RNA–Protein interactions for RNA: YDR178W

SDH4, Transcript of Membrane anchor subunit of succinate dehydrogenase (SDH), yeast

Gene SDH4, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH4	YDR178W	ADH3	P07246	375 aa	Known RBP	4.69	□□□□□ -1.66
SDH4	YDR178W	RPL31B	P0C2H9	113 aa	Known RBP	4.69	□□□□□ -1.66
SDH4	YDR178W	TIR1	P10863	254 aa		4.69	□□□□□ -1.66
SDH4	YDR178W	MRPL4	P36517	319 aa		4.69	□□□□□ -1.66
SDH4	YDR178W	NRG2	P38082	220 aa		4.69	□□□□□ -1.66
SDH4	YDR178W	VMA21	P41806	77 aa		4.69	□□□□□ -1.66
SDH4	YDR178W	DAD3	P69850	94 aa		4.69	□□□□□ -1.66
SDH4	YDR178W	DAD4	P69851	72 aa		4.69	□□□□□ -1.66
SDH4	YDR178W	YML108W	Q03759	105 aa		4.69	□□□□□ -1.66
SDH4	YDR178W	YLR281C	Q05863	155 aa		4.69	□□□□□ -1.66
SDH4	YDR178W	POF1	P25576	258 aa		4.68	□□□□□ -1.66
SDH4	YDR178W	PGD1	P40356	397 aa		4.68	□□□□□ -1.66
SDH4	YDR178W	DAN1	P47178	298 aa		4.68	□□□□□ -1.66
SDH4	YDR178W	YGL185C	P53100	379 aa		4.68	□□□□□ -1.66
SDH4	YDR178W	YPL162C	Q12042	273 aa		4.68	□□□□□ -1.66
SDH4	YDR178W	YLR342W-A	Q3E810	57 aa		4.68	□□□□□ -1.66
SDH4	YDR178W	CPT1	P17898	393 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	MLF3	P32047	452 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	QRI5	P32344	111 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	GET2	P40056	285 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	YFR045W	P43617	309 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	YDL183C	P48569	320 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	HHO1	P53551	258 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	YPR063C	Q12160	140 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	SMT3	Q12306	101 aa	Known RBP	4.67	□□□□□ -1.66
SDH4	YDR178W	DCN1	Q12395	269 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	YCL001W-B	Q96VH2	84 aa		4.67	□□□□□ -1.66
SDH4	YDR178W	NHP6A	P11632	93 aa	Known RBP	4.66	□□□□□ -1.66
SDH4	YDR178W	PAU15	P40585	124 aa		4.66	□□□□□ -1.66
SDH4	YDR178W	YJR096W	P47137	282 aa		4.66	□□□□□ -1.66
SDH4	YDR178W	COX12	Q01519	83 aa		4.66	□□□□□ -1.66
SDH4	YDR178W	YOR105W	Q08504	108 aa		4.66	□□□□□ -1.66
SDH4	YDR178W	DAD1	Q12248	94 aa		4.66	□□□□□ -1.66
SDH4	YDR178W	YOP1	Q12402	180 aa		4.66	□□□□□ -1.66
SDH4	YDR178W	VAR1	P02381	398 aa		4.65	□□□□□ -1.67
SDH4	YDR178W	MRPL31	P14063	131 aa	Predicted RBP	4.65	□□□□□ -1.67
SDH4	YDR178W	MIX23	P38162	196 aa		4.65	□□□□□ -1.67
SDH4	YDR178W	YBR013C	P38215	129 aa		4.65	□□□□□ -1.67
SDH4	YDR178W	HSP10	P38910	106 aa		4.65	□□□□□ -1.67
SDH4	YDR178W	MGA1	P53050	456 aa		4.65	□□□□□ -1.67
SDH4	YDR178W	CUP2	P15315	225 aa		4.64	□□□□□ -1.67
SDH4	YDR178W	VMA16	P23968	213 aa		4.64	□□□□□ -1.67
SDH4	YDR178W	YGL010W	P25338	174 aa		4.64	□□□□□ -1.67
SDH4	YDR178W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SDH4	YDR178W	PAM17	P36147	197 aa		4.64	□□□□□ -1.67
SDH4	YDR178W	NSE4	P43124	402 aa		4.64	□□□□□ -1.67
SDH4	YDR178W	MOG1	P47123	218 aa		4.64	□□□□□ -1.67
SDH4	YDR178W	GIM5	Q04493	163 aa		4.64	□□□□□ -1.67
SDH4	YDR178W	UTP23	Q12339	254 aa	Known RBP	4.64	□□□□□ -1.67
SDH4	YDR178W	MDN1	Q12019	4910 aa	Known RBP	4.64	□□□□□ -1.67
SDH4	YDR178W	CYC7	P00045	113 aa		4.63	□□□□□ -1.67
SDH4	YDR178W	RPS11A	P0CX47	156 aa	Known RBP	4.63	□□□□□ -1.67
SDH4	YDR178W	RPS11B	P0CX48	156 aa	Known RBP	4.63	□□□□□ -1.67
SDH4	YDR178W	AGA1	P32323	725 aa		4.63	□□□□□ -1.67
SDH4	YDR178W	DUO1	P53168	247 aa	Known RBP	4.63	□□□□□ -1.67
SDH4	YDR178W	SCW10	Q04951	389 aa		4.63	□□□□□ -1.67
SDH4	YDR178W	RDS3	Q06835	107 aa	Predicted RBP	4.63	□□□□□ -1.67
SDH4	YDR178W	YDR215C	Q12240	137 aa		4.63	□□□□□ -1.67
SDH4	YDR178W	RPL2A	P0CX45	254 aa	Known RBP	4.62	□□□□□ -1.67
SDH4	YDR178W	RPL2B	P0CX46	254 aa	Known RBP	4.62	□□□□□ -1.67
SDH4	YDR178W	RPB11	P38902	120 aa		4.62	□□□□□ -1.67
SDH4	YDR178W	VHS2	P40463	436 aa		4.62	□□□□□ -1.67
SDH4	YDR178W	PAU5	P43575	122 aa		4.62	□□□□□ -1.67
SDH4	YDR178W	APS2	Q00381	147 aa		4.62	□□□□□ -1.67
SDH4	YDR178W	ARC18	Q05933	178 aa	Known RBP	4.62	□□□□□ -1.67
SDH4	YDR178W	TIM22	Q12328	207 aa		4.62	□□□□□ -1.67
SDH4	YDR178W	SNU23	Q12368	194 aa	Predicted RBP	4.62	□□□□□ -1.67
SDH4	YDR178W	YBR200W-A	Q3E755	54 aa		4.62	□□□□□ -1.67
SDH4	YDR178W	YNR034W-A	Q3E841	98 aa		4.62	□□□□□ -1.67
SDH4	YDR178W	RPL12A	P0CX53	165 aa	Known RBP	4.61	□□□□□ -1.67
SDH4	YDR178W	RPL12B	P0CX54	165 aa		4.61	□□□□□ -1.67
SDH4	YDR178W	HMRA1	P0CY11	126 aa		4.61	□□□□□ -1.67
SDH4	YDR178W	YGR026W	P53217	278 aa		4.61	□□□□□ -1.67
SDH4	YDR178W	UPS3	Q04006	179 aa		4.61	□□□□□ -1.67
SDH4	YDR178W	RPL16B	P26785	198 aa	Known RBP	4.6	□□□□□ -1.67
SDH4	YDR178W	DAD2	P36162	133 aa		4.6	□□□□□ -1.67
SDH4	YDR178W	RRT13	P40042	185 aa		4.6	□□□□□ -1.67
SDH4	YDR178W	ATG33	Q06485	197 aa		4.6	□□□□□ -1.67
SDH4	YDR178W	YCR001W	P25347	104 aa		4.59	□□□□□ -1.67
SDH4	YDR178W	COX16	P47081	118 aa		4.59	□□□□□ -1.67
SDH4	YDR178W	BRP1	P53194	125 aa		4.59	□□□□□ -1.67
SDH4	YDR178W	YGR017W	P53210	297 aa		4.59	□□□□□ -1.67
SDH4	YDR178W	Q0255	P03881	472 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	PAU19	P0CE85	124 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	PAU21	P0CE86	164 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	PAU22	P0CE87	164 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	PAU3	P25610	124 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	SDH8	P38345	138 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	GTT1	P40582	234 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	KEG1	P43614	200 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	YDR366C	P87287	132 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	CSM4	Q08955	156 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	YCR024C-B	Q3E7Z8	88 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	YPR053C	Q6Q5F3	151 aa		4.58	□□□□□ -1.68
SDH4	YDR178W	POR1	P04840	283 aa	Known RBP	4.57	□□□□□ -1.68
SDH4	YDR178W	ZRT1	P32804	376 aa		4.57	□□□□□ -1.68
SDH4	YDR178W	SDS23	P53172	527 aa		4.57	□□□□□ -1.68
SDH4	YDR178W	THG1	P53215	237 aa	Known RBP	4.57	□□□□□ -1.68
SDH4	YDR178W	DIA1	P54005	336 aa		4.57	□□□□□ -1.68
SDH4	YDR178W	GPI19	Q04082	140 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms