99 aa0.86□□□□□ -2.27
BRO1YPL084W RPL37BP51402 88 aaKnown RBP0.86□□□□□ -2.27
BRO1YPL084W RCF2P53721 224 aa0.86□□□□□ -2.27
BRO1YPL084W NMA1Q06178 401 aaKnown RBP0.86□□□□□ -2.27
BRO1YPL084W HFA1P32874 2273 aa0.85□□□□□ -2.27
BRO1YPL084W FMN1Q03778 218 aa0.85□□□□□ -2.27
BRO1YPL084W RFU1Q08003 200 aa0.85□□□□□ -2.27
BRO1YPL084W CCW12Q12127 133 aa0.85□□□□□ -2.27
BRO1YPL084W YGL041W-AP0C5N3 154 aa0.85□□□□□ -2.27
BRO1YPL084W MRPL24P36525 258 aaPredicted RBP0.85□□□□□ -2.27
BRO1YPL084W GLC8P41818 229 aa0.85□□□□□ -2.27
BRO1YPL084W KEI1Q06346 221 aa0.85□□□□□ -2.27
BRO1YPL084W RRT7Q07829 113 aa0.85□□□□□ -2.27
BRO1YPL084W TOR2P32600 2474 aaKnown RBP0.85□□□□□ -2.27
BRO1YPL084W PMD1P32634 1753 aa0.85□□□□□ -2.27
BRO1YPL084W PET54P10834 293 aa0.84□□□□□ -2.27
BRO1YPL084W YBR027CP38220 110 aa0.84□□□□□ -2.27
BRO1YPL084W YJR015WP47090 510 aa0.84□□□□□ -2.27
BRO1YPL084W IRC19Q07843 230 aa0.84□□□□□ -2.27
BRO1YPL084W VAM10Q08474 114 aa0.84□□□□□ -2.27
BRO1YPL084W SEN1Q00416 2231 aaKnown RBP0.84□□□□□ -2.28
BRO1YPL084W QCR6P00127 147 aa0.84□□□□□ -2.28
BRO1YPL084W SRP21P32342 167 aa0.84□□□□□ -2.28
BRO1YPL084W APS3P47064 194 aa0.84□□□□□ -2.28
BRO1YPL084W ECM31P38122 312 aa0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms