RNA–Protein interactions for RNA: YGL166W

CUP2, Transcript of Copper-binding transcription factor, yeast

Gene CUP2, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUP2	YGL166W	VMA9	Q3E7B6	73 aa		4.63	□□□□□ -1.67
CUP2	YGL166W	PCC1	Q3E833	88 aa		4.63	□□□□□ -1.67
CUP2	YGL166W	RRT13	P40042	185 aa		4.62	□□□□□ -1.67
CUP2	YGL166W	YFR045W	P43617	309 aa		4.62	□□□□□ -1.67
CUP2	YGL166W	YGL185C	P53100	379 aa		4.62	□□□□□ -1.67
CUP2	YGL166W	DIA1	P54005	336 aa		4.62	□□□□□ -1.67
CUP2	YGL166W	ISU2	Q12056	156 aa		4.62	□□□□□ -1.67
CUP2	YGL166W	UTP23	Q12339	254 aa	Known RBP	4.62	□□□□□ -1.67
CUP2	YGL166W	STF1	P01098	86 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	POF1	P25576	258 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	AGA1	P32323	725 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	PGD1	P40356	397 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	YDL183C	P48569	320 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	YGR017W	P53210	297 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	ATP19	P81451	68 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	YDR366C	P87287	132 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	SMT3	Q12306	101 aa	Known RBP	4.61	□□□□□ -1.67
CUP2	YGL166W	TIM22	Q12328	207 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	YBR200W-A	Q3E755	54 aa		4.61	□□□□□ -1.67
CUP2	YGL166W	YPT53	P36019	220 aa		4.6	□□□□□ -1.67
CUP2	YGL166W	YNL217W	P40152	326 aa		4.6	□□□□□ -1.67
CUP2	YGL166W	COX16	P47081	118 aa		4.6	□□□□□ -1.67
CUP2	YGL166W	YML108W	Q03759	105 aa		4.6	□□□□□ -1.67
CUP2	YGL166W	UPS3	Q04006	179 aa		4.6	□□□□□ -1.67
CUP2	YGL166W	YPR053C	Q6Q5F3	151 aa		4.6	□□□□□ -1.67
CUP2	YGL166W	YCL001W-B	Q96VH2	84 aa		4.6	□□□□□ -1.67
CUP2	YGL166W	RPL12A	P0CX53	165 aa	Known RBP	4.59	□□□□□ -1.67
CUP2	YGL166W	RPL12B	P0CX54	165 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	MRPL28	P36527	147 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	BRP1	P53194	125 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	AIM34	Q03673	198 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	CRC1	Q12289	327 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	TY1A-DR3	Q12441	440 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	TY1A-NL2	Q12470	440 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	TMA7	Q3E764	64 aa	Known RBP	4.59	□□□□□ -1.67
CUP2	YGL166W	YGR240C-A	Q3E786	66 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	Q0142	Q9ZZW4	58 aa		4.59	□□□□□ -1.67
CUP2	YGL166W	FMP49	A0A023PZB3	126 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	TIR1	P10863	254 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	SEC59	P20048	519 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	SRP21	P32342	167 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	SRB6	P32570	121 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	SRP14	P38985	146 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	KRE9	P39005	276 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	PHS1	P40857	217 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	YCH1	P42937	148 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	TIM21	P53220	239 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	ATP23	P53722	227 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	YPR195C	Q06594	109 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	CSM4	Q08955	156 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	DCN1	Q12395	269 aa		4.58	□□□□□ -1.68
CUP2	YGL166W	LDS1	P31379	325 aa		4.57	□□□□□ -1.68
CUP2	YGL166W	ELF1	P36053	145 aa		4.57	□□□□□ -1.68
CUP2	YGL166W	RPB11	P38902	120 aa		4.57	□□□□□ -1.68
CUP2	YGL166W	IRC22	P40006	225 aa		4.57	□□□□□ -1.68
CUP2	YGL166W	YGR026W	P53217	278 aa		4.57	□□□□□ -1.68
CUP2	YGL166W	DXO1	Q06349	442 aa		4.57	□□□□□ -1.68
CUP2	YGL166W	YLR042C	Q07990	161 aa		4.57	□□□□□ -1.68
CUP2	YGL166W	MRPL31	P14063	131 aa	Predicted RBP	4.56	□□□□□ -1.68
CUP2	YGL166W	QRI5	P32344	111 aa		4.56	□□□□□ -1.68
CUP2	YGL166W	SUR2	P38992	349 aa		4.56	□□□□□ -1.68
CUP2	YGL166W	GAT4	P40569	121 aa		4.56	□□□□□ -1.68
CUP2	YGL166W	BNS1	P50084	137 aa		4.56	□□□□□ -1.68
CUP2	YGL166W	MGA1	P53050	456 aa		4.56	□□□□□ -1.68
CUP2	YGL166W	GIM5	Q04493	163 aa		4.56	□□□□□ -1.68
CUP2	YGL166W	CUP2	P15315	225 aa		4.55	□□□□□ -1.68
CUP2	YGL166W	LAC1	P28496	418 aa		4.55	□□□□□ -1.68
CUP2	YGL166W	YHR140W	P38842	239 aa		4.55	□□□□□ -1.68
CUP2	YGL166W	SPC1	P46965	94 aa		4.55	□□□□□ -1.68
CUP2	YGL166W	THG1	P53215	237 aa	Known RBP	4.55	□□□□□ -1.68
CUP2	YGL166W	DGA1	Q08650	418 aa		4.55	□□□□□ -1.68
CUP2	YGL166W	TY1A-DR4	O74302	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-A	P0CX57	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-PR1	P0CX58	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-OR	P0CX59	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-PR2	P0CX60	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-DR5	P0CX65	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-ER2	P0CX66	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-GR3	P0CX67	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-LR1	P0CX68	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-MR2	P0CX69	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	FRS1	P15624	595 aa	Known RBP	4.54	□□□□□ -1.68
CUP2	YGL166W	YGL010W	P25338	174 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	YCR023C	P25351	611 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	NTF2	P33331	125 aa	Known RBP	4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-JR2	P47099	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	MOG1	P47123	218 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-DR1	Q03856	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-ML1	Q04706	440 aa	Known RBP	4.54	□□□□□ -1.68
CUP2	YGL166W	TY1A-GR2	Q12485	440 aa		4.54	□□□□□ -1.68
CUP2	YGL166W	RPL11A	P0C0W9	174 aa	Known RBP	4.53	□□□□□ -1.68
CUP2	YGL166W	KTI12	P34253	313 aa	Known RBP	4.53	□□□□□ -1.68
CUP2	YGL166W	MRPS9	P38120	278 aa		4.53	□□□□□ -1.68
CUP2	YGL166W	POP7	P38291	140 aa		4.53	□□□□□ -1.68
CUP2	YGL166W	TEM1	P38987	245 aa		4.53	□□□□□ -1.68
CUP2	YGL166W	GPI19	Q04082	140 aa		4.53	□□□□□ -1.68
CUP2	YGL166W	PBA1	Q05778	276 aa		4.53	□□□□□ -1.68
CUP2	YGL166W	RPL11B	Q3E757	174 aa	Predicted RBP	4.53	□□□□□ -1.68
CUP2	YGL166W	RPL27A	P0C2H6	136 aa	Known RBP	4.52	□□□□□ -1.69
CUP2	YGL166W	ANB1	P19211	157 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms