RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C MRPL31P14063 131 aaPredicted RBP7.18□□□□□ -1.26
SEC61YLR378C RRG8Q06109 277 aa7.18□□□□□ -1.26
SEC61YLR378C IZH3Q07959 543 aa7.18□□□□□ -1.26
SEC61YLR378C YOL160WQ08321 113 aa7.18□□□□□ -1.26
SEC61YLR378C CSM4Q08955 156 aa7.18□□□□□ -1.26
SEC61YLR378C YLR342W-AQ3E810 57 aa7.18□□□□□ -1.26
SEC61YLR378C PAU7P39545 55 aa7.18□□□□□ -1.26
SEC61YLR378C CGR1P53188 120 aa7.18□□□□□ -1.26
SEC61YLR378C MRPL23Q12487 163 aaPredicted RBP7.18□□□□□ -1.26
SEC61YLR378C YMR141CP40211 102 aa7.17□□□□□ -1.26
SEC61YLR378C LCB3P47013 409 aa7.17□□□□□ -1.26
SEC61YLR378C UPS3Q04006 179 aa7.17□□□□□ -1.26
SEC61YLR378C YPR063CQ12160 140 aa7.17□□□□□ -1.26
SEC61YLR378C YOR097CQ12274 175 aaPredicted RBP7.17□□□□□ -1.26
SEC61YLR378C TDA4P47153 279 aa7.16□□□□□ -1.26
SEC61YLR378C DUG3P53871 357 aa7.16□□□□□ -1.26
SEC61YLR378C ATG39Q06159 398 aa7.16□□□□□ -1.26
SEC61YLR378C CPT1P17898 393 aa7.15□□□□□ -1.27
SEC61YLR378C YDL186WP48568 277 aa7.15□□□□□ -1.27
SEC61YLR378C SDS23P53172 527 aa7.15□□□□□ -1.27
SEC61YLR378C ATG33Q06485 197 aa7.15□□□□□ -1.27
SEC61YLR378C YPL162CQ12042 273 aa7.15□□□□□ -1.27
SEC61YLR378C YDR215CQ12240 137 aa7.15□□□□□ -1.27
SEC61YLR378C TMA17Q12513 150 aa7.15□□□□□ -1.27
SEC61YLR378C COA6Q3E846 104 aa7.15□□□□□ -1.27
SEC61YLR378C RPL12AP0CX53 165 aaKnown RBP7.14□□□□□ -1.27
SEC61YLR378C RPL12BP0CX54 165 aa7.14□□□□□ -1.27
SEC61YLR378C THG1P53215 237 aaKnown RBP7.14□□□□□ -1.27
SEC61YLR378C YIP3P53633 176 aa7.14□□□□□ -1.27
SEC61YLR378C YPR013CQ12145 317 aa7.14□□□□□ -1.27
SEC61YLR378C WIP1Q2V2P8 89 aa7.14□□□□□ -1.27
SEC61YLR378C YER190C-BP0CX94 160 aa7.13□□□□□ -1.27
SEC61YLR378C YEL077W-AP0CX95 160 aa7.13□□□□□ -1.27
SEC61YLR378C YGR296C-BP0CX96 160 aa7.13□□□□□ -1.27
SEC61YLR378C YPL283W-BP0CX97 160 aa7.13□□□□□ -1.27
SEC61YLR378C YPR204C-AP0CX98 160 aa7.13□□□□□ -1.27
SEC61YLR378C MST28P39552 234 aa7.13□□□□□ -1.27
SEC61YLR378C PRE5P40302 234 aaKnown RBP7.13□□□□□ -1.27
SEC61YLR378C COX16P47081 118 aa7.13□□□□□ -1.27
SEC61YLR378C LSM8P47093 109 aaKnown RBP7.13□□□□□ -1.27
SEC61YLR378C MST27P53176 234 aa7.13□□□□□ -1.27
SEC61YLR378C CAX4P53223 239 aa7.13□□□□□ -1.27
SEC61YLR378C GTO3Q04806 366 aa7.13□□□□□ -1.27
SEC61YLR378C YOR011W-AQ3E807 68 aa7.13□□□□□ -1.27
SEC61YLR378C MDM10P18409 493 aa7.12□□□□□ -1.27
SEC61YLR378C ZRT1P32804 376 aa7.12□□□□□ -1.27
SEC61YLR378C FIP1P45976 327 aa7.12□□□□□ -1.27
SEC61YLR378C TIM22Q12328 207 aa7.12□□□□□ -1.27
SEC61YLR378C YCR024C-BQ3E7Z8 88 aa7.12□□□□□ -1.27
SEC61YLR378C RPL23AP0CX41 137 aaKnown RBP7.11□□□□□ -1.27
SEC61YLR378C RPL23BP0CX42 137 aaKnown RBP7.11□□□□□ -1.27
SEC61YLR378C PRY2P36110 329 aa7.11□□□□□ -1.27
SEC61YLR378C DIA1P54005 336 aa7.11□□□□□ -1.27
SEC61YLR378C YNL146C-AQ3E7Z1 64 aa7.11□□□□□ -1.27
SEC61YLR378C SEC4P07560 215 aaKnown RBP7.1□□□□□ -1.27
SEC61YLR378C RPL27AP0C2H6 136 aaKnown RBP7.1□□□□□ -1.27
SEC61YLR378C MRPL11P36521 249 aaPredicted RBP7.1□□□□□ -1.27
SEC61YLR378C RPA43P46669 326 aa7.1□□□□□ -1.27
SEC61YLR378C YJR096WP47137 282 aa7.1□□□□□ -1.27
SEC61YLR378C OST3P48439 350 aa7.1□□□□□ -1.27
SEC61YLR378C YGL118CP53132 145 aa7.1□□□□□ -1.27
SEC61YLR378C YGR017WP53210 297 aa7.1□□□□□ -1.27
SEC61YLR378C SEN15Q04675 128 aa7.1□□□□□ -1.27
SEC61YLR378C PRM7Q12459 698 aa7.1□□□□□ -1.27
SEC61YLR378C YFL068WP0CX99 160 aa7.1□□□□□ -1.27
SEC61YLR378C YLL066W-AP0CY00 160 aa7.1□□□□□ -1.27
SEC61YLR378C YLL067W-AP0CY01 160 aa7.1□□□□□ -1.27
SEC61YLR378C SAP30P38429 201 aa7.1□□□□□ -1.27
SEC61YLR378C YHR140WP38842 239 aa7.1□□□□□ -1.27
SEC61YLR378C SEC72P39742 193 aaKnown RBP7.1□□□□□ -1.27
SEC61YLR378C SPI1P40092 148 aa7.1□□□□□ -1.27
SEC61YLR378C MRPL49P40858 161 aaPredicted RBP7.1□□□□□ -1.27
SEC61YLR378C YGR025WP53216 100 aa7.1□□□□□ -1.27
SEC61YLR378C FSF1Q12029 327 aaKnown RBP7.1□□□□□ -1.27
SEC61YLR378C VMA16P23968 213 aa7.09□□□□□ -1.28
SEC61YLR378C GPI19Q04082 140 aa7.09□□□□□ -1.28
SEC61YLR378C ARC18Q05933 178 aaKnown RBP7.09□□□□□ -1.28
SEC61YLR378C YIL134C-AQ45U18 67 aa7.09□□□□□ -1.28
SEC61YLR378C YGR035W-AQ45U48 73 aa7.09□□□□□ -1.28
SEC61YLR378C YHR212W-AP0CX91 67 aa7.08□□□□□ -1.28
SEC61YLR378C YHR022CP38763 256 aa7.08□□□□□ -1.28
SEC61YLR378C MSA1Q08471 629 aa7.08□□□□□ -1.28
SEC61YLR378C CCW12Q12127 133 aa7.08□□□□□ -1.28
SEC61YLR378C SIM1P40472 476 aa7.07□□□□□ -1.28
SEC61YLR378C ALG13P53178 202 aa7.07□□□□□ -1.28
SEC61YLR378C ERG27Q12452 347 aaKnown RBP7.07□□□□□ -1.28
SEC61YLR378C YER134CP40081 178 aa7.06□□□□□ -1.28
SEC61YLR378C YER135CP40082 130 aa7.06□□□□□ -1.28
SEC61YLR378C KEG1P43614 200 aa7.06□□□□□ -1.28
SEC61YLR378C UTR5P32630 166 aa7.05□□□□□ -1.28
SEC61YLR378C YBR144CP34215 104 aa7.05□□□□□ -1.28
SEC61YLR378C TEM1P38987 245 aa7.05□□□□□ -1.28
SEC61YLR378C ECM33P38248 429 aaKnown RBP7.04□□□□□ -1.28
SEC61YLR378C MPC2P38857 129 aa7.04□□□□□ -1.28
SEC61YLR378C MOT3P54785 490 aaKnown RBP7.04□□□□□ -1.28
SEC61YLR378C YMR244WQ04018 355 aa7.04□□□□□ -1.28
SEC61YLR378C GSP1P32835 219 aaKnown RBP7.03□□□□□ -1.28
SEC61YLR378C GSP2P32836 220 aaKnown RBP7.03□□□□□ -1.28
SEC61YLR378C ERV14P53173 138 aa7.03□□□□□ -1.28
SEC61YLR378C TAR1Q8TGM6 124 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms