RNA–Protein interactions for RNA: YOR341W

RPA190, Transcript of RNA polymerase I largest subunit A190, yeastyeast

Gene RPA190, Length 4,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA190YOR341W TY1A-LR3P0CX75 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-ML2P0CX76 440 aa2.35□□□□□ -2.03
RPA190YOR341W RRT13P40042 185 aa2.35□□□□□ -2.03
RPA190YOR341W YAR1P46683 200 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-JR2P47099 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-DR1Q03856 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-ML1Q04706 440 aaKnown RBP2.35□□□□□ -2.03
RPA190YOR341W ATG41Q12048 136 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-GR1Q12085 440 aa2.35□□□□□ -2.03
RPA190YOR341W ATO3Q12359 275 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-DR3Q12441 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-NL2Q12470 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-GR2Q12485 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.35□□□□□ -2.03
RPA190YOR341W TY1A-OLQ92392 440 aaKnown RBP2.35□□□□□ -2.03
RPA190YOR341W MMS2P53152 137 aa2.35□□□□□ -2.03
RPA190YOR341W YGR050CP53231 118 aa2.35□□□□□ -2.03
RPA190YOR341W SYM1Q06563 197 aa2.35□□□□□ -2.03
RPA190YOR341W STF2P16965 84 aa2.35□□□□□ -2.03
RPA190YOR341W SRB6P32570 121 aa2.35□□□□□ -2.03
RPA190YOR341W UGX2P32772 223 aa2.35□□□□□ -2.03
RPA190YOR341W YMR175W-AQ3E766 64 aa2.35□□□□□ -2.03
RPA190YOR341W YNL217WP40152 326 aa2.34□□□□□ -2.03
RPA190YOR341W YML079WQ03629 201 aa2.34□□□□□ -2.03
RPA190YOR341W YMR253CQ04835 414 aa2.34□□□□□ -2.03
RPA190YOR341W YLR042CQ07990 161 aa2.34□□□□□ -2.03
RPA190YOR341W FAS1P07149 2051 aaKnown RBP2.34□□□□□ -2.03
RPA190YOR341W PAU1P0CE88 120 aa2.34□□□□□ -2.03
RPA190YOR341W PAU14P0CE89 120 aa2.34□□□□□ -2.03
RPA190YOR341W PAU6P0CE90 120 aa2.34□□□□□ -2.03
RPA190YOR341W PAU18P0CE91 120 aa2.34□□□□□ -2.03
RPA190YOR341W PAU8P0CE92 120 aa2.34□□□□□ -2.03
RPA190YOR341W PAU11P0CE93 120 aa2.34□□□□□ -2.03
RPA190YOR341W CUP2P15315 225 aa2.34□□□□□ -2.03
RPA190YOR341W MRPS9P38120 278 aa2.34□□□□□ -2.03
RPA190YOR341W PAU13P38725 120 aa2.34□□□□□ -2.03
RPA190YOR341W PAU10Q03050 120 aa2.34□□□□□ -2.03
RPA190YOR341W PAU20Q08322 120 aa2.34□□□□□ -2.03
RPA190YOR341W PAU9Q3E770 120 aa2.34□□□□□ -2.03
RPA190YOR341W HMRA1P0CY11 126 aa2.34□□□□□ -2.03
RPA190YOR341W PRE5P40302 234 aaKnown RBP2.34□□□□□ -2.03
RPA190YOR341W ARC15P40518 154 aaRIP-Chip data2.34□□□□□ -2.03not detected
RPA190YOR341W KNH1P50112 268 aa2.34□□□□□ -2.03
RPA190YOR341W CWC27Q02770 301 aa2.34□□□□□ -2.03
RPA190YOR341W YMR181CQ03231 154 aa2.34□□□□□ -2.03
RPA190YOR341W DXO1Q06349 442 aa2.34□□□□□ -2.03
RPA190YOR341W DGA1Q08650 418 aa2.34□□□□□ -2.03
RPA190YOR341W YOR192C-CQ3E736 78 aa2.34□□□□□ -2.03
RPA190YOR341W YKR041WP36134 250 aa2.34□□□□□ -2.04
RPA190YOR341W SPC25P40014 221 aa2.34□□□□□ -2.04
RPA190YOR341W AVO2Q04749 426 aa2.34□□□□□ -2.04
RPA190YOR341W PBA1Q05778 276 aa2.34□□□□□ -2.04
RPA190YOR341W MRP10O75012 95 aa2.33□□□□□ -2.04
RPA190YOR341W APS1P35181 156 aa2.33□□□□□ -2.04
RPA190YOR341W PAU4P53427 120 aa2.33□□□□□ -2.04
RPA190YOR341W GIM5Q04493 163 aa2.33□□□□□ -2.04
RPA190YOR341W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
RPA190YOR341W TSC3Q3E790 80 aa2.33□□□□□ -2.04
RPA190YOR341W YLR415CO13578 112 aa2.33□□□□□ -2.04
RPA190YOR341W NHP6BP11633 99 aaKnown RBP2.33□□□□□ -2.04
RPA190YOR341W YDL242WQ07746 117 aa2.33□□□□□ -2.04
RPA190YOR341W KSH1Q8TGJ3 72 aa2.33□□□□□ -2.04
RPA190YOR341W NHP2P32495 156 aaPredicted RBP2.33□□□□□ -2.04
RPA190YOR341W YHR022CP38763 256 aa2.33□□□□□ -2.04
RPA190YOR341W YFR045WP43617 309 aa2.33□□□□□ -2.04
RPA190YOR341W GPI19Q04082 140 aa2.33□□□□□ -2.04
RPA190YOR341W NMA1Q06178 401 aaKnown RBP2.33□□□□□ -2.04
RPA190YOR341W CMC4Q3E7A9 73 aa2.33□□□□□ -2.04
RPA190YOR341W CSH1P38287 376 aa2.33□□□□□ -2.04
RPA190YOR341W SOH1P38633 127 aa2.33□□□□□ -2.04
RPA190YOR341W GAT4P40569 121 aa2.33□□□□□ -2.04
RPA190YOR341W THG1P53215 237 aaKnown RBP2.33□□□□□ -2.04
RPA190YOR341W BET5Q03630 159 aa2.32□□□□□ -2.04
RPA190YOR341W SEC16P48415 2195 aaKnown RBP2.32□□□□□ -2.04
RPA190YOR341W ADH2P00331 348 aaKnown RBP2.32□□□□□ -2.04
RPA190YOR341W NTF2P33331 125 aaKnown RBP2.32□□□□□ -2.04
RPA190YOR341W YHL018WP38744 120 aaPredicted RBP2.32□□□□□ -2.04
RPA190YOR341W GCV3P39726 170 aaPredicted RBP2.32□□□□□ -2.04
RPA190YOR341W MIC26P50087 233 aa2.32□□□□□ -2.04
RPA190YOR341W CTR3Q06686 241 aa2.32□□□□□ -2.04
RPA190YOR341W UBR1P19812 1950 aa2.32□□□□□ -2.04
RPA190YOR341W AQY1P0CD91 305 aa2.32□□□□□ -2.04
RPA190YOR341W SNU13P39990 126 aaKnown RBP2.32□□□□□ -2.04
RPA190YOR341W YGL118CP53132 145 aa2.32□□□□□ -2.04
RPA190YOR341W COX7P10174 60 aa2.32□□□□□ -2.04
RPA190YOR341W RPL16AP26784 199 aaKnown RBP2.32□□□□□ -2.04
RPA190YOR341W POG1P40473 351 aa2.32□□□□□ -2.04
RPA190YOR341W PRM7Q12459 698 aa2.32□□□□□ -2.04
RPA190YOR341W YPL119C-AQ3E751 87 aa2.32□□□□□ -2.04
RPA190YOR341W YMR122W-AQ3E842 84 aa2.32□□□□□ -2.04
RPA190YOR341W CDC39P25655 2108 aaKnown RBP2.31□□□□□ -2.04
RPA190YOR341W YBR209WP38311 105 aa2.31□□□□□ -2.04
RPA190YOR341W GRX5Q02784 150 aa2.31□□□□□ -2.04
RPA190YOR341W FIT2Q08906 153 aa2.31□□□□□ -2.04
RPA190YOR341W YBL059WP34224 193 aa2.31□□□□□ -2.04
RPA190YOR341W AIM29P36154 155 aa2.31□□□□□ -2.04
RPA190YOR341W YPL229WQ99395 206 aa2.31□□□□□ -2.04
RPA190YOR341W AIM19P40502 157 aa2.31□□□□□ -2.04
RPA190YOR341W SDS23P53172 527 aa2.31□□□□□ -2.04
RPA190YOR341W AYT1Q12226 474 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms