RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W BUD25P85052 153 aa1.77□□□□□ -2.13
SDC25YLL016W AIM11P87275 137 aa1.77□□□□□ -2.13
SDC25YLL016W AIM36Q03798 255 aa1.77□□□□□ -2.13
SDC25YLL016W YMR253CQ04835 414 aa1.77□□□□□ -2.13
SDC25YLL016W SYM1Q06563 197 aa1.77□□□□□ -2.13
SDC25YLL016W CCW14O13547 238 aa1.77□□□□□ -2.13
SDC25YLL016W MRPS9P38120 278 aa1.77□□□□□ -2.13
SDC25YLL016W RGI1P40043 161 aaPredicted RBP1.77□□□□□ -2.13
SDC25YLL016W NSA2P40078 261 aaKnown RBP1.77□□□□□ -2.13
SDC25YLL016W YNL033WP53964 284 aa1.77□□□□□ -2.13
SDC25YLL016W YNL019CP53975 284 aa1.77□□□□□ -2.13
SDC25YLL016W YOR304C-AO14468 76 aa1.76□□□□□ -2.13
SDC25YLL016W AHT1P29589 182 aa1.76□□□□□ -2.13
SDC25YLL016W PAM17P36147 197 aa1.76□□□□□ -2.13
SDC25YLL016W SPC25P40014 221 aa1.76□□□□□ -2.13
SDC25YLL016W YIL059CP40520 121 aa1.76□□□□□ -2.13
SDC25YLL016W ALB1P47019 175 aaPredicted RBP1.76□□□□□ -2.13
SDC25YLL016W YLR118CQ12354 227 aa1.76□□□□□ -2.13
SDC25YLL016W SFT1P43682 97 aa1.76□□□□□ -2.13
SDC25YLL016W SHH3Q04487 196 aa1.76□□□□□ -2.13
SDC25YLL016W FSF1Q12029 327 aaKnown RBP1.76□□□□□ -2.13
SDC25YLL016W MDN1Q12019 4910 aaKnown RBP1.76□□□□□ -2.13
SDC25YLL016W UGX2P32772 223 aa1.75□□□□□ -2.13
SDC25YLL016W PIR5P46999 287 aa1.75□□□□□ -2.13
SDC25YLL016W ATO3Q12359 275 aa1.75□□□□□ -2.13
SDC25YLL016W YLR099W-AQ3E798 87 aa1.75□□□□□ -2.13
SDC25YLL016W YFR010W-AP0C5N0 62 aa1.75□□□□□ -2.13
SDC25YLL016W YET1P35723 206 aa1.75□□□□□ -2.13
SDC25YLL016W MID2P36027 376 aa1.75□□□□□ -2.13
SDC25YLL016W YGR017WP53210 297 aa1.75□□□□□ -2.13
SDC25YLL016W RRT7Q07829 113 aa1.75□□□□□ -2.13
SDC25YLL016W YOR268CQ08734 132 aa1.75□□□□□ -2.13
SDC25YLL016W FZF1P32805 299 aa1.75□□□□□ -2.13
SDC25YLL016W YIR035CP40579 254 aa1.75□□□□□ -2.13
SDC25YLL016W LIP1Q03579 150 aa1.75□□□□□ -2.13
SDC25YLL016W RIM9Q04734 239 aa1.75□□□□□ -2.13
SDC25YLL016W DDP1Q99321 188 aaKnown RBP1.75□□□□□ -2.13
SDC25YLL016W YNL200CP40165 246 aaKnown RBP1.74□□□□□ -2.13
SDC25YLL016W SMD3P43321 101 aaKnown RBP1.74□□□□□ -2.13
SDC25YLL016W GRX5Q02784 150 aa1.74□□□□□ -2.13
SDC25YLL016W RUB1Q03919 77 aa1.74□□□□□ -2.13
SDC25YLL016W ATP20Q12233 115 aa1.74□□□□□ -2.13
SDC25YLL016W SLH1P53327 1967 aaKnown RBP1.74□□□□□ -2.13
SDC25YLL016W HSP12P22943 109 aaKnown RBP1.74□□□□□ -2.13
SDC25YLL016W SHB17P36136 271 aaKnown RBP1.74□□□□□ -2.13
SDC25YLL016W DDI2P0CH63 225 aa1.73□□□□□ -2.13
SDC25YLL016W DDI3P0CH64 225 aa1.73□□□□□ -2.13
SDC25YLL016W GPA2P10823 449 aa1.73□□□□□ -2.13
SDC25YLL016W RRT1P38192 103 aa1.73□□□□□ -2.13
SDC25YLL016W YHL037CP38733 133 aa1.73□□□□□ -2.13
SDC25YLL016W HYR1P40581 163 aaKnown RBP1.73□□□□□ -2.13
SDC25YLL016W RPL33BP41056 107 aaKnown RBP1.73□□□□□ -2.13
SDC25YLL016W MPC3P53311 146 aa1.73□□□□□ -2.13
SDC25YLL016W YNR062CP53748 327 aa1.73□□□□□ -2.13
SDC25YLL016W YNR064CP53750 290 aa1.73□□□□□ -2.13
SDC25YLL016W YNR077CP53758 84 aa1.73□□□□□ -2.13
SDC25YLL016W IRC23Q08416 157 aa1.73□□□□□ -2.13
SDC25YLL016W YBL010CP32788 280 aa1.73□□□□□ -2.13
SDC25YLL016W YKR070WP36151 352 aaKnown RBP1.73□□□□□ -2.13
SDC25YLL016W ETR1P38071 380 aa1.73□□□□□ -2.13
SDC25YLL016W SPG1P50088 95 aa1.73□□□□□ -2.13
SDC25YLL016W TMA23Q03525 211 aa1.73□□□□□ -2.13
SDC25YLL016W PIN3Q06449 215 aa1.73□□□□□ -2.13
SDC25YLL016W UIP4Q08926 304 aa1.73□□□□□ -2.13
SDC25YLL016W TRS20P38334 175 aa1.73□□□□□ -2.13
SDC25YLL016W YHR180WP38868 163 aa1.73□□□□□ -2.13
SDC25YLL016W SAY1P53324 424 aa1.73□□□□□ -2.13
SDC25YLL016W YSF3P0C074 85 aaPredicted RBP1.72□□□□□ -2.13
SDC25YLL016W YCR101CP25607 182 aa1.72□□□□□ -2.13
SDC25YLL016W YOR062CP36025 268 aa1.72□□□□□ -2.13
SDC25YLL016W SFT2P38166 215 aa1.72□□□□□ -2.13
SDC25YLL016W ANT1Q06497 328 aa1.72□□□□□ -2.13
SDC25YLL016W YPR174CQ06616 221 aaPredicted RBP1.72□□□□□ -2.13
SDC25YLL016W KTI11Q3E840 82 aa1.72□□□□□ -2.13
SDC25YLL016W RPS23AP0CX29 145 aaKnown RBP1.72□□□□□ -2.13
SDC25YLL016W RPS23BP0CX30 145 aa1.72□□□□□ -2.13
SDC25YLL016W NMT1P14743 455 aa1.72□□□□□ -2.13
SDC25YLL016W HYM1P32464 399 aa1.72□□□□□ -2.13
SDC25YLL016W YRA2P36036 203 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SDC25YLL016W RPL14AP36105 138 aaKnown RBP1.72□□□□□ -2.13
SDC25YLL016W RPL14BP38754 138 aaKnown RBP1.72□□□□□ -2.13
SDC25YLL016W GAT4P40569 121 aa1.72□□□□□ -2.13
SDC25YLL016W YHR214C-DP0CX93 97 aa1.71□□□□□ -2.14
SDC25YLL016W SCM4P32564 187 aa1.71□□□□□ -2.14
SDC25YLL016W FYV7Q12247 151 aa1.71□□□□□ -2.14
SDC25YLL016W BPH1P25356 2167 aa1.71□□□□□ -2.14
SDC25YLL016W NOP1P15646 327 aaKnown RBP1.71□□□□□ -2.14
SDC25YLL016W YCR099CP25657 155 aa1.71□□□□□ -2.14
SDC25YLL016W YNL217WP40152 326 aa1.71□□□□□ -2.14
SDC25YLL016W RPS12P48589 143 aaKnown RBP1.71□□□□□ -2.14
SDC25YLL016W DOC1P53068 250 aa1.71□□□□□ -2.14
SDC25YLL016W GEP7P53171 287 aa1.71□□□□□ -2.14
SDC25YLL016W SAE3P89114 91 aa1.71□□□□□ -2.14
SDC25YLL016W YDR102CQ03864 110 aa1.71□□□□□ -2.14
SDC25YLL016W UPS3Q04006 179 aa1.71□□□□□ -2.14
SDC25YLL016W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SDC25YLL016W BUD23P25627 275 aaPredicted RBP1.71□□□□□ -2.14
SDC25YLL016W PHS1P40857 217 aa1.71□□□□□ -2.14
SDC25YLL016W YJL027CP47063 138 aaPredicted RBP1.71□□□□□ -2.14
SDC25YLL016W ELC1Q03071 99 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms