RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	SWT21	P53873	357 aa	Predicted RBP	4.81	□□□□□ -1.64
RPT3	YDR394W	TIM10	P87108	93 aa		4.81	□□□□□ -1.64
RPT3	YDR394W	CSI2	Q08054	341 aa		4.81	□□□□□ -1.64
RPT3	YDR394W	TMC1	Q08422	150 aa	Predicted RBP	4.81	□□□□□ -1.64
RPT3	YDR394W	TIM18	Q08749	192 aa		4.81	□□□□□ -1.64
RPT3	YDR394W	FCY1	Q12178	158 aa		4.81	□□□□□ -1.64
RPT3	YDR394W	DAD1	Q12248	94 aa		4.81	□□□□□ -1.64
RPT3	YDR394W	RDL1	Q12305	139 aa	Known RBP	4.81	□□□□□ -1.64
RPT3	YDR394W	SEC4	P07560	215 aa	Known RBP	4.8	□□□□□ -1.64
RPT3	YDR394W	MDM10	P18409	493 aa		4.8	□□□□□ -1.64
RPT3	YDR394W	MBB1	P39534	108 aa		4.8	□□□□□ -1.64
RPT3	YDR394W	YER134C	P40081	178 aa		4.8	□□□□□ -1.64
RPT3	YDR394W	POR2	P40478	281 aa		4.8	□□□□□ -1.64
RPT3	YDR394W	AIM24	P47127	394 aa		4.8	□□□□□ -1.64
RPT3	YDR394W	DAD4	P69851	72 aa		4.8	□□□□□ -1.64
RPT3	YDR394W	UBC7	Q02159	165 aa		4.8	□□□□□ -1.64
RPT3	YDR394W	PBP4	Q07362	185 aa	Known RBP	4.8	□□□□□ -1.64
RPT3	YDR394W	VMA16	P23968	213 aa		4.79	□□□□□ -1.64
RPT3	YDR394W	YPS1	P32329	569 aa		4.79	□□□□□ -1.64
RPT3	YDR394W	GSP1	P32835	219 aa	Known RBP	4.79	□□□□□ -1.64
RPT3	YDR394W	GSP2	P32836	220 aa	Known RBP	4.79	□□□□□ -1.64
RPT3	YDR394W	SEC72	P39742	193 aa	Known RBP	4.79	□□□□□ -1.64
RPT3	YDR394W	PRE5	P40302	234 aa	Known RBP	4.79	□□□□□ -1.64
RPT3	YDR394W	YIL012W	P40551	113 aa		4.79	□□□□□ -1.64
RPT3	YDR394W	YGR219W	P53307	113 aa		4.79	□□□□□ -1.64
RPT3	YDR394W	UPS3	Q04006	179 aa		4.79	□□□□□ -1.64
RPT3	YDR394W	CSM4	Q08955	156 aa		4.79	□□□□□ -1.64
RPT3	YDR394W	YLR342W-A	Q3E810	57 aa		4.79	□□□□□ -1.64
RPT3	YDR394W	RPL23A	P0CX41	137 aa	Known RBP	4.78	□□□□□ -1.64
RPT3	YDR394W	RPL23B	P0CX42	137 aa	Known RBP	4.78	□□□□□ -1.64
RPT3	YDR394W	RPL12A	P0CX53	165 aa	Known RBP	4.78	□□□□□ -1.64
RPT3	YDR394W	RPL12B	P0CX54	165 aa		4.78	□□□□□ -1.64
RPT3	YDR394W	FEN2	P25621	512 aa	Known RBP	4.78	□□□□□ -1.64
RPT3	YDR394W	GLE2	P40066	365 aa		4.78	□□□□□ -1.64
RPT3	YDR394W	HUA1	P40325	198 aa		4.78	□□□□□ -1.64
RPT3	YDR394W	SDS23	P53172	527 aa		4.78	□□□□□ -1.64
RPT3	YDR394W	YNL092W	P53934	400 aa		4.78	□□□□□ -1.64
RPT3	YDR394W	SAE3	P89114	91 aa		4.78	□□□□□ -1.64
RPT3	YDR394W	ARC18	Q05933	178 aa	Known RBP	4.78	□□□□□ -1.64
RPT3	YDR394W	IRC23	Q08416	157 aa		4.78	□□□□□ -1.64
RPT3	YDR394W	FSF1	Q12029	327 aa	Known RBP	4.78	□□□□□ -1.64
RPT3	YDR394W	TPT1	Q12272	230 aa	Known RBP	4.78	□□□□□ -1.64
RPT3	YDR394W	TOR1	P35169	2470 aa		4.77	□□□□□ -1.65
RPT3	YDR394W	VMA11	P32842	164 aa		4.77	□□□□□ -1.65
RPT3	YDR394W	PRS4	P38063	326 aa	Predicted RBP	4.77	□□□□□ -1.65
RPT3	YDR394W	MIC12	P38341	106 aa		4.77	□□□□□ -1.65
RPT3	YDR394W	YMR141C	P40211	102 aa		4.77	□□□□□ -1.65
RPT3	YDR394W	YJL028W	P47062	111 aa		4.77	□□□□□ -1.65
RPT3	YDR394W	COX16	P47081	118 aa		4.77	□□□□□ -1.65
RPT3	YDR394W	BRP1	P53194	125 aa		4.77	□□□□□ -1.65
RPT3	YDR394W	WIP1	Q2V2P8	89 aa		4.77	□□□□□ -1.65
RPT3	YDR394W	CPT1	P17898	393 aa		4.76	□□□□□ -1.65
RPT3	YDR394W	YCR007C	P25354	239 aa		4.76	□□□□□ -1.65
RPT3	YDR394W	THG1	P53215	237 aa	Known RBP	4.76	□□□□□ -1.65
RPT3	YDR394W	GTO3	Q04806	366 aa		4.76	□□□□□ -1.65
RPT3	YDR394W	YMR317W	Q04893	1140 aa		4.76	□□□□□ -1.65
RPT3	YDR394W	HTL1	Q9URQ5	78 aa		4.76	□□□□□ -1.65
RPT3	YDR394W	MEC1	P38111	2368 aa		4.76	□□□□□ -1.65
RPT3	YDR394W	RPL27A	P0C2H6	136 aa	Known RBP	4.75	□□□□□ -1.65
RPT3	YDR394W	YFL068W	P0CX99	160 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	YLL066W-A	P0CY00	160 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	YLL067W-A	P0CY01	160 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	SNF11	P38956	169 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	YNL194C	P40169	301 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	GLC8	P41818	229 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	YPI1	P43587	155 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	GEP3	Q08622	556 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	NAT5	Q08689	176 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	YPL162C	Q12042	273 aa		4.75	□□□□□ -1.65
RPT3	YDR394W	YLR050C	Q12155	161 aa	Known RBP	4.75	□□□□□ -1.65
RPT3	YDR394W	RPL31A	P0C2H8	113 aa	Known RBP	4.74	□□□□□ -1.65
RPT3	YDR394W	CDC43	P18898	376 aa		4.74	□□□□□ -1.65
RPT3	YDR394W	SNU13	P39990	126 aa	Known RBP	4.74	□□□□□ -1.65
RPT3	YDR394W	YNL200C	P40165	246 aa	Known RBP	4.74	□□□□□ -1.65
RPT3	YDR394W	WWM1	P43582	211 aa	Known RBP	4.74	□□□□□ -1.65
RPT3	YDR394W	CAB4	P53332	305 aa		4.74	□□□□□ -1.65
RPT3	YDR394W	GPI19	Q04082	140 aa		4.74	□□□□□ -1.65
RPT3	YDR394W	PAU23	Q07987	124 aa		4.74	□□□□□ -1.65
RPT3	YDR394W	YOL160W	Q08321	113 aa		4.74	□□□□□ -1.65
RPT3	YDR394W	YDL157C	Q12082	118 aa		4.74	□□□□□ -1.65
RPT3	YDR394W	PAU17	Q12370	124 aa		4.74	□□□□□ -1.65
RPT3	YDR394W	Q0297	Q9ZZV8	51 aa		4.74	□□□□□ -1.65
RPT3	YDR394W	INO2	P26798	304 aa		4.73	□□□□□ -1.65
RPT3	YDR394W	CMC1	P36064	111 aa		4.73	□□□□□ -1.65
RPT3	YDR394W	FYV4	P38783	130 aa	Predicted RBP	4.73	□□□□□ -1.65
RPT3	YDR394W	SPI1	P40092	148 aa		4.73	□□□□□ -1.65
RPT3	YDR394W	HAC1	P41546	238 aa		4.73	□□□□□ -1.65
RPT3	YDR394W	YGL230C	P53074	147 aa		4.73	□□□□□ -1.65
RPT3	YDR394W	MHR1	Q06630	226 aa		4.73	□□□□□ -1.65
RPT3	YDR394W	SEC11	P15367	167 aa		4.72	□□□□□ -1.65
RPT3	YDR394W	YHR140W	P38842	239 aa		4.72	□□□□□ -1.65
RPT3	YDR394W	YJR096W	P47137	282 aa		4.72	□□□□□ -1.65
RPT3	YDR394W	POP3	P53833	195 aa	Predicted RBP	4.72	□□□□□ -1.65
RPT3	YDR394W	PKR1	Q03880	122 aa	Known RBP	4.72	□□□□□ -1.65
RPT3	YDR394W	DPP1	Q05521	289 aa		4.72	□□□□□ -1.65
RPT3	YDR394W	TIM22	Q12328	207 aa		4.72	□□□□□ -1.65
RPT3	YDR394W	HAP3	P13434	144 aa		4.71	□□□□□ -1.66
RPT3	YDR394W	YER188W	P40103	239 aa		4.71	□□□□□ -1.66
RPT3	YDR394W	MSL1	P40567	111 aa	Predicted RBP	4.71	□□□□□ -1.66
RPT3	YDR394W	MST27	P53176	234 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms