RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	YMR082C	Q04276	118 aa		2.63	□□□□□ -1.99
HIM1	YDR317W	YMR316C-A	I2HB70	103 aa		2.62	□□□□□ -1.99
HIM1	YDR317W	GCN3	P14741	305 aa		2.62	□□□□□ -1.99
HIM1	YDR317W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
HIM1	YDR317W	PET100	P38958	111 aa		2.62	□□□□□ -1.99
HIM1	YDR317W	YEA4	P40004	342 aa		2.62	□□□□□ -1.99
HIM1	YDR317W	YJR111C	P47148	283 aa	Known RBP	2.62	□□□□□ -1.99
HIM1	YDR317W	TDA4	P47153	279 aa		2.62	□□□□□ -1.99
HIM1	YDR317W	SHH3	Q04487	196 aa		2.62	□□□□□ -1.99
HIM1	YDR317W	ATG39	Q06159	398 aa		2.62	□□□□□ -1.99
HIM1	YDR317W	YPL162C	Q12042	273 aa		2.62	□□□□□ -1.99
HIM1	YDR317W	YDR157W	A0A023PZE8	133 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	CKS1	P20486	150 aa	Known RBP	2.61	□□□□□ -1.99
HIM1	YDR317W	QCR9	P22289	66 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	AIM29	P36154	155 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	SFT2	P38166	215 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	PET8	P38921	284 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	GPI2	P46961	280 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	SNX4	P47057	423 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	YJL027C	P47063	138 aa	Predicted RBP	2.61	□□□□□ -1.99
HIM1	YDR317W	MRPL50	P53724	139 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	MRPS17	Q03246	237 aa	Predicted RBP	2.61	□□□□□ -1.99
HIM1	YDR317W	ATC1	Q04005	294 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	ANT1	Q06497	328 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	PRR2	Q12310	699 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	YOR011W-A	Q3E807	68 aa		2.61	□□□□□ -1.99
HIM1	YDR317W	UBI4	P0CG63	381 aa	Known RBP	2.6	□□□□□ -1.99
HIM1	YDR317W	YHR213W	P0CI67	198 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	HSP12	P22943	109 aa	Known RBP	2.6	□□□□□ -1.99
HIM1	YDR317W	SPO13	P23624	291 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	YCR025C	P25352	136 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	SHB17	P36136	271 aa	Known RBP	2.6	□□□□□ -1.99
HIM1	YDR317W	DER1	P38307	211 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	YBR292C	P38357	123 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	YGR269W	P40326	108 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	TAD2	P47058	250 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	MCM22	P47167	239 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	RIB4	P50861	169 aa	Predicted RBP	2.6	□□□□□ -1.99
HIM1	YDR317W	JAC1	P53193	184 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	YIP3	P53633	176 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	COX12	Q01519	83 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	YML108W	Q03759	105 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	CTR3	Q06686	241 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	YPR013C	Q12145	317 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	YGL194C-A	Q2V2P6	80 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	TAR1	Q8TGM6	124 aa		2.6	□□□□□ -1.99
HIM1	YDR317W	RPL16B	P26785	198 aa	Known RBP	2.59	□□□□□ -1.99
HIM1	YDR317W	VMA22	P38784	181 aa		2.59	□□□□□ -1.99
HIM1	YDR317W	GCV3	P39726	170 aa	Predicted RBP	2.59	□□□□□ -1.99
HIM1	YDR317W	MIC26	P50087	233 aa		2.59	□□□□□ -1.99
HIM1	YDR317W	YGL088W	P53151	121 aa		2.59	□□□□□ -1.99
HIM1	YDR317W	YMR007W	Q03675	126 aa		2.59	□□□□□ -1.99
HIM1	YDR317W	COA4	Q05809	96 aa		2.59	□□□□□ -1.99
HIM1	YDR317W	LOA1	Q06508	300 aa		2.59	□□□□□ -1.99
HIM1	YDR317W	YPR145C-A	Q2V2P0	78 aa		2.59	□□□□□ -1.99
HIM1	YDR317W	DDI2	P0CH63	225 aa		2.58	□□□□□ -2
HIM1	YDR317W	DDI3	P0CH64	225 aa		2.58	□□□□□ -2
HIM1	YDR317W	SRL3	P36167	246 aa		2.58	□□□□□ -2
HIM1	YDR317W	LSM2	P38203	95 aa	Known RBP	2.58	□□□□□ -2
HIM1	YDR317W	SHG1	P38337	142 aa		2.58	□□□□□ -2
HIM1	YDR317W	EMC5	P40540	141 aa		2.58	□□□□□ -2
HIM1	YDR317W	YFR045W	P43617	309 aa		2.58	□□□□□ -2
HIM1	YDR317W	IMP2	P46972	177 aa		2.58	□□□□□ -2
HIM1	YDR317W	GTO3	Q04806	366 aa		2.58	□□□□□ -2
HIM1	YDR317W	DXO1	Q06349	442 aa		2.58	□□□□□ -2
HIM1	YDR317W	YOR015W	Q12169	119 aa		2.58	□□□□□ -2
HIM1	YDR317W	YNL146C-A	Q3E7Z1	64 aa		2.58	□□□□□ -2
HIM1	YDR317W	RPB3	P16370	318 aa	Known RBP	2.57	□□□□□ -2
HIM1	YDR317W	AHT1	P29589	182 aa		2.57	□□□□□ -2
HIM1	YDR317W	AUA1	P32450	94 aa		2.57	□□□□□ -2
HIM1	YDR317W	EMP24	P32803	203 aa	Known RBP	2.57	□□□□□ -2
HIM1	YDR317W	NRG2	P38082	220 aa		2.57	□□□□□ -2
HIM1	YDR317W	YER135C	P40082	130 aa		2.57	□□□□□ -2
HIM1	YDR317W	SMD3	P43321	101 aa	Known RBP	2.57	□□□□□ -2
HIM1	YDR317W	YFR035C	P43608	114 aa		2.57	□□□□□ -2
HIM1	YDR317W	YCL001W-A	P87012	153 aa		2.57	□□□□□ -2
HIM1	YDR317W	AVO2	Q04749	426 aa		2.57	□□□□□ -2
HIM1	YDR317W	YOL160W	Q08321	113 aa		2.57	□□□□□ -2
HIM1	YDR317W	SME1	Q12330	94 aa	Predicted RBP	2.57	□□□□□ -2
HIM1	YDR317W	LSO2	Q3E772	92 aa	Known RBP	2.57	□□□□□ -2
HIM1	YDR317W	MRS1	P07266	363 aa		2.56	□□□□□ -2
HIM1	YDR317W	SPC25	P40014	221 aa		2.56	□□□□□ -2
HIM1	YDR317W	GLE2	P40066	365 aa		2.56	□□□□□ -2
HIM1	YDR317W	DSK2	P48510	373 aa		2.56	□□□□□ -2
HIM1	YDR317W	SGF11	Q03067	99 aa		2.56	□□□□□ -2
HIM1	YDR317W	MRPS8	Q03799	155 aa		2.56	□□□□□ -2
HIM1	YDR317W	FIT2	Q08906	153 aa		2.56	□□□□□ -2
HIM1	YDR317W	YCR075W-A	Q3E830	75 aa		2.56	□□□□□ -2
HIM1	YDR317W	RPL2A	P0CX45	254 aa	Known RBP	2.55	□□□□□ -2
HIM1	YDR317W	RPL2B	P0CX46	254 aa	Known RBP	2.55	□□□□□ -2
HIM1	YDR317W	RPS11A	P0CX47	156 aa	Known RBP	2.55	□□□□□ -2
HIM1	YDR317W	RPS11B	P0CX48	156 aa	Known RBP	2.55	□□□□□ -2
HIM1	YDR317W	RPL14A	P36105	138 aa	Known RBP	2.55	□□□□□ -2
HIM1	YDR317W	YKR032W	P36127	104 aa		2.55	□□□□□ -2
HIM1	YDR317W	TRS20	P38334	175 aa		2.55	□□□□□ -2
HIM1	YDR317W	RPL14B	P38754	138 aa	Known RBP	2.55	□□□□□ -2
HIM1	YDR317W	YHR173C	P38864	112 aa		2.55	□□□□□ -2
HIM1	YDR317W	YGR025W	P53216	100 aa		2.55	□□□□□ -2
HIM1	YDR317W	PAU4	P53427	120 aa		2.55	□□□□□ -2
HIM1	YDR317W	TMA23	Q03525	211 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms