RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W URA5P13298 226 aaKnown RBP4.34□□□□□ -1.71
FOB1YDR110W YGL010WP25338 174 aa4.34□□□□□ -1.71
FOB1YDR110W VMA11P32842 164 aa4.34□□□□□ -1.71
FOB1YDR110W YET1P35723 206 aa4.34□□□□□ -1.71
FOB1YDR110W CLD1P53264 445 aa4.34□□□□□ -1.71
FOB1YDR110W SPG3Q04398 127 aaPredicted RBP4.34□□□□□ -1.71
FOB1YDR110W NDD1Q08887 554 aa4.34□□□□□ -1.71
FOB1YDR110W ATG5Q12380 294 aa4.34□□□□□ -1.71
FOB1YDR110W YOS1Q3E834 85 aa4.34□□□□□ -1.71
FOB1YDR110W TRP1P00912 224 aa4.33□□□□□ -1.72
FOB1YDR110W YFR035CP43608 114 aa4.33□□□□□ -1.72
FOB1YDR110W SYM1Q06563 197 aa4.33□□□□□ -1.72
FOB1YDR110W RPS13P05756 151 aaKnown RBP4.32□□□□□ -1.72
FOB1YDR110W UBC4P15731 148 aa4.32□□□□□ -1.72
FOB1YDR110W YAR023CD6VPM8 179 aa4.32□□□□□ -1.72
FOB1YDR110W INO4P13902 151 aa4.32□□□□□ -1.72
FOB1YDR110W MIG1P27705 504 aa4.32□□□□□ -1.72
FOB1YDR110W MRPL11P36521 249 aaPredicted RBP4.32□□□□□ -1.72
FOB1YDR110W YND1P40009 630 aa4.32□□□□□ -1.72
FOB1YDR110W BNS1P50084 137 aa4.32□□□□□ -1.72
FOB1YDR110W MIC10Q96VH5 97 aa4.32□□□□□ -1.72
FOB1YDR110W ECM12O13529 151 aa4.31□□□□□ -1.72
FOB1YDR110W MAK31P23059 88 aa4.31□□□□□ -1.72
FOB1YDR110W TOD6P34219 525 aa4.31□□□□□ -1.72
FOB1YDR110W TIR3P40552 269 aa4.31□□□□□ -1.72
FOB1YDR110W NCA3P46955 337 aa4.31□□□□□ -1.72
FOB1YDR110W YMR244WQ04018 355 aa4.31□□□□□ -1.72
FOB1YDR110W RPL42AP0CX27 106 aaKnown RBP4.3□□□□□ -1.72
FOB1YDR110W RPL42BP0CX28 106 aaKnown RBP4.3□□□□□ -1.72
FOB1YDR110W CWP2P43497 92 aa4.3□□□□□ -1.72
FOB1YDR110W RAF1Q06891 181 aa4.3□□□□□ -1.72
FOB1YDR110W RAS2P01120 322 aaKnown RBP4.29□□□□□ -1.72
FOB1YDR110W FUN14P18411 198 aa4.29□□□□□ -1.72
FOB1YDR110W PHO88P38264 188 aaPredicted RBP4.29□□□□□ -1.72
FOB1YDR110W YFL065CP43539 102 aa4.29□□□□□ -1.72
FOB1YDR110W PIR5P46999 287 aa4.29□□□□□ -1.72
FOB1YDR110W YPR203WQ08994 102 aa4.29□□□□□ -1.72
FOB1YDR110W YPL247CQ12523 523 aa4.29□□□□□ -1.72
FOB1YDR110W YHL042WP38729 150 aa4.29□□□□□ -1.72
FOB1YDR110W YAR068WP39564 161 aa4.29□□□□□ -1.72
FOB1YDR110W SPG1P50088 95 aa4.29□□□□□ -1.72
FOB1YDR110W CSI2Q08054 341 aa4.29□□□□□ -1.72
FOB1YDR110W ATP20Q12233 115 aa4.29□□□□□ -1.72
FOB1YDR110W ECM29P38737 1868 aa4.28□□□□□ -1.72
FOB1YDR110W MDH2P22133 377 aa4.28□□□□□ -1.72
FOB1YDR110W YNL208WP40159 199 aaKnown RBP4.28□□□□□ -1.72
FOB1YDR110W MSL1P40567 111 aaPredicted RBP4.28□□□□□ -1.72
FOB1YDR110W YNR064CP53750 290 aa4.28□□□□□ -1.72
FOB1YDR110W HAL1Q01766 294 aa4.28□□□□□ -1.72
FOB1YDR110W YLR422WQ06409 1932 aa4.28□□□□□ -1.72
FOB1YDR110W EMC5P40540 141 aa4.27□□□□□ -1.73
FOB1YDR110W ATG18P43601 500 aa4.27□□□□□ -1.73
FOB1YDR110W KNH1P50112 268 aa4.27□□□□□ -1.73
FOB1YDR110W CRH1P53301 507 aa4.27□□□□□ -1.73
FOB1YDR110W YDR274CP87283 123 aa4.27□□□□□ -1.73
FOB1YDR110W TAO3P40468 2376 aa4.27□□□□□ -1.73
FOB1YDR110W MYO1P08964 1928 aa4.27□□□□□ -1.73
FOB1YDR110W TIM9O74700 87 aa4.26□□□□□ -1.73
FOB1YDR110W SSS1P35179 80 aa4.26□□□□□ -1.73
FOB1YDR110W RRT7Q07829 113 aa4.26□□□□□ -1.73
FOB1YDR110W RPL21BQ12672 160 aaKnown RBP4.26□□□□□ -1.73
FOB1YDR110W ADH3P07246 375 aaKnown RBP4.26□□□□□ -1.73
FOB1YDR110W CYB5P40312 120 aa4.26□□□□□ -1.73
FOB1YDR110W RIM9Q04734 239 aa4.26□□□□□ -1.73
FOB1YDR110W AYT1Q12226 474 aa4.26□□□□□ -1.73
FOB1YDR110W RRT15Q3E811 62 aa4.26□□□□□ -1.73
FOB1YDR110W SNF11P38956 169 aa4.25□□□□□ -1.73
FOB1YDR110W SNN1P48232 102 aa4.25□□□□□ -1.73
FOB1YDR110W YMR321CQ04898 105 aa4.25□□□□□ -1.73
FOB1YDR110W YOR385WQ08909 290 aa4.25□□□□□ -1.73
FOB1YDR110W SMT3Q12306 101 aaKnown RBP4.25□□□□□ -1.73
FOB1YDR110W YLR365WQ7LIF2 110 aa4.25□□□□□ -1.73
FOB1YDR110W YKL044WP36092 106 aa4.24□□□□□ -1.73
FOB1YDR110W CTR2P38865 189 aa4.24□□□□□ -1.73
FOB1YDR110W FLX1P40464 311 aa4.24□□□□□ -1.73
FOB1YDR110W ODC2Q99297 307 aa4.24□□□□□ -1.73
FOB1YDR110W PAI3P01094 68 aa4.24□□□□□ -1.73
FOB1YDR110W POR1P04840 283 aaKnown RBP4.24□□□□□ -1.73
FOB1YDR110W YEL045CP32616 141 aa4.24□□□□□ -1.73
FOB1YDR110W YKR073CP36153 106 aa4.24□□□□□ -1.73
FOB1YDR110W GPI18P38211 433 aa4.24□□□□□ -1.73
FOB1YDR110W TDA2P40045 126 aa4.24□□□□□ -1.73
FOB1YDR110W DSK2P48510 373 aa4.24□□□□□ -1.73
FOB1YDR110W GPI19Q04082 140 aa4.24□□□□□ -1.73
FOB1YDR110W PRM3Q08931 133 aa4.24□□□□□ -1.73
FOB1YDR110W YOL162WP0CF19 215 aa4.23□□□□□ -1.73
FOB1YDR110W SWD3P38123 315 aa4.23□□□□□ -1.73
FOB1YDR110W RRT1P38192 103 aa4.23□□□□□ -1.73
FOB1YDR110W ARC15P40518 154 aaRIP-Chip data4.23□□□□□ -1.73not detected
FOB1YDR110W RPR2P40571 144 aa4.23□□□□□ -1.73
FOB1YDR110W RPL21AQ02753 160 aaKnown RBP4.23□□□□□ -1.73
FOB1YDR110W LIP1Q03579 150 aa4.23□□□□□ -1.73
FOB1YDR110W SRL1Q08673 210 aa4.23□□□□□ -1.73
FOB1YDR110W POC4Q12245 148 aaPredicted RBP4.23□□□□□ -1.73
FOB1YDR110W TVP23P38962 199 aa4.22□□□□□ -1.73
FOB1YDR110W MRPS8Q03799 155 aa4.22□□□□□ -1.73
FOB1YDR110W COA6Q3E846 104 aa4.22□□□□□ -1.73
FOB1YDR110W SCS22Q6Q595 175 aa4.22□□□□□ -1.73
FOB1YDR110W ATG40Q99325 256 aa4.22□□□□□ -1.73
FOB1YDR110W YCR085WP25650 117 aa4.21□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms