RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W SCW10Q04951 389 aa2.89□□□□□ -1.95
NUP85YJR042W HRT1Q08273 121 aa2.89□□□□□ -1.95
NUP85YJR042W YML100W-AQ8TGT0 57 aa2.89□□□□□ -1.95
NUP85YJR042W RPL40AP0CH08 128 aaKnown RBP2.88□□□□□ -1.95
NUP85YJR042W RPL40BP0CH09 128 aaKnown RBP2.88□□□□□ -1.95
NUP85YJR042W OM14P38325 134 aa2.88□□□□□ -1.95
NUP85YJR042W RPL13BP40212 199 aaKnown RBP2.88□□□□□ -1.95
NUP85YJR042W YCL001W-AP87012 153 aa2.88□□□□□ -1.95
NUP85YJR042W RPL13AQ12690 199 aaPredicted RBP2.88□□□□□ -1.95
NUP85YJR042W YPR014CQ6B0W2 109 aa2.88□□□□□ -1.95
NUP85YJR042W TOM1Q03280 3268 aa2.88□□□□□ -1.95
NUP85YJR042W MIG3P39943 394 aa2.88□□□□□ -1.95
NUP85YJR042W EMC5P40540 141 aa2.88□□□□□ -1.95
NUP85YJR042W EST3Q03096 181 aa2.88□□□□□ -1.95
NUP85YJR042W ATG39Q06159 398 aa2.88□□□□□ -1.95
NUP85YJR042W YPR174CQ06616 221 aaPredicted RBP2.88□□□□□ -1.95
NUP85YJR042W YOL029CQ08187 201 aa2.88□□□□□ -1.95
NUP85YJR042W YOR020W-AQ3E824 90 aa2.88□□□□□ -1.95
NUP85YJR042W FAB1P34756 2278 aa2.87□□□□□ -1.95
NUP85YJR042W VAR1P02381 398 aa2.87□□□□□ -1.95
NUP85YJR042W BET1P22804 142 aa2.87□□□□□ -1.95
NUP85YJR042W TEM1P38987 245 aa2.87□□□□□ -1.95
NUP85YJR042W SPC25P40014 221 aa2.87□□□□□ -1.95
NUP85YJR042W YIR035CP40579 254 aa2.87□□□□□ -1.95
NUP85YJR042W YGR026WP53217 278 aa2.87□□□□□ -1.95
NUP85YJR042W FCF2Q12035 217 aaPredicted RBP2.87□□□□□ -1.95
NUP85YJR042W YNL277W-AQ3E7Z0 62 aa2.87□□□□□ -1.95
NUP85YJR042W YAL067W-AQ8TGK6 75 aa2.87□□□□□ -1.95
NUP85YJR042W COX10P21592 462 aa2.87□□□□□ -1.95
NUP85YJR042W SRP21P32342 167 aa2.87□□□□□ -1.95
NUP85YJR042W UMP1P38293 148 aa2.87□□□□□ -1.95
NUP85YJR042W YFL067WP43537 175 aa2.87□□□□□ -1.95
NUP85YJR042W YGR017WP53210 297 aa2.87□□□□□ -1.95
NUP85YJR042W FIT1Q04433 528 aa2.87□□□□□ -1.95
NUP85YJR042W SCP1Q08873 200 aa2.87□□□□□ -1.95
NUP85YJR042W YOR343CQ12484 108 aa2.87□□□□□ -1.95
NUP85YJR042W YOR376W-AQ3E805 51 aa2.87□□□□□ -1.95
NUP85YJR042W YHR180WP38868 163 aa2.86□□□□□ -1.95
NUP85YJR042W GPI2P46961 280 aa2.86□□□□□ -1.95
NUP85YJR042W LSM8P47093 109 aaKnown RBP2.86□□□□□ -1.95
NUP85YJR042W GEP7P53171 287 aa2.86□□□□□ -1.95
NUP85YJR042W YDR102CQ03864 110 aa2.86□□□□□ -1.95
NUP85YJR042W YPR063CQ12160 140 aa2.86□□□□□ -1.95
NUP85YJR042W YLR146W-AQ2V2P1 62 aa2.86□□□□□ -1.95
NUP85YJR042W YLR412C-AQ3E742 68 aa2.86□□□□□ -1.95
NUP85YJR042W MSW1P04803 379 aa2.85□□□□□ -1.95
NUP85YJR042W ATG8P38182 117 aaRIP-Chip data2.85□□□□□ -1.95not detected
NUP85YJR042W ERV15P38312 142 aa2.85□□□□□ -1.95
NUP85YJR042W YEA6P39953 335 aa2.85□□□□□ -1.95
NUP85YJR042W VPS28Q02767 242 aa2.85□□□□□ -1.95
NUP85YJR042W RRT7Q07829 113 aa2.85□□□□□ -1.95
NUP85YJR042W IRC19Q07843 230 aa2.85□□□□□ -1.95
NUP85YJR042W YPL264CQ08980 353 aa2.85□□□□□ -1.95
NUP85YJR042W FCY1Q12178 158 aa2.85□□□□□ -1.95
NUP85YJR042W COX19Q3E731 98 aa2.85□□□□□ -1.95
NUP85YJR042W FAS1P07149 2051 aaKnown RBP2.85□□□□□ -1.95
NUP85YJR042W YAR023CD6VPM8 179 aa2.85□□□□□ -1.95
NUP85YJR042W RPL9AP05738 191 aaKnown RBP2.85□□□□□ -1.95
NUP85YJR042W YSF3P0C074 85 aaPredicted RBP2.85□□□□□ -1.95
NUP85YJR042W DDR48P18899 430 aaKnown RBP2.85□□□□□ -1.95
NUP85YJR042W CLB6P32943 380 aa2.85□□□□□ -1.95
NUP85YJR042W RPL9BP51401 191 aaKnown RBP2.85□□□□□ -1.95
NUP85YJR042W YMR253CQ04835 414 aa2.85□□□□□ -1.95
NUP85YJR042W FCF1Q05498 189 aaPredicted RBP2.85□□□□□ -1.95
NUP85YJR042W PBA1Q05778 276 aa2.85□□□□□ -1.95
NUP85YJR042W YPR145C-AQ2V2P0 78 aa2.85□□□□□ -1.95
NUP85YJR042W TAO3P40468 2376 aa2.85□□□□□ -1.95
NUP85YJR042W MRS4P23500 304 aa2.84□□□□□ -1.95
NUP85YJR042W RPS27AP35997 82 aaKnown RBP2.84□□□□□ -1.95
NUP85YJR042W SRX1P36077 127 aa2.84□□□□□ -1.95
NUP85YJR042W RPS27BP38711 82 aa2.84□□□□□ -1.95
NUP85YJR042W YER188WP40103 239 aa2.84□□□□□ -1.95
NUP85YJR042W NSE4P43124 402 aa2.84□□□□□ -1.95
NUP85YJR042W YGL118CP53132 145 aa2.84□□□□□ -1.95
NUP85YJR042W MPC3P53311 146 aa2.84□□□□□ -1.95
NUP85YJR042W ADH3P07246 375 aaKnown RBP2.84□□□□□ -1.96
NUP85YJR042W YFR010W-AP0C5N0 62 aa2.84□□□□□ -1.96
NUP85YJR042W URA5P13298 226 aaKnown RBP2.84□□□□□ -1.96
NUP85YJR042W MRPL15P36523 253 aa2.84□□□□□ -1.96
NUP85YJR042W YPT31P38555 223 aaKnown RBP2.84□□□□□ -1.96
NUP85YJR042W PAU15P40585 124 aa2.84□□□□□ -1.96
NUP85YJR042W VMA21P41806 77 aa2.84□□□□□ -1.96
NUP85YJR042W DAN1P47178 298 aa2.84□□□□□ -1.96
NUP85YJR042W ATP20Q12233 115 aa2.84□□□□□ -1.96
NUP85YJR042W BOL1Q3E793 110 aa2.84□□□□□ -1.96
NUP85YJR042W SEC59P20048 519 aa2.83□□□□□ -1.96
NUP85YJR042W AHT1P29589 182 aa2.83□□□□□ -1.96
NUP85YJR042W SDH4P37298 181 aa2.83□□□□□ -1.96
NUP85YJR042W YBR292CP38357 123 aa2.83□□□□□ -1.96
NUP85YJR042W KRE9P39005 276 aa2.83□□□□□ -1.96
NUP85YJR042W RRT13P40042 185 aa2.83□□□□□ -1.96
NUP85YJR042W GNA1P43577 159 aaPredicted RBP2.83□□□□□ -1.96
NUP85YJR042W CIS3P47001 227 aa2.83□□□□□ -1.96
NUP85YJR042W YGL193CP53097 103 aa2.83□□□□□ -1.96
NUP85YJR042W YTH1Q06102 208 aaPredicted RBP2.83□□□□□ -1.96
NUP85YJR042W HUT1Q12520 339 aa2.83□□□□□ -1.96
NUP85YJR042W CDC39P25655 2108 aaKnown RBP2.83□□□□□ -1.96
NUP85YJR042W HSP150P32478 413 aa2.83□□□□□ -1.96
NUP85YJR042W BRR2P32639 2163 aaKnown RBP2.83□□□□□ -1.96
NUP85YJR042W YAR029WP39549 74 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms