RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W DDP1Q99321 188 aaKnown RBP2.29□□□□□ -2.04
MSH2YOL090W YCR050CP25630 102 aa2.28□□□□□ -2.04
MSH2YOL090W SRL3P36167 246 aa2.28□□□□□ -2.04
MSH2YOL090W YAR029WP39549 74 aa2.28□□□□□ -2.04
MSH2YOL090W CSI2Q08054 341 aa2.28□□□□□ -2.04
MSH2YOL090W YKL068W-AQ3E826 78 aa2.28□□□□□ -2.04
MSH2YOL090W MSB2P32334 1306 aa2.28□□□□□ -2.04
MSH2YOL090W ANB1P19211 157 aa2.28□□□□□ -2.04
MSH2YOL090W PAM17P36147 197 aa2.28□□□□□ -2.04
MSH2YOL090W PIR5P46999 287 aa2.28□□□□□ -2.04
MSH2YOL090W EMC4P53073 190 aa2.28□□□□□ -2.04
MSH2YOL090W YGL230CP53074 147 aa2.28□□□□□ -2.04
MSH2YOL090W YNR077CP53758 84 aa2.28□□□□□ -2.04
MSH2YOL090W YOR381W-AQ3E804 55 aa2.28□□□□□ -2.04
MSH2YOL090W UBR1P19812 1950 aa2.28□□□□□ -2.04
MSH2YOL090W RAD6P06104 172 aa2.28□□□□□ -2.05
MSH2YOL090W YPT31P38555 223 aaKnown RBP2.28□□□□□ -2.05
MSH2YOL090W YAE1P47118 141 aaPredicted RBP2.28□□□□□ -2.05
MSH2YOL090W DOC1P53068 250 aa2.28□□□□□ -2.05
MSH2YOL090W YNR064CP53750 290 aa2.28□□□□□ -2.05
MSH2YOL090W MRPS8Q03799 155 aa2.28□□□□□ -2.05
MSH2YOL090W RIM9Q04734 239 aa2.28□□□□□ -2.05
MSH2YOL090W YAL064WP39711 94 aa2.27□□□□□ -2.05
MSH2YOL090W CUP9P41817 306 aa2.27□□□□□ -2.05
MSH2YOL090W SAS5Q99314 248 aa2.27□□□□□ -2.05
MSH2YOL090W FZF1P32805 299 aa2.27□□□□□ -2.05
MSH2YOL090W YHR180WP38868 163 aa2.27□□□□□ -2.05
MSH2YOL090W YEL073CP39974 107 aa2.27□□□□□ -2.05
MSH2YOL090W MDH2P22133 377 aa2.26□□□□□ -2.05
MSH2YOL090W SDH4P37298 181 aa2.26□□□□□ -2.05
MSH2YOL090W TVP23P38962 199 aa2.26□□□□□ -2.05
MSH2YOL090W SFT2P38166 215 aa2.26□□□□□ -2.05
MSH2YOL090W YHL042WP38729 150 aa2.26□□□□□ -2.05
MSH2YOL090W YNL217WP40152 326 aa2.26□□□□□ -2.05
MSH2YOL090W SHH3Q04487 196 aa2.26□□□□□ -2.05
MSH2YOL090W YJL027CP47063 138 aaPredicted RBP2.25□□□□□ -2.05
MSH2YOL090W YGR026WP53217 278 aa2.25□□□□□ -2.05
MSH2YOL090W YMR295CQ03559 197 aa2.25□□□□□ -2.05
MSH2YOL090W LIP1Q03579 150 aa2.25□□□□□ -2.05
MSH2YOL090W UPS1Q05776 175 aa2.25□□□□□ -2.05
MSH2YOL090W KTI11Q3E840 82 aa2.25□□□□□ -2.05
MSH2YOL090W MSW1P04803 379 aa2.25□□□□□ -2.05
MSH2YOL090W YPI1P43587 155 aa2.25□□□□□ -2.05
MSH2YOL090W DML1Q03652 475 aa2.25□□□□□ -2.05
MSH2YOL090W YDL241WQ07738 123 aa2.25□□□□□ -2.05
MSH2YOL090W MIG1P27705 504 aa2.24□□□□□ -2.05
MSH2YOL090W YER084WP40057 128 aa2.24□□□□□ -2.05
MSH2YOL090W RIO2P40160 425 aaKnown RBP2.24□□□□□ -2.05
MSH2YOL090W IRC23Q08416 157 aa2.24□□□□□ -2.05
MSH2YOL090W YOR015WQ12169 119 aa2.24□□□□□ -2.05
MSH2YOL090W SCS22Q6Q595 175 aa2.24□□□□□ -2.05
MSH2YOL090W YET1P35723 206 aa2.24□□□□□ -2.05
MSH2YOL090W PAM16P42949 149 aa2.24□□□□□ -2.05
MSH2YOL090W SAY1P53324 424 aa2.24□□□□□ -2.05
MSH2YOL090W ATG10Q07879 167 aa2.24□□□□□ -2.05
MSH2YOL090W YOR097CQ12274 175 aaPredicted RBP2.24□□□□□ -2.05
MSH2YOL090W RPS19AP07280 144 aaKnown RBP2.24□□□□□ -2.05
MSH2YOL090W RPS19BP07281 144 aaPredicted RBP2.24□□□□□ -2.05
MSH2YOL090W YKR032WP36127 104 aa2.24□□□□□ -2.05
MSH2YOL090W PHO88P38264 188 aaPredicted RBP2.24□□□□□ -2.05
MSH2YOL090W YBR242WP38331 238 aa2.24□□□□□ -2.05
MSH2YOL090W SCP1Q08873 200 aa2.24□□□□□ -2.05
MSH2YOL090W YOR385WQ08909 290 aa2.24□□□□□ -2.05
MSH2YOL090W FEX1Q08913 375 aa2.24□□□□□ -2.05
MSH2YOL090W FEX2Q08991 375 aa2.24□□□□□ -2.05
MSH2YOL090W TAO3P40468 2376 aa2.23□□□□□ -2.05
MSH2YOL090W FAS1P07149 2051 aaKnown RBP2.23□□□□□ -2.05
MSH2YOL090W UBC5P15732 148 aa2.23□□□□□ -2.05
MSH2YOL090W SEC59P20048 519 aa2.23□□□□□ -2.05
MSH2YOL090W MRPL15P36523 253 aa2.23□□□□□ -2.05
MSH2YOL090W AIM18P38884 321 aa2.23□□□□□ -2.05
MSH2YOL090W GAA1P39012 614 aa2.23□□□□□ -2.05
MSH2YOL090W NSE4P43124 402 aa2.23□□□□□ -2.05
MSH2YOL090W RCE1Q03530 315 aa2.23□□□□□ -2.05
MSH2YOL090W RRT7Q07829 113 aa2.23□□□□□ -2.05
MSH2YOL090W INO4P13902 151 aa2.23□□□□□ -2.05
MSH2YOL090W YBR090CP38253 122 aa2.23□□□□□ -2.05
MSH2YOL090W YMR321CQ04898 105 aa2.23□□□□□ -2.05
MSH2YOL090W BOL2P53082 120 aa2.22□□□□□ -2.05
MSH2YOL090W ERV15P38312 142 aa2.22□□□□□ -2.05
MSH2YOL090W TMC1Q08422 150 aaPredicted RBP2.22□□□□□ -2.05
MSH2YOL090W YGL194C-AQ2V2P6 80 aa2.22□□□□□ -2.05
MSH2YOL090W YGL260WP53056 76 aa2.21□□□□□ -2.06
MSH2YOL090W MZM1Q03429 123 aaPredicted RBP2.21□□□□□ -2.06
MSH2YOL090W YCR075W-AQ3E830 75 aa2.21□□□□□ -2.06
MSH2YOL090W RAS2P01120 322 aaKnown RBP2.21□□□□□ -2.06
MSH2YOL090W MAK31P23059 88 aa2.21□□□□□ -2.06
MSH2YOL090W YCL001W-AP87012 153 aa2.21□□□□□ -2.06
MSH2YOL090W YMR103CQ04436 120 aa2.21□□□□□ -2.06
MSH2YOL090W HSP26P15992 214 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06 RIP-Chip
MSH2YOL090W YEA6P39953 335 aa2.2□□□□□ -2.06
MSH2YOL090W GNA1P43577 159 aaPredicted RBP2.2□□□□□ -2.06
MSH2YOL090W RPL13AQ12690 199 aaPredicted RBP2.2□□□□□ -2.06
MSH2YOL090W TOM1Q03280 3268 aa2.2□□□□□ -2.06
MSH2YOL090W COX5BP00425 151 aa2.2□□□□□ -2.06
MSH2YOL090W RPS23AP0CX29 145 aaKnown RBP2.2□□□□□ -2.06
MSH2YOL090W RPS23BP0CX30 145 aa2.2□□□□□ -2.06
MSH2YOL090W HYP2P23301 157 aaKnown RBP2.2□□□□□ -2.06
MSH2YOL090W FLX1P40464 311 aa2.2□□□□□ -2.06
MSH2YOL090W YIR035CP40579 254 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms