RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	BPH1	P25356	2167 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	CCH1	P50077	2039 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	URA5	P13298	226 aa	Known RBP	2.24	□□□□□ -2.05
PEX6	YNL329C	TIM12	P32830	109 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	YEA6	P39953	335 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	YFR054C	P43622	192 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	YDR102C	Q03864	110 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	AVO2	Q04749	426 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	GEP5	Q12393	293 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	YLR422W	Q06409	1932 aa		2.24	□□□□□ -2.05
PEX6	YNL329C	PAM17	P36147	197 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	CSH1	P38287	376 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	IRC22	P40006	225 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	SPC25	P40014	221 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	UPS3	Q04006	179 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	SHH3	Q04487	196 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	MSB2	P32334	1306 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	NHP6A	P11632	93 aa	Known RBP	2.23	□□□□□ -2.05
PEX6	YNL329C	FCY2	P17064	533 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	AGA2	P32781	87 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	SUI1	P32911	108 aa	Known RBP	2.23	□□□□□ -2.05
PEX6	YNL329C	APJ1	P53940	528 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	COX19	Q3E731	98 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	HTL1	Q9URQ5	78 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	POR1	P04840	283 aa	Known RBP	2.23	□□□□□ -2.05
PEX6	YNL329C	DOG2	P38773	246 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	YHR180W	P38868	163 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	THG1	P53215	237 aa	Known RBP	2.23	□□□□□ -2.05
PEX6	YNL329C	ATG39	Q06159	398 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	YOR385W	Q08909	290 aa		2.23	□□□□□ -2.05
PEX6	YNL329C	RPL25	P04456	142 aa	Known RBP	2.22	□□□□□ -2.05
PEX6	YNL329C	RPS23A	P0CX29	145 aa	Known RBP	2.22	□□□□□ -2.05
PEX6	YNL329C	RPS23B	P0CX30	145 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	RPF1	P38805	295 aa	Known RBP	2.22	□□□□□ -2.05
PEX6	YNL329C	YFR045W	P43617	309 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	UBC7	Q02159	165 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	AIM34	Q03673	198 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	FAB1	P34756	2278 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	FAS1	P07149	2051 aa	Known RBP	2.22	□□□□□ -2.05
PEX6	YNL329C	PAU1	P0CE88	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	PAU14	P0CE89	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	PAU6	P0CE90	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	PAU18	P0CE91	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	PAU8	P0CE92	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	PAU11	P0CE93	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	FMT1	P32785	401 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	PAU13	P38725	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	YIL163C	P40448	117 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	ARP3	P47117	449 aa	Known RBP	2.22	□□□□□ -2.05
PEX6	YNL329C	PAU10	Q03050	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	YPR195C	Q06594	109 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	PAU20	Q08322	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	YDR524C-B	Q3E6R4	66 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	PAU9	Q3E770	120 aa		2.22	□□□□□ -2.05
PEX6	YNL329C	BRR2	P32639	2163 aa	Known RBP	2.21	□□□□□ -2.05
PEX6	YNL329C	COX5B	P00425	151 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	RPS28B	P0C0X0	67 aa	Known RBP	2.21	□□□□□ -2.05
PEX6	YNL329C	STP22	P25604	385 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	SUA7	P29055	345 aa	Predicted RBP	2.21	□□□□□ -2.05
PEX6	YNL329C	YAR068W	P39564	161 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	YEA4	P40004	342 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	YER134C	P40081	178 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	YER188W	P40103	239 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	CUP9	P41817	306 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	PAU5	P43575	122 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	ERJ5	P43613	295 aa	Predicted RBP	2.21	□□□□□ -2.05
PEX6	YNL329C	GON7	P46984	123 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	RSM10	Q03201	203 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	YDL180W	Q12301	547 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	SMT3	Q12306	101 aa	Known RBP	2.21	□□□□□ -2.05
PEX6	YNL329C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.21	□□□□□ -2.05
PEX6	YNL329C	COA2	Q3E823	68 aa		2.21	□□□□□ -2.05
PEX6	YNL329C	FMP49	A0A023PZB3	126 aa		2.21	□□□□□ -2.06
PEX6	YNL329C	YBR090C	P38253	122 aa		2.21	□□□□□ -2.06
PEX6	YNL329C	PAU15	P40585	124 aa		2.21	□□□□□ -2.06
PEX6	YNL329C	CAB4	P53332	305 aa		2.21	□□□□□ -2.06
PEX6	YNL329C	DIG2	Q03373	323 aa	Known RBP	2.21	□□□□□ -2.06
PEX6	YNL329C	SDH7	Q04401	133 aa		2.21	□□□□□ -2.06
PEX6	YNL329C	YLR030W	Q07967	263 aa		2.21	□□□□□ -2.06
PEX6	YNL329C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.21	□□□□□ -2.06
PEX6	YNL329C	YPR170W-B	P0C5R9	85 aa		2.21	□□□□□ -2.06
PEX6	YNL329C	YPT31	P38555	223 aa	Known RBP	2.21	□□□□□ -2.06
PEX6	YNL329C	PAU4	P53427	120 aa		2.21	□□□□□ -2.06
PEX6	YNL329C	YKL102C	P34249	101 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	SKI6	P46948	246 aa	Predicted RBP	2.2	□□□□□ -2.06
PEX6	YNL329C	XPT1	P47165	209 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	ERG25	P53045	309 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	THI74	Q04083	370 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	SYM1	Q06563	197 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	YLR042C	Q07990	161 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	YLR118C	Q12354	227 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	COA6	Q3E846	104 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	YHR214C-E	Q8TGK0	99 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	PAU19	P0CE85	124 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	PAU21	P0CE86	164 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	PAU22	P0CE87	164 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	RPL2A	P0CX45	254 aa	Known RBP	2.2	□□□□□ -2.06
PEX6	YNL329C	RPL2B	P0CX46	254 aa	Known RBP	2.2	□□□□□ -2.06
PEX6	YNL329C	PAU3	P25610	124 aa		2.2	□□□□□ -2.06
PEX6	YNL329C	APS2	Q00381	147 aa		2.2	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 127.9 ms