RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT3	YIL038C	Q0297	Q9ZZV8	51 aa		4.12	□□□□□ -1.75
NOT3	YIL038C	SPO13	P23624	291 aa		4.12	□□□□□ -1.75
NOT3	YIL038C	VMA21	P41806	77 aa		4.12	□□□□□ -1.75
NOT3	YIL038C	CRH1	P53301	507 aa		4.12	□□□□□ -1.75
NOT3	YIL038C	UPS3	Q04006	179 aa		4.12	□□□□□ -1.75
NOT3	YIL038C	YLR342W-A	Q3E810	57 aa		4.12	□□□□□ -1.75
NOT3	YIL038C	RPL23A	P0CX41	137 aa	Known RBP	4.11	□□□□□ -1.75
NOT3	YIL038C	RPL23B	P0CX42	137 aa	Known RBP	4.11	□□□□□ -1.75
NOT3	YIL038C	ZRT1	P32804	376 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	SFT2	P38166	215 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	YIL012W	P40551	113 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	LCB3	P47013	409 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	SNO1	Q03144	224 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	YPL162C	Q12042	273 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	YCL048W-A	Q2V2Q2	79 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	YOS1	Q3E834	85 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	FMP49	A0A023PZB3	126 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	YJR015W	P47090	510 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	FIT2	Q08906	153 aa		4.11	□□□□□ -1.75
NOT3	YIL038C	DER1	P38307	211 aa		4.1	□□□□□ -1.75
NOT3	YIL038C	DYN2	Q02647	92 aa		4.1	□□□□□ -1.75
NOT3	YIL038C	PRY2	P36110	329 aa		4.1	□□□□□ -1.75
NOT3	YIL038C	YKR041W	P36134	250 aa		4.1	□□□□□ -1.75
NOT3	YIL038C	IMP2	P46972	177 aa		4.1	□□□□□ -1.75
NOT3	YIL038C	POC4	Q12245	148 aa	Predicted RBP	4.1	□□□□□ -1.75
NOT3	YIL038C	FMP27	Q06179	2628 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	YHR213W	P0CI67	198 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	URA5	P13298	226 aa	Known RBP	4.09	□□□□□ -1.75
NOT3	YIL038C	YKR045C	P36138	183 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	POR2	P40478	281 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	CPD1	P53314	239 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	YMR007W	Q03675	126 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	POM33	Q12164	279 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	DCN1	Q12395	269 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	YER078W-A	Q3E7A2	54 aa		4.09	□□□□□ -1.75
NOT3	YIL038C	CPT1	P17898	393 aa		4.09	□□□□□ -1.76
NOT3	YIL038C	CTR2	P38865	189 aa		4.09	□□□□□ -1.76
NOT3	YIL038C	SNF11	P38956	169 aa		4.09	□□□□□ -1.76
NOT3	YIL038C	YPS5	P53057	165 aa		4.09	□□□□□ -1.76
NOT3	YIL038C	CUE4	Q04201	117 aa	Predicted RBP	4.09	□□□□□ -1.76
NOT3	YIL038C	CDC39	P25655	2108 aa	Known RBP	4.08	□□□□□ -1.76
NOT3	YIL038C	YBR121C-A	P0C5L4	52 aa		4.08	□□□□□ -1.76
NOT3	YIL038C	YJL027C	P47063	138 aa	Predicted RBP	4.08	□□□□□ -1.76
NOT3	YIL038C	SMT3	Q12306	101 aa	Known RBP	4.08	□□□□□ -1.76
NOT3	YIL038C	UTR5	P32630	166 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	VMA11	P32842	164 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	RPB11	P38902	120 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	YPI1	P43587	155 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	YNL234W	P53857	426 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	SWT21	P53873	357 aa	Predicted RBP	4.07	□□□□□ -1.76
NOT3	YIL038C	DAD3	P69850	94 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	MSA1	Q08471	629 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	YOR105W	Q08504	108 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	SRP14	P38985	146 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	SPG4	Q04438	115 aa		4.07	□□□□□ -1.76
NOT3	YIL038C	YBR056W-A	I2HB52	66 aa		4.06	□□□□□ -1.76
NOT3	YIL038C	MRPL38	P35996	138 aa	Predicted RBP	4.06	□□□□□ -1.76
NOT3	YIL038C	OST3	P48439	350 aa		4.06	□□□□□ -1.76
NOT3	YIL038C	CCW12	Q12127	133 aa		4.06	□□□□□ -1.76
NOT3	YIL038C	FYV7	Q12247	151 aa		4.06	□□□□□ -1.76
NOT3	YIL038C	RPB9	P27999	122 aa		4.06	□□□□□ -1.76
NOT3	YIL038C	LSM8	P47093	109 aa	Known RBP	4.06	□□□□□ -1.76
NOT3	YIL038C	PRM3	Q08931	133 aa		4.06	□□□□□ -1.76
NOT3	YIL038C	TRP1	P00912	224 aa		4.05	□□□□□ -1.76
NOT3	YIL038C	MRS4	P23500	304 aa		4.05	□□□□□ -1.76
NOT3	YIL038C	RPL14A	P36105	138 aa	Known RBP	4.05	□□□□□ -1.76
NOT3	YIL038C	RPL14B	P38754	138 aa	Known RBP	4.05	□□□□□ -1.76
NOT3	YIL038C	YAL063C-A	Q3E791	96 aa		4.05	□□□□□ -1.76
NOT3	YIL038C	YCR043C	P25361	127 aa		4.05	□□□□□ -1.76
NOT3	YIL038C	PAU7	P39545	55 aa		4.05	□□□□□ -1.76
NOT3	YIL038C	PEX22	P39718	180 aa		4.05	□□□□□ -1.76
NOT3	YIL038C	YGR026W	P53217	278 aa		4.05	□□□□□ -1.76
NOT3	YIL038C	YOR097C	Q12274	175 aa	Predicted RBP	4.05	□□□□□ -1.76
NOT3	YIL038C	RPL16B	P26785	198 aa	Known RBP	4.04	□□□□□ -1.76
NOT3	YIL038C	FYV4	P38783	130 aa	Predicted RBP	4.04	□□□□□ -1.76
NOT3	YIL038C	DSK2	P48510	373 aa		4.04	□□□□□ -1.76
NOT3	YIL038C	YDR114C	Q04597	100 aa		4.04	□□□□□ -1.76
NOT3	YIL038C	YNL146C-A	Q3E7Z1	64 aa		4.04	□□□□□ -1.76
NOT3	YIL038C	YBR013C	P38215	129 aa		4.04	□□□□□ -1.76
NOT3	YIL038C	ARC18	Q05933	178 aa	Known RBP	4.04	□□□□□ -1.76
NOT3	YIL038C	DXO1	Q06349	442 aa		4.04	□□□□□ -1.76
NOT3	YIL038C	CUP1-1	P0CX80	61 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	CUP1-2	P0CX81	61 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	YER188W	P40103	239 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	VPS55	P47111	140 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	HOR7	Q05827	59 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	ATG39	Q06159	398 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	LSM4	P40070	187 aa	Known RBP	4.03	□□□□□ -1.76
NOT3	YIL038C	BLM10	P43583	2143 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	CAB4	P53332	305 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	CYT2	Q00873	224 aa		4.03	□□□□□ -1.76
NOT3	YIL038C	YGL118C	P53132	145 aa		4.02	□□□□□ -1.77
NOT3	YIL038C	DPP1	Q05521	289 aa		4.02	□□□□□ -1.77
NOT3	YIL038C	CNL1	Q06333	122 aa		4.02	□□□□□ -1.77
NOT3	YIL038C	TMC1	Q08422	150 aa	Predicted RBP	4.02	□□□□□ -1.77
NOT3	YIL038C	ATO3	Q12359	275 aa		4.02	□□□□□ -1.77
NOT3	YIL038C	CDC43	P18898	376 aa		4.02	□□□□□ -1.77
NOT3	YIL038C	GLE2	P40066	365 aa		4.02	□□□□□ -1.77
NOT3	YIL038C	NSE4	P43124	402 aa		4.02	□□□□□ -1.77
NOT3	YIL038C	MIC26	P50087	233 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms