RNA–Protein interactions for RNA: YNL326C

PFA3, Transcript of Palmitoyltransferase for Vac8p, yeast

Gene PFA3, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFA3	YNL326C	SWT21	P53873	357 aa	Predicted RBP	4.64	□□□□□ -1.67
PFA3	YNL326C	NUP53	Q03790	475 aa		4.64	□□□□□ -1.67
PFA3	YNL326C	YDL218W	Q07629	317 aa		4.64	□□□□□ -1.67
PFA3	YNL326C	YPL257W	Q08974	193 aa		4.64	□□□□□ -1.67
PFA3	YNL326C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
PFA3	YNL326C	WIP1	Q2V2P8	89 aa		4.64	□□□□□ -1.67
PFA3	YNL326C	YDR034W-B	Q6Q5X2	51 aa		4.64	□□□□□ -1.67
PFA3	YNL326C	RPL27B	P0C2H7	136 aa	Known RBP	4.63	□□□□□ -1.67
PFA3	YNL326C	YCR022C	P25620	114 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	ARO2	P28777	376 aa	Known RBP	4.63	□□□□□ -1.67
PFA3	YNL326C	FZF1	P32805	299 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	SOR1	P35497	357 aa	Known RBP	4.63	□□□□□ -1.67
PFA3	YNL326C	UTH1	P36135	365 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	YGR018C	P53211	109 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	HST4	P53688	370 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	NRM1	P53718	249 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	ATG4	P53867	494 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	SOR2	Q07786	357 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	TIM18	Q08749	192 aa		4.63	□□□□□ -1.67
PFA3	YNL326C	HEM4	P06174	275 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	CMC1	P36064	111 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	ECM33	P38248	429 aa	Known RBP	4.62	□□□□□ -1.67
PFA3	YNL326C	YPI1	P43587	155 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	BNA2	P47125	453 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	CAB4	P53332	305 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	TOM7	P53507	60 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	YDR042C	Q03205	200 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	UTP23	Q12339	254 aa	Known RBP	4.62	□□□□□ -1.67
PFA3	YNL326C	YIL102C-A	Q2V2P5	75 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	SCS22	Q6Q595	175 aa		4.62	□□□□□ -1.67
PFA3	YNL326C	MRPL20	P22354	195 aa	Predicted RBP	4.61	□□□□□ -1.67
PFA3	YNL326C	YCR023C	P25351	611 aa		4.61	□□□□□ -1.67
PFA3	YNL326C	APS1	P35181	156 aa		4.61	□□□□□ -1.67
PFA3	YNL326C	YGP1	P38616	354 aa	Known RBP	4.61	□□□□□ -1.67
PFA3	YNL326C	API2	Q04413	109 aa		4.61	□□□□□ -1.67
PFA3	YNL326C	ADH6	Q04894	360 aa	Known RBP	4.61	□□□□□ -1.67
PFA3	YNL326C	YKL023C-A	Q2V2P3	75 aa		4.61	□□□□□ -1.67
PFA3	YNL326C	RPL27A	P0C2H6	136 aa	Known RBP	4.6	□□□□□ -1.67
PFA3	YNL326C	HYP2	P23301	157 aa	Known RBP	4.6	□□□□□ -1.67
PFA3	YNL326C	LSM2	P38203	95 aa	Known RBP	4.6	□□□□□ -1.67
PFA3	YNL326C	LST8	P41318	303 aa		4.6	□□□□□ -1.67
PFA3	YNL326C	YLR296W	Q05898	108 aa		4.6	□□□□□ -1.67
PFA3	YNL326C	ATG39	Q06159	398 aa		4.6	□□□□□ -1.67
PFA3	YNL326C	AYT1	Q12226	474 aa		4.6	□□□□□ -1.67
PFA3	YNL326C	DAD1	Q12248	94 aa		4.6	□□□□□ -1.67
PFA3	YNL326C	CPT1	P17898	393 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	DAL80	P26343	269 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	YBR220C	P38318	560 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	YNL198C	P40166	100 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	PIR5	P46999	287 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	YIP1	P53039	248 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	DAD4	P69851	72 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	GTO3	Q04806	366 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	IRC25	Q07951	179 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	SLO1	Q3E784	85 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	YMR105W-A	Q8TGS8	64 aa		4.59	□□□□□ -1.67
PFA3	YNL326C	RPS23A	P0CX29	145 aa	Known RBP	4.58	□□□□□ -1.68
PFA3	YNL326C	RPS23B	P0CX30	145 aa		4.58	□□□□□ -1.68
PFA3	YNL326C	TIR2	P33890	251 aa		4.58	□□□□□ -1.68
PFA3	YNL326C	SUR7	P54003	302 aa		4.58	□□□□□ -1.68
PFA3	YNL326C	YIL014C-A	Q02598	104 aa		4.58	□□□□□ -1.68
PFA3	YNL326C	YLR342W-A	Q3E810	57 aa		4.58	□□□□□ -1.68
PFA3	YNL326C	YHR213W	P0CI67	198 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	PCL2	P25693	308 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	HUA1	P40325	198 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	YFL015C	P43578	164 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	NCA3	P46955	337 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	YJR096W	P47137	282 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	CRZ1	P53968	678 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	MIX17	Q03667	156 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	YDR114C	Q04597	100 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	GAT3	Q07928	141 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	RDL1	Q12305	139 aa	Known RBP	4.57	□□□□□ -1.68
PFA3	YNL326C	RNH203	Q12338	110 aa		4.57	□□□□□ -1.68
PFA3	YNL326C	SEN1	Q00416	2231 aa	Known RBP	4.56	□□□□□ -1.68
PFA3	YNL326C	RRT1	P38192	103 aa		4.56	□□□□□ -1.68
PFA3	YNL326C	ECM14	P38836	430 aa		4.56	□□□□□ -1.68
PFA3	YNL326C	YPL073C	P40323	161 aa		4.56	□□□□□ -1.68
PFA3	YNL326C	IMP2	P46972	177 aa		4.56	□□□□□ -1.68
PFA3	YNL326C	MST27	P53176	234 aa		4.56	□□□□□ -1.68
PFA3	YNL326C	MGR2	Q02889	113 aa		4.56	□□□□□ -1.68
PFA3	YNL326C	GPI19	Q04082	140 aa		4.56	□□□□□ -1.68
PFA3	YNL326C	YKR045C	P36138	183 aa		4.55	□□□□□ -1.68
PFA3	YNL326C	YHR140W	P38842	239 aa		4.55	□□□□□ -1.68
PFA3	YNL326C	MBB1	P39534	108 aa		4.55	□□□□□ -1.68
PFA3	YNL326C	YNL046W	P53956	172 aa		4.55	□□□□□ -1.68
PFA3	YNL326C	ELC1	Q03071	99 aa		4.55	□□□□□ -1.68
PFA3	YNL326C	YMR103C	Q04436	120 aa		4.55	□□□□□ -1.68
PFA3	YNL326C	SCW10	Q04951	389 aa		4.55	□□□□□ -1.68
PFA3	YNL326C	FOL3	Q12676	427 aa	Predicted RBP	4.55	□□□□□ -1.68
PFA3	YNL326C	HFA1	P32874	2273 aa		4.55	□□□□□ -1.68
PFA3	YNL326C	PFY1	P07274	126 aa		4.54	□□□□□ -1.68
PFA3	YNL326C	LDB16	P25587	256 aa		4.54	□□□□□ -1.68
PFA3	YNL326C	ADH5	P38113	351 aa	Known RBP	4.54	□□□□□ -1.68
PFA3	YNL326C	GPI18	P38211	433 aa		4.54	□□□□□ -1.68
PFA3	YNL326C	YHL037C	P38733	133 aa		4.54	□□□□□ -1.68
PFA3	YNL326C	YJL213W	P40896	331 aa		4.54	□□□□□ -1.68
PFA3	YNL326C	FCF1	Q05498	189 aa	Predicted RBP	4.54	□□□□□ -1.68
PFA3	YNL326C	DGA1	Q08650	418 aa		4.54	□□□□□ -1.68
PFA3	YNL326C	ADH1	P00330	348 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms