RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC1YML031W YPS3Q12303 508 aa4.03□□□□□ -1.76
NDC1YML031W TEM1P38987 245 aa4.02□□□□□ -1.77
NDC1YML031W MIC27P50945 234 aa4.02□□□□□ -1.77
NDC1YML031W YDR366CP87287 132 aa4.02□□□□□ -1.77
NDC1YML031W TRI1Q05024 226 aa4.02□□□□□ -1.77
NDC1YML031W RPS22BQ3E7Y3 130 aaKnown RBP4.02□□□□□ -1.77
NDC1YML031W YMR316C-AI2HB70 103 aa4.02□□□□□ -1.77
NDC1YML031W MRS3P10566 314 aa4.02□□□□□ -1.77
NDC1YML031W RPS2P25443 254 aaKnown RBP4.02□□□□□ -1.77
NDC1YML031W GSP1P32835 219 aaKnown RBP4.02□□□□□ -1.77
NDC1YML031W GSP2P32836 220 aaKnown RBP4.02□□□□□ -1.77
NDC1YML031W YHR138CP38841 114 aaPredicted RBP4.02□□□□□ -1.77
NDC1YML031W SCW10Q04951 389 aa4.02□□□□□ -1.77
NDC1YML031W CNL1Q06333 122 aa4.02□□□□□ -1.77
NDC1YML031W PBP4Q07362 185 aaKnown RBP4.02□□□□□ -1.77
NDC1YML031W CSM4Q08955 156 aa4.02□□□□□ -1.77
NDC1YML031W VPS63O13549 108 aa4.01□□□□□ -1.77
NDC1YML031W HTB1P02293 131 aaKnown RBP4.01□□□□□ -1.77
NDC1YML031W HTB2P02294 131 aa4.01□□□□□ -1.77
NDC1YML031W SEC4P07560 215 aaKnown RBP4.01□□□□□ -1.77
NDC1YML031W QRI5P32344 111 aa4.01□□□□□ -1.77
NDC1YML031W MRPL38P35996 138 aaPredicted RBP4.01□□□□□ -1.77
NDC1YML031W RUB1Q03919 77 aa4.01□□□□□ -1.77
NDC1YML031W YPR170W-BP0C5R9 85 aa4□□□□□ -1.77
NDC1YML031W HMRA1P0CY11 126 aa4□□□□□ -1.77
NDC1YML031W MPC2P38857 129 aa4□□□□□ -1.77
NDC1YML031W YNL194CP40169 301 aa4□□□□□ -1.77
NDC1YML031W THG1P53215 237 aaKnown RBP4□□□□□ -1.77
NDC1YML031W YDR274CP87283 123 aa4□□□□□ -1.77
NDC1YML031W YPL162CQ12042 273 aa4□□□□□ -1.77
NDC1YML031W RKI1Q12189 258 aa4□□□□□ -1.77
NDC1YML031W YGL258W-AQ3E740 77 aa4□□□□□ -1.77
NDC1YML031W YLR302CO13544 120 aa4□□□□□ -1.77
NDC1YML031W ADH2P00331 348 aaKnown RBP4□□□□□ -1.77
NDC1YML031W ZRT1P32804 376 aa4□□□□□ -1.77
NDC1YML031W YGL230CP53074 147 aa4□□□□□ -1.77
NDC1YML031W YMR181CQ03231 154 aa4□□□□□ -1.77
NDC1YML031W UPS3Q04006 179 aa4□□□□□ -1.77
NDC1YML031W SEC11P15367 167 aa3.99□□□□□ -1.77
NDC1YML031W NNK1P36003 928 aa3.99□□□□□ -1.77
NDC1YML031W HAC1P41546 238 aa3.99□□□□□ -1.77
NDC1YML031W TDA4P47153 279 aa3.99□□□□□ -1.77
NDC1YML031W YGR219WP53307 113 aa3.99□□□□□ -1.77
NDC1YML031W POS5Q06892 414 aa3.99□□□□□ -1.77
NDC1YML031W PRE1P22141 198 aaKnown RBP3.98□□□□□ -1.77
NDC1YML031W YCR007CP25354 239 aa3.98□□□□□ -1.77
NDC1YML031W YPS1P32329 569 aa3.98□□□□□ -1.77
NDC1YML031W ECM33P38248 429 aaKnown RBP3.98□□□□□ -1.77
NDC1YML031W SAS2P40963 338 aa3.98□□□□□ -1.77
NDC1YML031W MIC26P50087 233 aa3.98□□□□□ -1.77
NDC1YML031W ATP19P81451 68 aa3.98□□□□□ -1.77
NDC1YML031W RAV2Q03956 351 aa3.98□□□□□ -1.77
NDC1YML031W IZH3Q07959 543 aa3.98□□□□□ -1.77
NDC1YML031W SCS22Q6Q595 175 aa3.98□□□□□ -1.77
NDC1YML031W NOP1P15646 327 aaKnown RBP3.98□□□□□ -1.77
NDC1YML031W ERS1P17261 260 aa3.98□□□□□ -1.77
NDC1YML031W MIC12P38341 106 aa3.98□□□□□ -1.77
NDC1YML031W YHR173CP38864 112 aa3.98□□□□□ -1.77
NDC1YML031W MSL1P40567 111 aaPredicted RBP3.98□□□□□ -1.77
NDC1YML031W YGL118CP53132 145 aa3.98□□□□□ -1.77
NDC1YML031W IRC23Q08416 157 aa3.98□□□□□ -1.77
NDC1YML031W PIS1P06197 220 aaKnown RBP3.97□□□□□ -1.77
NDC1YML031W TIR1P10863 254 aa3.97□□□□□ -1.77
NDC1YML031W SOH1P38633 127 aa3.97□□□□□ -1.77
NDC1YML031W YAR068WP39564 161 aa3.97□□□□□ -1.77
NDC1YML031W YNL200CP40165 246 aaKnown RBP3.97□□□□□ -1.77
NDC1YML031W LST8P41318 303 aa3.97□□□□□ -1.77
NDC1YML031W SDS23P53172 527 aa3.97□□□□□ -1.77
NDC1YML031W BRP1P53194 125 aa3.97□□□□□ -1.77
NDC1YML031W YNR071CP53757 342 aa3.97□□□□□ -1.77
NDC1YML031W GIM5Q04493 163 aa3.97□□□□□ -1.77
NDC1YML031W DDI2P0CH63 225 aa3.96□□□□□ -1.77
NDC1YML031W DDI3P0CH64 225 aa3.96□□□□□ -1.77
NDC1YML031W HSP12P22943 109 aaKnown RBP3.96□□□□□ -1.77
NDC1YML031W AIM29P36154 155 aa3.96□□□□□ -1.77
NDC1YML031W RPF1P38805 295 aaKnown RBP3.96□□□□□ -1.77
NDC1YML031W HUA1P40325 198 aa3.96□□□□□ -1.77
NDC1YML031W FIT2Q08906 153 aa3.96□□□□□ -1.77
NDC1YML031W SAL1D6W196 494 aa3.96□□□□□ -1.78
NDC1YML031W MBF1O14467 151 aaKnown RBP3.96□□□□□ -1.78
NDC1YML031W FYV4P38783 130 aaPredicted RBP3.96□□□□□ -1.78
NDC1YML031W SEC72P39742 193 aaKnown RBP3.96□□□□□ -1.78
NDC1YML031W YPI1P43587 155 aa3.96□□□□□ -1.78
NDC1YML031W COX16P47081 118 aa3.96□□□□□ -1.78
NDC1YML031W YDL183CP48569 320 aa3.96□□□□□ -1.78
NDC1YML031W CAX4P53223 239 aa3.96□□□□□ -1.78
NDC1YML031W TOM7P53507 60 aa3.96□□□□□ -1.78
NDC1YML031W RPL23AP0CX41 137 aaKnown RBP3.95□□□□□ -1.78
NDC1YML031W RPL23BP0CX42 137 aaKnown RBP3.95□□□□□ -1.78
NDC1YML031W FZF1P32805 299 aa3.95□□□□□ -1.78
NDC1YML031W SSU72P53538 206 aaPredicted RBP3.95□□□□□ -1.78
NDC1YML031W NCE103P53615 221 aa3.95□□□□□ -1.78
NDC1YML031W ARC18Q05933 178 aaKnown RBP3.95□□□□□ -1.78
NDC1YML031W FSF1Q12029 327 aaKnown RBP3.95□□□□□ -1.78
NDC1YML031W FPR2P32472 135 aa3.94□□□□□ -1.78
NDC1YML031W YKR070WP36151 352 aaKnown RBP3.94□□□□□ -1.78
NDC1YML031W BDH1P39714 382 aa3.94□□□□□ -1.78
NDC1YML031W POP3P53833 195 aaPredicted RBP3.94□□□□□ -1.78
NDC1YML031W SWT21P53873 357 aaPredicted RBP3.94□□□□□ -1.78
NDC1YML031W TAR1Q8TGM6 124 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms