RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YPR010C-AA5Z2X5 72 aa1.53□□□□□ -2.16
SIR4YDR227W YCR099CP25657 155 aa1.53□□□□□ -2.16
SIR4YDR227W ZRT3P34240 503 aa1.53□□□□□ -2.16
SIR4YDR227W LSM12P38828 187 aaKnown RBP1.53□□□□□ -2.16
SIR4YDR227W SLM2P53955 656 aa1.53□□□□□ -2.16
SIR4YDR227W OSW1Q08692 278 aa1.53□□□□□ -2.16
SIR4YDR227W YOR292CQ08743 309 aa1.53□□□□□ -2.16
SIR4YDR227W YBR013CP38215 129 aa1.53□□□□□ -2.17
SIR4YDR227W NSA2P40078 261 aaKnown RBP1.53□□□□□ -2.17
SIR4YDR227W YIL024CP40543 189 aa1.53□□□□□ -2.17
SIR4YDR227W RPA43P46669 326 aa1.53□□□□□ -2.17
SIR4YDR227W YHR032W-AP0C5N6 59 aa1.52□□□□□ -2.17
SIR4YDR227W IPT1P38954 527 aa1.52□□□□□ -2.17
SIR4YDR227W YCL001W-AP87012 153 aa1.52□□□□□ -2.17
SIR4YDR227W CSN9Q03981 162 aa1.52□□□□□ -2.17
SIR4YDR227W RRT7Q07829 113 aa1.52□□□□□ -2.17
SIR4YDR227W YPL245WQ12179 454 aaKnown RBP1.52□□□□□ -2.17
SIR4YDR227W YAR023CD6VPM8 179 aa1.52□□□□□ -2.17
SIR4YDR227W ADH1P00330 348 aaKnown RBP1.52□□□□□ -2.17
SIR4YDR227W YLR156WP0CE96 114 aa1.52□□□□□ -2.17
SIR4YDR227W YLR159WP0CE97 114 aa1.52□□□□□ -2.17
SIR4YDR227W YLR161WP0CE98 114 aa1.52□□□□□ -2.17
SIR4YDR227W RPF1P38805 295 aaKnown RBP1.52□□□□□ -2.17
SIR4YDR227W YEL028WP39989 153 aa1.52□□□□□ -2.17
SIR4YDR227W HPT1Q04178 221 aaKnown RBP1.52□□□□□ -2.17
SIR4YDR227W FCF1Q05498 189 aaPredicted RBP1.52□□□□□ -2.17
SIR4YDR227W YBR056W-AI2HB52 66 aa1.52□□□□□ -2.17
SIR4YDR227W TMA19P35691 167 aaKnown RBP1.52□□□□□ -2.17
SIR4YDR227W URM1P40554 99 aaPredicted RBP1.52□□□□□ -2.17
SIR4YDR227W PIR5P46999 287 aa1.52□□□□□ -2.17
SIR4YDR227W DSK2P48510 373 aa1.52□□□□□ -2.17
SIR4YDR227W YGR039WP53225 103 aa1.52□□□□□ -2.17
SIR4YDR227W MIM1Q08176 113 aa1.52□□□□□ -2.17
SIR4YDR227W YLR099W-AQ3E798 87 aa1.52□□□□□ -2.17
SIR4YDR227W YHR213W-AQ8TGT4 77 aa1.52□□□□□ -2.17
SIR4YDR227W YOR304C-AO14468 76 aa1.51□□□□□ -2.17
SIR4YDR227W ATP5P09457 212 aa1.51□□□□□ -2.17
SIR4YDR227W UGX2P32772 223 aa1.51□□□□□ -2.17
SIR4YDR227W IGD1P43598 195 aa1.51□□□□□ -2.17
SIR4YDR227W YJR085CP47131 105 aaKnown RBP1.51□□□□□ -2.17
SIR4YDR227W RSM19P53733 91 aaPredicted RBP1.51□□□□□ -2.17
SIR4YDR227W MIX17Q03667 156 aa1.51□□□□□ -2.17
SIR4YDR227W YNL162W-AQ3E7A8 72 aa1.51□□□□□ -2.17
SIR4YDR227W VAR1P02381 398 aa1.51□□□□□ -2.17
SIR4YDR227W MRS4P23500 304 aa1.51□□□□□ -2.17
SIR4YDR227W ARP3P47117 449 aaKnown RBP1.51□□□□□ -2.17
SIR4YDR227W RBL2P48606 106 aaKnown RBP1.51□□□□□ -2.17
SIR4YDR227W IDP3P53982 420 aaKnown RBP1.51□□□□□ -2.17
SIR4YDR227W YMR295CQ03559 197 aa1.51□□□□□ -2.17
SIR4YDR227W KSH1Q8TGJ3 72 aa1.51□□□□□ -2.17
SIR4YDR227W BET1P22804 142 aa1.51□□□□□ -2.17
SIR4YDR227W ERV15P38312 142 aa1.51□□□□□ -2.17
SIR4YDR227W SPC1P46965 94 aa1.51□□□□□ -2.17
SIR4YDR227W SIP18P50263 79 aa1.51□□□□□ -2.17
SIR4YDR227W TOS8P53147 276 aa1.51□□□□□ -2.17
SIR4YDR227W SDS23P53172 527 aa1.51□□□□□ -2.17
SIR4YDR227W RPN13O13563 156 aa1.5□□□□□ -2.17
SIR4YDR227W YEL067CP39978 195 aa1.5□□□□□ -2.17
SIR4YDR227W SYS1P41544 203 aa1.5□□□□□ -2.17
SIR4YDR227W MCP1Q12106 302 aa1.5□□□□□ -2.17
SIR4YDR227W SWM2P40342 146 aa1.5□□□□□ -2.17
SIR4YDR227W PHS1P40857 217 aa1.5□□□□□ -2.17
SIR4YDR227W WIP1Q2V2P8 89 aa1.5□□□□□ -2.17
SIR4YDR227W YKR045CP36138 183 aa1.5□□□□□ -2.17
SIR4YDR227W SNF11P38956 169 aa1.5□□□□□ -2.17
SIR4YDR227W TEM1P38987 245 aa1.5□□□□□ -2.17
SIR4YDR227W DIE2P50076 525 aa1.5□□□□□ -2.17
SIR4YDR227W ELC1Q03071 99 aa1.5□□□□□ -2.17
SIR4YDR227W YMR090WQ04304 227 aaKnown RBP1.5□□□□□ -2.17
SIR4YDR227W YOR186WQ08560 144 aa1.5□□□□□ -2.17
SIR4YDR227W YHR139C-AO13536 103 aa1.5□□□□□ -2.17
SIR4YDR227W RPB3P16370 318 aaKnown RBP1.5□□□□□ -2.17
SIR4YDR227W CLB6P32943 380 aa1.5□□□□□ -2.17
SIR4YDR227W AVT6P40074 448 aa1.5□□□□□ -2.17
SIR4YDR227W RPL9BP51401 191 aaKnown RBP1.5□□□□□ -2.17
SIR4YDR227W RAD28Q12021 506 aa1.5□□□□□ -2.17
SIR4YDR227W EMP24P32803 203 aaKnown RBP1.49□□□□□ -2.17
SIR4YDR227W CRC1Q12289 327 aa1.49□□□□□ -2.17
SIR4YDR227W YOS1Q3E834 85 aa1.49□□□□□ -2.17
SIR4YDR227W IRC22P40006 225 aa1.49□□□□□ -2.17
SIR4YDR227W RPS29BP41058 56 aaKnown RBP1.49□□□□□ -2.17
SIR4YDR227W YMR320WQ04897 101 aa1.49□□□□□ -2.17
SIR4YDR227W CDC7P06243 507 aa1.49□□□□□ -2.17
SIR4YDR227W YKR032WP36127 104 aa1.49□□□□□ -2.17
SIR4YDR227W NSE4P43124 402 aa1.49□□□□□ -2.17
SIR4YDR227W TSA2Q04120 196 aa1.49□□□□□ -2.17
SIR4YDR227W SNO3P43544 222 aa1.48□□□□□ -2.17
SIR4YDR227W ADD37Q03233 198 aa1.48□□□□□ -2.17
SIR4YDR227W RPL13AQ12690 199 aaPredicted RBP1.48□□□□□ -2.17
SIR4YDR227W SPO13P23624 291 aa1.48□□□□□ -2.17
SIR4YDR227W FZF1P32805 299 aa1.48□□□□□ -2.17
SIR4YDR227W YPR195CQ06594 109 aa1.48□□□□□ -2.17
SIR4YDR227W YIL054WP40524 105 aa1.48□□□□□ -2.17
SIR4YDR227W LCL1Q02786 101 aa1.48□□□□□ -2.17
SIR4YDR227W LIP1Q03579 150 aa1.48□□□□□ -2.17
SIR4YDR227W SYC1Q08553 188 aaPredicted RBP1.48□□□□□ -2.17
SIR4YDR227W FCF2Q12035 217 aaPredicted RBP1.48□□□□□ -2.17
SIR4YDR227W RAS2P01120 322 aaKnown RBP1.47□□□□□ -2.17
SIR4YDR227W YET1P35723 206 aa1.47□□□□□ -2.17
SIR4YDR227W KNH1P50112 268 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms