RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W ANB1P19211 157 aa0.87□□□□□ -2.27
CTK3YML112W RPC19P28000 142 aaKnown RBP0.87□□□□□ -2.27
CTK3YML112W UMP1P38293 148 aa0.87□□□□□ -2.27
CTK3YML112W YBR209WP38311 105 aa0.87□□□□□ -2.27
CTK3YML112W YHL042WP38729 150 aa0.87□□□□□ -2.27
CTK3YML112W TVP23P38962 199 aa0.87□□□□□ -2.27
CTK3YML112W YEL067CP39978 195 aa0.87□□□□□ -2.27
CTK3YML112W GVP36P40531 326 aaKnown RBP0.87□□□□□ -2.27
CTK3YML112W LSM8P47093 109 aaKnown RBP0.87□□□□□ -2.27
CTK3YML112W YNR064CP53750 290 aa0.87□□□□□ -2.27
CTK3YML112W KEI1Q06346 221 aa0.87□□□□□ -2.27
CTK3YML112W IRC23Q08416 157 aa0.87□□□□□ -2.27
CTK3YML112W UIP4Q08926 304 aa0.87□□□□□ -2.27
CTK3YML112W FCF2Q12035 217 aaPredicted RBP0.87□□□□□ -2.27
CTK3YML112W MIC10Q96VH5 97 aa0.87□□□□□ -2.27
CTK3YML112W MED11Q99278 115 aa0.87□□□□□ -2.27
CTK3YML112W TY1B-BRQ12193 1756 aa0.87□□□□□ -2.27
CTK3YML112W GEA1P47102 1408 aaPredicted RBP0.87□□□□□ -2.27
CTK3YML112W TY1B-DR1Q03855 1755 aa0.86□□□□□ -2.27
CTK3YML112W TY1B-DR3Q99231 1755 aa0.86□□□□□ -2.27
CTK3YML112W MAK31P23059 88 aa0.86□□□□□ -2.27
CTK3YML112W YCR099CP25657 155 aa0.86□□□□□ -2.27
CTK3YML112W YHR130CP38834 111 aa0.86□□□□□ -2.27
CTK3YML112W DOC1P53068 250 aa0.86□□□□□ -2.27
CTK3YML112W LIP1Q03579 150 aa0.86□□□□□ -2.27
CTK3YML112W YHP1Q04116 353 aa0.86□□□□□ -2.27
CTK3YML112W YPR174CQ06616 221 aaPredicted RBP0.86□□□□□ -2.27
CTK3YML112W SWC7Q06707 132 aa0.86□□□□□ -2.27
CTK3YML112W RRT15Q3E811 62 aa0.86□□□□□ -2.27
CTK3YML112W UBR1P19812 1950 aa0.86□□□□□ -2.27
CTK3YML112W YRF1-3P0CX14 1859 aa0.86□□□□□ -2.27
CTK3YML112W YRF1-7P0CX15 1859 aa0.86□□□□□ -2.27
CTK3YML112W YRF1-6P53819 1859 aa0.86□□□□□ -2.27
CTK3YML112W GEA2P39993 1459 aaKnown RBP0.86□□□□□ -2.27
CTK3YML112W YPK9Q12697 1472 aa0.86□□□□□ -2.27
CTK3YML112W YRF1-2P40105 1681 aa0.85□□□□□ -2.27
CTK3YML112W MDM35O60200 86 aa0.85□□□□□ -2.27
CTK3YML112W RPL40AP0CH08 128 aaKnown RBP0.85□□□□□ -2.27
CTK3YML112W RPL40BP0CH09 128 aaKnown RBP0.85□□□□□ -2.27
CTK3YML112W HMRA1P0CY11 126 aa0.85□□□□□ -2.27
CTK3YML112W FYV5P25585 152 aa0.85□□□□□ -2.27
CTK3YML112W QCR10P37299 77 aa0.85□□□□□ -2.27
CTK3YML112W YEL073CP39974 107 aa0.85□□□□□ -2.27
CTK3YML112W FLX1P40464 311 aa0.85□□□□□ -2.27
CTK3YML112W RPL37AP49166 88 aaKnown RBP0.85□□□□□ -2.27
CTK3YML112W YMR295CQ03559 197 aa0.85□□□□□ -2.27
CTK3YML112W FIT1Q04433 528 aa0.85□□□□□ -2.27
CTK3YML112W SHH3Q04487 196 aa0.85□□□□□ -2.27
CTK3YML112W SEN15Q04675 128 aa0.85□□□□□ -2.27
CTK3YML112W SOM1Q05676 74 aa0.85□□□□□ -2.27
CTK3YML112W GPI11Q06636 219 aa0.85□□□□□ -2.27
CTK3YML112W RRT7Q07829 113 aa0.85□□□□□ -2.27
CTK3YML112W FIT3Q08907 204 aa0.85□□□□□ -2.27
CTK3YML112W YNL146C-AQ3E7Z1 64 aa0.85□□□□□ -2.27
CTK3YML112W YOR381W-AQ3E804 55 aa0.85□□□□□ -2.27
CTK3YML112W ODC2Q99297 307 aa0.85□□□□□ -2.27
CTK3YML112W TY1B-NL2Q99337 1749 aaKnown RBP0.84□□□□□ -2.27
CTK3YML112W YLR422WQ06409 1932 aa0.84□□□□□ -2.27
CTK3YML112W YKL044WP36092 106 aa0.84□□□□□ -2.27
CTK3YML112W YBR013CP38215 129 aa0.84□□□□□ -2.27
CTK3YML112W IPT1P38954 527 aa0.84□□□□□ -2.27
CTK3YML112W YIR020CP40575 100 aa0.84□□□□□ -2.27
CTK3YML112W GTT1P40582 234 aa0.84□□□□□ -2.27
CTK3YML112W SPG1P50088 95 aa0.84□□□□□ -2.27
CTK3YML112W YCL001W-AP87012 153 aa0.84□□□□□ -2.27
CTK3YML112W UPS3Q04006 179 aa0.84□□□□□ -2.27
CTK3YML112W AVO2Q04749 426 aa0.84□□□□□ -2.27
CTK3YML112W IRC19Q07843 230 aa0.84□□□□□ -2.27
CTK3YML112W YOR015WQ12169 119 aa0.84□□□□□ -2.27
CTK3YML112W POC4Q12245 148 aaPredicted RBP0.84□□□□□ -2.27
CTK3YML112W YMR175W-AQ3E766 64 aa0.84□□□□□ -2.27
CTK3YML112W CMC4Q3E7A9 73 aa0.84□□□□□ -2.27
CTK3YML112W YLR365WQ7LIF2 110 aa0.84□□□□□ -2.27
CTK3YML112W TY1B-DR4Q07793 1604 aa0.84□□□□□ -2.28
CTK3YML112W CAT8P39113 1433 aa0.83□□□□□ -2.28
CTK3YML112W RTC6O14464 93 aa0.83□□□□□ -2.28
CTK3YML112W YHR213WP0CI67 198 aa0.83□□□□□ -2.28
CTK3YML112W INO4P13902 151 aa0.83□□□□□ -2.28
CTK3YML112W HSP150P32478 413 aa0.83□□□□□ -2.28
CTK3YML112W PAU2P32612 120 aa0.83□□□□□ -2.28
CTK3YML112W SNF11P38956 169 aa0.83□□□□□ -2.28
CTK3YML112W YER187WP40102 141 aa0.83□□□□□ -2.28
CTK3YML112W BRP1P53194 125 aa0.83□□□□□ -2.28
CTK3YML112W PAU12P53343 120 aa0.83□□□□□ -2.28
CTK3YML112W YPL067CQ02754 198 aa0.83□□□□□ -2.28
CTK3YML112W PIR1Q03178 341 aa0.83□□□□□ -2.28
CTK3YML112W YMR090WQ04304 227 aaKnown RBP0.83□□□□□ -2.28
CTK3YML112W COA4Q05809 96 aa0.83□□□□□ -2.28
CTK3YML112W ATG10Q07879 167 aa0.83□□□□□ -2.28
CTK3YML112W FIT2Q08906 153 aa0.83□□□□□ -2.28
CTK3YML112W ATG41Q12048 136 aa0.83□□□□□ -2.28
CTK3YML112W YDR029WQ12111 104 aa0.83□□□□□ -2.28
CTK3YML112W YPR013CQ12145 317 aa0.83□□□□□ -2.28
CTK3YML112W YOS1Q3E834 85 aa0.83□□□□□ -2.28
CTK3YML112W SCS22Q6Q595 175 aa0.83□□□□□ -2.28
CTK3YML112W YLR236CA0A023PZG4 107 aa0.82□□□□□ -2.28
CTK3YML112W SRB6P32570 121 aa0.82□□□□□ -2.28
CTK3YML112W PAU24P38155 120 aa0.82□□□□□ -2.28
CTK3YML112W YHL018WP38744 120 aaPredicted RBP0.82□□□□□ -2.28
CTK3YML112W DCV1P43595 202 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms