RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLP1	YOR250C	GEP7	P53171	287 aa		4.68	□□□□□ -1.66
CLP1	YOR250C	YGR050C	P53231	118 aa		4.68	□□□□□ -1.66
CLP1	YOR250C	YNR064C	P53750	290 aa		4.68	□□□□□ -1.66
CLP1	YOR250C	RDL2	Q08742	149 aa	Known RBP	4.68	□□□□□ -1.66
CLP1	YOR250C	YOR292C	Q08743	309 aa		4.68	□□□□□ -1.66
CLP1	YOR250C	NIP7	Q08962	181 aa	Known RBP	4.68	□□□□□ -1.66
CLP1	YOR250C	CRC1	Q12289	327 aa		4.68	□□□□□ -1.66
CLP1	YOR250C	PRP46	Q12417	451 aa	Predicted RBP	4.68	□□□□□ -1.66
CLP1	YOR250C	YLR363W-A	Q3E747	85 aa		4.68	□□□□□ -1.66
CLP1	YOR250C	YOS1	Q3E834	85 aa		4.68	□□□□□ -1.66
CLP1	YOR250C	YAL064W-B	O13512	126 aa		4.67	□□□□□ -1.66
CLP1	YOR250C	MSI1	P13712	422 aa		4.67	□□□□□ -1.66
CLP1	YOR250C	MRPL20	P22354	195 aa	Predicted RBP	4.67	□□□□□ -1.66
CLP1	YOR250C	VMA11	P32842	164 aa		4.67	□□□□□ -1.66
CLP1	YOR250C	YKR070W	P36151	352 aa	Known RBP	4.67	□□□□□ -1.66
CLP1	YOR250C	OST2	P46964	130 aa		4.67	□□□□□ -1.66
CLP1	YOR250C	CPD1	P53314	239 aa		4.67	□□□□□ -1.66
CLP1	YOR250C	BOL1	Q3E793	110 aa		4.67	□□□□□ -1.66
CLP1	YOR250C	YLR302C	O13544	120 aa		4.66	□□□□□ -1.66
CLP1	YOR250C	HEM4	P06174	275 aa		4.66	□□□□□ -1.66
CLP1	YOR250C	RPL12A	P0CX53	165 aa	Known RBP	4.66	□□□□□ -1.66
CLP1	YOR250C	RPL12B	P0CX54	165 aa		4.66	□□□□□ -1.66
CLP1	YOR250C	HMRA1	P0CY11	126 aa		4.66	□□□□□ -1.66
CLP1	YOR250C	SEC11	P15367	167 aa		4.66	□□□□□ -1.66
CLP1	YOR250C	YPS1	P32329	569 aa		4.66	□□□□□ -1.66
CLP1	YOR250C	QRI5	P32344	111 aa		4.66	□□□□□ -1.66
CLP1	YOR250C	PAM17	P36147	197 aa		4.66	□□□□□ -1.66
CLP1	YOR250C	CYR1	P08678	2026 aa	Known RBP	4.65	□□□□□ -1.66
CLP1	YOR250C	ECM12	O13529	151 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	YIL163C	P40448	117 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	YGL118C	P53132	145 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	WSC2	P53832	503 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	NUP53	Q03790	475 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	LPP1	Q04396	274 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	YMR254C	Q04838	102 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	YMR320W	Q04897	101 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	FIT3	Q08907	204 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	YPS3	Q12303	508 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	YIL102C-A	Q2V2P5	75 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	YNL277W-A	Q3E7Z0	62 aa		4.65	□□□□□ -1.67
CLP1	YOR250C	CDC39	P25655	2108 aa	Known RBP	4.64	□□□□□ -1.67
CLP1	YOR250C	KTI12	P34253	313 aa	Known RBP	4.64	□□□□□ -1.67
CLP1	YOR250C	ARP3	P47117	449 aa	Known RBP	4.64	□□□□□ -1.67
CLP1	YOR250C	YDR209C	Q03480	137 aa		4.64	□□□□□ -1.67
CLP1	YOR250C	RIM9	Q04734	239 aa		4.64	□□□□□ -1.67
CLP1	YOR250C	YOL118C	Q08259	102 aa		4.64	□□□□□ -1.67
CLP1	YOR250C	UTP23	Q12339	254 aa	Known RBP	4.64	□□□□□ -1.67
CLP1	YOR250C	YOR192C-C	Q3E736	78 aa		4.64	□□□□□ -1.67
CLP1	YOR250C	RPS14A	P06367	137 aa	Known RBP	4.63	□□□□□ -1.67
CLP1	YOR250C	MRS1	P07266	363 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	ERG8	P24521	451 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	IES6	P32617	166 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	SRX1	P36077	127 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	RPS14B	P39516	138 aa	Known RBP	4.63	□□□□□ -1.67
CLP1	YOR250C	YJL213W	P40896	331 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	DSK2	P48510	373 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	MIC27	P50945	234 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	CAX4	P53223	239 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	PCP1	P53259	346 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	YGR164W	P53291	111 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	YDR029W	Q12111	104 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	POC4	Q12245	148 aa	Predicted RBP	4.63	□□□□□ -1.67
CLP1	YOR250C	ATO3	Q12359	275 aa		4.63	□□□□□ -1.67
CLP1	YOR250C	KRE1	P17260	313 aa		4.62	□□□□□ -1.67
CLP1	YOR250C	YER079W	P40052	210 aa	Known RBP	4.62	□□□□□ -1.67
CLP1	YOR250C	YNL198C	P40166	100 aa		4.62	□□□□□ -1.67
CLP1	YOR250C	YIL029C	P40538	142 aa		4.62	□□□□□ -1.67
CLP1	YOR250C	LCB3	P47013	409 aa		4.62	□□□□□ -1.67
CLP1	YOR250C	TDA4	P47153	279 aa		4.62	□□□□□ -1.67
CLP1	YOR250C	ATP19	P81451	68 aa		4.62	□□□□□ -1.67
CLP1	YOR250C	DGA1	Q08650	418 aa		4.62	□□□□□ -1.67
CLP1	YOR250C	MPD1	Q12404	318 aa	Known RBP	4.62	□□□□□ -1.67
CLP1	YOR250C	ROX3	P25046	220 aa		4.61	□□□□□ -1.67
CLP1	YOR250C	IMP1	P28627	190 aa		4.61	□□□□□ -1.67
CLP1	YOR250C	CAB4	P53332	305 aa		4.61	□□□□□ -1.67
CLP1	YOR250C	YLR042C	Q07990	161 aa		4.61	□□□□□ -1.67
CLP1	YOR250C	RFM1	Q12192	310 aa		4.61	□□□□□ -1.67
CLP1	YOR250C	YDL180W	Q12301	547 aa		4.61	□□□□□ -1.67
CLP1	YOR250C	SCS22	Q6Q595	175 aa		4.61	□□□□□ -1.67
CLP1	YOR250C	RPL18A	P0CX49	186 aa	Known RBP	4.6	□□□□□ -1.67
CLP1	YOR250C	RPL18B	P0CX50	186 aa	Known RBP	4.6	□□□□□ -1.67
CLP1	YOR250C	YCR085W	P25650	117 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	RPA12	P32529	125 aa	Known RBP	4.6	□□□□□ -1.67
CLP1	YOR250C	YHR173C	P38864	112 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	YIL086C	P40503	102 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	SAS2	P40963	338 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	BRP1	P53194	125 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	YNR071C	P53757	342 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	SWS2	P53937	143 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	BET5	Q03630	159 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	ARC18	Q05933	178 aa	Known RBP	4.6	□□□□□ -1.67
CLP1	YOR250C	RAF1	Q06891	181 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	YOR097C	Q12274	175 aa	Predicted RBP	4.6	□□□□□ -1.67
CLP1	YOR250C	YGL258W-A	Q3E740	77 aa		4.6	□□□□□ -1.67
CLP1	YOR250C	RPS2	P25443	254 aa	Known RBP	4.59	□□□□□ -1.67
CLP1	YOR250C	MRPL49	P40858	161 aa	Predicted RBP	4.59	□□□□□ -1.67
CLP1	YOR250C	BLM10	P43583	2143 aa		4.59	□□□□□ -1.67
CLP1	YOR250C	CIS3	P47001	227 aa		4.59	□□□□□ -1.67
CLP1	YOR250C	SWT21	P53873	357 aa	Predicted RBP	4.59	□□□□□ -1.67
CLP1	YOR250C	VPS71	Q03433	280 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms