RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W MPC2P38857 129 aa11.13□□□□□ -0.63
SHR5YOL110W GTT1P40582 234 aa11.13□□□□□ -0.63
SHR5YOL110W HAM1P47119 197 aaKnown RBP11.13□□□□□ -0.63
SHR5YOL110W YNL146C-AQ3E7Z1 64 aa11.13□□□□□ -0.63
SHR5YOL110W YCL001W-BQ96VH2 84 aa11.13□□□□□ -0.63
SHR5YOL110W MIG1P27705 504 aa11.12□□□□□ -0.63
SHR5YOL110W PRE5P40302 234 aaKnown RBP11.12□□□□□ -0.63
SHR5YOL110W QRI5P32344 111 aa11.11□□□□□ -0.63
SHR5YOL110W ECM33P38248 429 aaKnown RBP11.11□□□□□ -0.63
SHR5YOL110W PAU5P43575 122 aa11.11□□□□□ -0.63
SHR5YOL110W YFR045WP43617 309 aa11.11□□□□□ -0.63
SHR5YOL110W ALG13P53178 202 aa11.11□□□□□ -0.63
SHR5YOL110W AIR2Q12476 344 aaKnown RBP11.1□□□□□ -0.63
SHR5YOL110W YLR342W-AQ3E810 57 aa11.1□□□□□ -0.63
SHR5YOL110W FZF1P32805 299 aa11.09□□□□□ -0.63
SHR5YOL110W GIM5Q04493 163 aa11.09□□□□□ -0.63
SHR5YOL110W UTP23Q12339 254 aaKnown RBP11.09□□□□□ -0.63
SHR5YOL110W DAD2P36162 133 aa11.08□□□□□ -0.64
SHR5YOL110W YNR034W-AQ3E841 98 aa11.08□□□□□ -0.64
SHR5YOL110W CPT1P17898 393 aa11.07□□□□□ -0.64
SHR5YOL110W IRC22P40006 225 aa11.07□□□□□ -0.64
SHR5YOL110W MIC26P50087 233 aa11.07□□□□□ -0.64
SHR5YOL110W HMRA1P0CY11 126 aa11.06□□□□□ -0.64
SHR5YOL110W CUP2P15315 225 aa11.06□□□□□ -0.64
SHR5YOL110W YBR013CP38215 129 aa11.06□□□□□ -0.64
SHR5YOL110W YPR063CQ12160 140 aa11.06□□□□□ -0.64
SHR5YOL110W YHR022CP38763 256 aa11.05□□□□□ -0.64
SHR5YOL110W YER135CP40082 130 aa11.05□□□□□ -0.64
SHR5YOL110W YGR026WP53217 278 aa11.05□□□□□ -0.64
SHR5YOL110W YMR244WQ04018 355 aa11.05□□□□□ -0.64
SHR5YOL110W CCW12Q12127 133 aa11.05□□□□□ -0.64
SHR5YOL110W PAU19P0CE85 124 aa11.04□□□□□ -0.64
SHR5YOL110W PAU21P0CE86 164 aa11.04□□□□□ -0.64
SHR5YOL110W PAU22P0CE87 164 aa11.04□□□□□ -0.64
SHR5YOL110W PAU3P25610 124 aa11.04□□□□□ -0.64
SHR5YOL110W MIX23P38162 196 aa11.04□□□□□ -0.64
SHR5YOL110W SPI1P40092 148 aa11.04□□□□□ -0.64
SHR5YOL110W YDR274CP87283 123 aa11.04□□□□□ -0.64
SHR5YOL110W UPS3Q04006 179 aa11.04□□□□□ -0.64
SHR5YOL110W GRH1Q04410 372 aaKnown RBP11.04□□□□□ -0.64
SHR5YOL110W MRPL31P14063 131 aaPredicted RBP11.03□□□□□ -0.64
SHR5YOL110W YJR096WP47137 282 aa11.03□□□□□ -0.64
SHR5YOL110W PAM17P36147 197 aa11.02□□□□□ -0.65
SHR5YOL110W RPB11P38902 120 aa11.02□□□□□ -0.65
SHR5YOL110W MRPS8Q03799 155 aa11.02□□□□□ -0.65
SHR5YOL110W CSM4Q08955 156 aa11.02□□□□□ -0.65
SHR5YOL110W MIG3P39943 394 aa11.01□□□□□ -0.65
SHR5YOL110W COX16P47081 118 aa11.01□□□□□ -0.65
SHR5YOL110W RPL12AP0CX53 165 aaKnown RBP11□□□□□ -0.65
SHR5YOL110W RPL12BP0CX54 165 aa11□□□□□ -0.65
SHR5YOL110W MDM10P18409 493 aa10.99□□□□□ -0.65
SHR5YOL110W VPS71Q03433 280 aa10.99□□□□□ -0.65
SHR5YOL110W SUR2P38992 349 aa10.98□□□□□ -0.65
SHR5YOL110W TIM22Q12328 207 aa10.98□□□□□ -0.65
SHR5YOL110W YOL085CQ99345 113 aa10.98□□□□□ -0.65
SHR5YOL110W PAU7P39545 55 aa10.97□□□□□ -0.65
SHR5YOL110W GET2P40056 285 aa10.97□□□□□ -0.65
SHR5YOL110W MRPL33P20084 86 aa10.95□□□□□ -0.66
SHR5YOL110W KEG1P43614 200 aa10.95□□□□□ -0.66
SHR5YOL110W MSC3Q05812 728 aa10.95□□□□□ -0.66
SHR5YOL110W ATP16Q12165 160 aa10.95□□□□□ -0.66
SHR5YOL110W YDR215CQ12240 137 aa10.95□□□□□ -0.66
SHR5YOL110W TMA17Q12513 150 aa10.95□□□□□ -0.66
SHR5YOL110W YGR017WP53210 297 aa10.94□□□□□ -0.66
SHR5YOL110W THG1P53215 237 aaKnown RBP10.94□□□□□ -0.66
SHR5YOL110W DIA1P54005 336 aa10.94□□□□□ -0.66
SHR5YOL110W POM33Q12164 279 aa10.94□□□□□ -0.66
SHR5YOL110W YLR122CQ12312 125 aa10.94□□□□□ -0.66
SHR5YOL110W GTO3Q04806 366 aa10.93□□□□□ -0.66
SHR5YOL110W VAR1P02381 398 aa10.92□□□□□ -0.66
SHR5YOL110W VMA16P23968 213 aa10.92□□□□□ -0.66
SHR5YOL110W SDS23P53172 527 aa10.92□□□□□ -0.66
SHR5YOL110W YLR281CQ05863 155 aa10.92□□□□□ -0.66
SHR5YOL110W ATG33Q06485 197 aa10.92□□□□□ -0.66
SHR5YOL110W RPS22BQ3E7Y3 130 aaKnown RBP10.92□□□□□ -0.66
SHR5YOL110W POR1P04840 283 aaKnown RBP10.91□□□□□ -0.66
SHR5YOL110W AGA1P32323 725 aa10.91□□□□□ -0.66
SHR5YOL110W RPL27AP0C2H6 136 aaKnown RBP10.9□□□□□ -0.66
SHR5YOL110W RPL2AP0CX45 254 aaKnown RBP10.9□□□□□ -0.66
SHR5YOL110W RPL2BP0CX46 254 aaKnown RBP10.9□□□□□ -0.66
SHR5YOL110W GPI19Q04082 140 aa10.9□□□□□ -0.66
SHR5YOL110W ARC18Q05933 178 aaKnown RBP10.9□□□□□ -0.66
SHR5YOL110W RPS11AP0CX47 156 aaKnown RBP10.89□□□□□ -0.67
SHR5YOL110W RPS11BP0CX48 156 aaKnown RBP10.89□□□□□ -0.67
SHR5YOL110W YHR140WP38842 239 aa10.89□□□□□ -0.67
SHR5YOL110W ARL3Q02804 198 aa10.89□□□□□ -0.67
SHR5YOL110W ZRT1P32804 376 aa10.88□□□□□ -0.67
SHR5YOL110W YFR035CP43608 114 aa10.88□□□□□ -0.67
SHR5YOL110W COX12Q01519 83 aa10.88□□□□□ -0.67
SHR5YOL110W Q0255P03881 472 aa10.87□□□□□ -0.67
SHR5YOL110W RPL23AP0CX41 137 aaKnown RBP10.87□□□□□ -0.67
SHR5YOL110W RPL23BP0CX42 137 aaKnown RBP10.87□□□□□ -0.67
SHR5YOL110W CYT2Q00873 224 aa10.87□□□□□ -0.67
SHR5YOL110W YCR024C-BQ3E7Z8 88 aa10.87□□□□□ -0.67
SHR5YOL110W TY1A-HP0C2I4 478 aaKnown RBP10.86□□□□□ -0.67
SHR5YOL110W MLF3P32047 452 aa10.86□□□□□ -0.67
SHR5YOL110W YGR149WP48236 432 aa10.86□□□□□ -0.67
SHR5YOL110W YDR366CP87287 132 aa10.86□□□□□ -0.67
SHR5YOL110W WIP1Q2V2P8 89 aa10.86□□□□□ -0.67
SHR5YOL110W FRS1P15624 595 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms