RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	SPC3	Q12133	184 aa		0.42	□□□□□ -2.34
SWF1	YDR126W	RIB3	Q99258	208 aa		0.42	□□□□□ -2.34
SWF1	YDR126W	DDP1	Q99321	188 aa	Known RBP	0.42	□□□□□ -2.34
SWF1	YDR126W	YLR422W	Q06409	1932 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	RPL36B	O14455	100 aa	Known RBP	0.41	□□□□□ -2.34
SWF1	YDR126W	RPL36A	P05745	100 aa	Predicted RBP	0.41	□□□□□ -2.34
SWF1	YDR126W	FYV5	P25585	152 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	RME1	P32338	300 aa	Known RBP	0.41	□□□□□ -2.34
SWF1	YDR126W	HSP150	P32478	413 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	GSP1	P32835	219 aa	Known RBP	0.41	□□□□□ -2.34
SWF1	YDR126W	RPS1A	P33442	255 aa	Known RBP	0.41	□□□□□ -2.34
SWF1	YDR126W	SFT2	P38166	215 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	IPT1	P38954	527 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	YJL218W	P40892	196 aa	Known RBP	0.41	□□□□□ -2.34
SWF1	YDR126W	YPL067C	Q02754	198 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	SEN15	Q04675	128 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	YDR278C	Q05612	105 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	SOM1	Q05676	74 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	YLR296W	Q05898	108 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	YNL277W-A	Q3E7Z0	62 aa		0.41	□□□□□ -2.34
SWF1	YDR126W	COX5B	P00425	151 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	YGL014C-A	P0C5N1	53 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	PAU21	P0CE86	164 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	PAU22	P0CE87	164 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	YHR213W	P0CI67	198 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	NMT1	P14743	455 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	UTP11	P34247	250 aa	Predicted RBP	0.4	□□□□□ -2.35
SWF1	YDR126W	PRS3	P38689	320 aa	Known RBP	0.4	□□□□□ -2.35
SWF1	YDR126W	RPS20	P38701	121 aa	Known RBP	0.4	□□□□□ -2.35
SWF1	YDR126W	CYC2	P38909	366 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	VMA7	P39111	118 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	PHS1	P40857	217 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	MVB12	P42939	101 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	SAE3	P89114	91 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	DYN2	Q02647	92 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	MGR2	Q02889	113 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	YMR122C	Q03879	124 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	AVO2	Q04749	426 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	YMR320W	Q04897	101 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	YMR321C	Q04898	105 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	FRQ1	Q06389	190 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	HPA2	Q06592	156 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	FCF2	Q12035	217 aa	Predicted RBP	0.4	□□□□□ -2.35
SWF1	YDR126W	SLO1	Q3E784	85 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	CMC4	Q3E7A9	73 aa		0.4	□□□□□ -2.35
SWF1	YDR126W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.39	□□□□□ -2.35
SWF1	YDR126W	MRPL31	P14063	131 aa	Predicted RBP	0.39	□□□□□ -2.35
SWF1	YDR126W	RPL14A	P36105	138 aa	Known RBP	0.39	□□□□□ -2.35
SWF1	YDR126W	QCR10	P37299	77 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	RPL14B	P38754	138 aa	Known RBP	0.39	□□□□□ -2.35
SWF1	YDR126W	YMR141C	P40211	102 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	HPM1	P40481	377 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	LST8	P41318	303 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	ERV14	P53173	138 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	BRP1	P53194	125 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	AIM11	P87275	137 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	APS2	Q00381	147 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	GPI19	Q04082	140 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	COA4	Q05809	96 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	YOR385W	Q08909	290 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	GTT2	Q12390	233 aa		0.39	□□□□□ -2.35
SWF1	YDR126W	RIF1	P29539	1916 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	ROM2	P51862	1356 aa	Known RBP	0.38	□□□□□ -2.35
SWF1	YDR126W	SEC59	P20048	519 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	YCR050C	P25630	102 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	MRP49	P32388	137 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	HYM1	P32464	399 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	HHY1	P39982	102 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	ICS3	P47034	131 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	TVP18	Q04767	167 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	YGL041C-B	Q3E750	60 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	YLR361C-A	Q3E795	98 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	HSL1	P34244	1518 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	SNT2	P53127	1403 aa		0.38	□□□□□ -2.35
SWF1	YDR126W	MYO2	P19524	1574 aa	Known RBP	0.37	□□□□□ -2.35
SWF1	YDR126W	DUR1,2	P32528	1835 aa	Known RBP	0.37	□□□□□ -2.35
SWF1	YDR126W	YSF3	P0C074	85 aa	Predicted RBP	0.37	□□□□□ -2.35
SWF1	YDR126W	EMP24	P32803	203 aa	Known RBP	0.37	□□□□□ -2.35
SWF1	YDR126W	SRX1	P36077	127 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	RPB11	P38902	120 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	YAL064W	P39711	94 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	POR2	P40478	281 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	VPS55	P47111	140 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	MIC27	P50945	234 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	YIL014C-A	Q02598	104 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	ARL3	Q02804	198 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	SPC24	Q04477	213 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	FIT3	Q08907	204 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	YLR363W-A	Q3E747	85 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	HUG1	Q6Q5K6	68 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	SLH1	P53327	1967 aa	Known RBP	0.37	□□□□□ -2.35
SWF1	YDR126W	RAD50	P12753	1312 aa		0.37	□□□□□ -2.35
SWF1	YDR126W	UBR1	P19812	1950 aa		0.36	□□□□□ -2.35
SWF1	YDR126W	RPL22A	P05749	121 aa	Known RBP	0.36	□□□□□ -2.35
SWF1	YDR126W	RPL40A	P0CH08	128 aa	Known RBP	0.36	□□□□□ -2.35
SWF1	YDR126W	RPL40B	P0CH09	128 aa	Known RBP	0.36	□□□□□ -2.35
SWF1	YDR126W	RPL43A	P0CX25	92 aa	Known RBP	0.36	□□□□□ -2.35
SWF1	YDR126W	RPL43B	P0CX26	92 aa		0.36	□□□□□ -2.35
SWF1	YDR126W	YCR099C	P25657	155 aa		0.36	□□□□□ -2.35
SWF1	YDR126W	ACP1	P32463	125 aa		0.36	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 127.9 ms