RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W PET191Q02772 108 aa2.81□□□□□ -1.96
PTM1YKL039W CSI2Q08054 341 aa2.81□□□□□ -1.96
PTM1YKL039W MCP1Q12106 302 aa2.81□□□□□ -1.96
PTM1YKL039W PRR2Q12310 699 aa2.81□□□□□ -1.96
PTM1YKL039W UTP23Q12339 254 aaKnown RBP2.81□□□□□ -1.96
PTM1YKL039W HUT1Q12520 339 aa2.81□□□□□ -1.96
PTM1YKL039W MRP49P32388 137 aa2.8□□□□□ -1.96
PTM1YKL039W UTR5P32630 166 aa2.8□□□□□ -1.96
PTM1YKL039W YKL102CP34249 101 aa2.8□□□□□ -1.96
PTM1YKL039W SHB17P36136 271 aaKnown RBP2.8□□□□□ -1.96
PTM1YKL039W YHR180WP38868 163 aa2.8□□□□□ -1.96
PTM1YKL039W YFR045WP43617 309 aa2.8□□□□□ -1.96
PTM1YKL039W XPT1P47165 209 aa2.8□□□□□ -1.96
PTM1YKL039W BRR6P53062 197 aa2.8□□□□□ -1.96
PTM1YKL039W NCE101Q02820 53 aa2.8□□□□□ -1.96
PTM1YKL039W YPL039WQ03080 316 aa2.8□□□□□ -1.96
PTM1YKL039W NAT3Q06504 195 aa2.8□□□□□ -1.96
PTM1YKL039W YOR105WQ08504 108 aa2.8□□□□□ -1.96
PTM1YKL039W CSM4Q08955 156 aa2.8□□□□□ -1.96
PTM1YKL039W SMT3Q12306 101 aaKnown RBP2.8□□□□□ -1.96
PTM1YKL039W COA2Q3E823 68 aa2.8□□□□□ -1.96
PTM1YKL039W YLR365WQ7LIF2 110 aa2.8□□□□□ -1.96
PTM1YKL039W Q0144Q9ZZW2 109 aa2.8□□□□□ -1.96
PTM1YKL039W COX2P00410 251 aa2.79□□□□□ -1.96
PTM1YKL039W AHT1P29589 182 aa2.79□□□□□ -1.96
PTM1YKL039W SPS18P32572 300 aa2.79□□□□□ -1.96
PTM1YKL039W CYB5P40312 120 aa2.79□□□□□ -1.96
PTM1YKL039W CDC40P40968 455 aaPredicted RBP2.79□□□□□ -1.96
PTM1YKL039W GPI2P46961 280 aa2.79□□□□□ -1.96
PTM1YKL039W YLR460CP54007 376 aa2.79□□□□□ -1.96
PTM1YKL039W YML079WQ03629 201 aa2.79□□□□□ -1.96
PTM1YKL039W IRC19Q07843 230 aa2.79□□□□□ -1.96
PTM1YKL039W YAL063C-AQ3E791 96 aa2.79□□□□□ -1.96
PTM1YKL039W RPS22BQ3E7Y3 130 aaKnown RBP2.79□□□□□ -1.96
PTM1YKL039W PAI3P01094 68 aa2.78□□□□□ -1.96
PTM1YKL039W DDI2P0CH63 225 aa2.78□□□□□ -1.96
PTM1YKL039W DDI3P0CH64 225 aa2.78□□□□□ -1.96
PTM1YKL039W YCR025CP25352 136 aa2.78□□□□□ -1.96
PTM1YKL039W PEX4P29340 183 aa2.78□□□□□ -1.96
PTM1YKL039W ERG2P32352 222 aa2.78□□□□□ -1.96
PTM1YKL039W YHL037CP38733 133 aa2.78□□□□□ -1.96
PTM1YKL039W RPA43P46669 326 aa2.78□□□□□ -1.96
PTM1YKL039W ADH6Q04894 360 aaKnown RBP2.78□□□□□ -1.96
PTM1YKL039W LOA1Q06508 300 aa2.78□□□□□ -1.96
PTM1YKL039W PRP11Q07350 266 aaPredicted RBP2.78□□□□□ -1.96
PTM1YKL039W YDL157CQ12082 118 aa2.78□□□□□ -1.96
PTM1YKL039W YOR343CQ12484 108 aa2.78□□□□□ -1.96
PTM1YKL039W ATG40Q99325 256 aa2.78□□□□□ -1.96
PTM1YKL039W SEC4P07560 215 aaKnown RBP2.78□□□□□ -1.96
PTM1YKL039W YPR170W-BP0C5R9 85 aa2.78□□□□□ -1.96
PTM1YKL039W PPA2P28239 310 aa2.78□□□□□ -1.96
PTM1YKL039W GSP1P32835 219 aaKnown RBP2.78□□□□□ -1.96
PTM1YKL039W GSP2P32836 220 aaKnown RBP2.78□□□□□ -1.96
PTM1YKL039W YUH1P35127 236 aa2.78□□□□□ -1.96
PTM1YKL039W SWD2P36104 329 aaPredicted RBP2.78□□□□□ -1.96
PTM1YKL039W LSM2P38203 95 aaKnown RBP2.78□□□□□ -1.96
PTM1YKL039W FIG1P38224 298 aa2.78□□□□□ -1.96
PTM1YKL039W LOC1P43586 204 aaPredicted RBP2.78□□□□□ -1.96
PTM1YKL039W UBC13P52490 153 aa2.78□□□□□ -1.96
PTM1YKL039W UPS3Q04006 179 aa2.78□□□□□ -1.96
PTM1YKL039W MIX14Q04341 121 aa2.78□□□□□ -1.96
PTM1YKL039W ATG39Q06159 398 aa2.78□□□□□ -1.96
PTM1YKL039W PBP4Q07362 185 aaKnown RBP2.78□□□□□ -1.96
PTM1YKL039W RFU1Q08003 200 aa2.78□□□□□ -1.96
PTM1YKL039W YPL162CQ12042 273 aa2.78□□□□□ -1.96
PTM1YKL039W SLO1Q3E784 85 aa2.78□□□□□ -1.96
PTM1YKL039W YPR108W-AQ3E7B3 70 aa2.78□□□□□ -1.96
PTM1YKL039W MRS4P23500 304 aa2.77□□□□□ -1.97
PTM1YKL039W OCH1P31755 480 aa2.77□□□□□ -1.97
PTM1YKL039W YHL044WP38727 235 aa2.77□□□□□ -1.97
PTM1YKL039W TEM1P38987 245 aa2.77□□□□□ -1.97
PTM1YKL039W YER134CP40081 178 aa2.77□□□□□ -1.97
PTM1YKL039W MSL1P40567 111 aaPredicted RBP2.77□□□□□ -1.97
PTM1YKL039W ARP3P47117 449 aaKnown RBP2.77□□□□□ -1.97
PTM1YKL039W YPR147CQ06522 304 aaKnown RBP2.77□□□□□ -1.97
PTM1YKL039W USB1Q12208 290 aaKnown RBP2.77□□□□□ -1.97
PTM1YKL039W HUG1Q6Q5K6 68 aa2.77□□□□□ -1.97
PTM1YKL039W YHR214C-DP0CX93 97 aa2.76□□□□□ -1.97
PTM1YKL039W HMRA1P0CY11 126 aa2.76□□□□□ -1.97
PTM1YKL039W RPL30P14120 105 aaKnown RBP2.76□□□□□ -1.97
PTM1YKL039W RPB7P34087 171 aa2.76□□□□□ -1.97
PTM1YKL039W FYV4P38783 130 aaPredicted RBP2.76□□□□□ -1.97
PTM1YKL039W SEC72P39742 193 aaKnown RBP2.76□□□□□ -1.97
PTM1YKL039W YER188WP40103 239 aa2.76□□□□□ -1.97
PTM1YKL039W YGL230CP53074 147 aa2.76□□□□□ -1.97
PTM1YKL039W GEP7P53171 287 aa2.76□□□□□ -1.97
PTM1YKL039W YPR098CQ06089 161 aa2.76□□□□□ -1.97
PTM1YKL039W YOR186WQ08560 144 aa2.76□□□□□ -1.97
PTM1YKL039W YLR050CQ12155 161 aaKnown RBP2.76□□□□□ -1.97
PTM1YKL039W GEP5Q12393 293 aa2.76□□□□□ -1.97
PTM1YKL039W YLR363W-AQ3E747 85 aa2.76□□□□□ -1.97
PTM1YKL039W CDC39P25655 2108 aaKnown RBP2.76□□□□□ -1.97
PTM1YKL039W BLM10P43583 2143 aa2.75□□□□□ -1.97
PTM1YKL039W CCW14O13547 238 aa2.75□□□□□ -1.97
PTM1YKL039W FCY2P17064 533 aa2.75□□□□□ -1.97
PTM1YKL039W SCO1P23833 295 aa2.75□□□□□ -1.97
PTM1YKL039W RPL16BP26785 198 aaKnown RBP2.75□□□□□ -1.97
PTM1YKL039W MIG1P27705 504 aa2.75□□□□□ -1.97
PTM1YKL039W COX15P40086 486 aa2.75□□□□□ -1.97
PTM1YKL039W CCS1P40202 249 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 116.3 ms