RNA–Protein interactions for RNA: YDR022C

ATG31, Transcript of Autophagy-specific protein required for autophagosome formation, yeastyeast

Gene ATG31, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG31YDR022C PHB1P40961 287 aa-0.34□□□□□ -2.46
ATG31YDR022C YJR128WP47162 119 aa-0.34□□□□□ -2.46
ATG31YDR022C MRPL31P14063 131 aaPredicted RBP-0.35□□□□□ -2.47
ATG31YDR022C SFT2P38166 215 aa-0.35□□□□□ -2.47
ATG31YDR022C YFR035CP43608 114 aa-0.35□□□□□ -2.47
ATG31YDR022C YPL067CQ02754 198 aa-0.35□□□□□ -2.47
ATG31YDR022C GIM5Q04493 163 aa-0.35□□□□□ -2.47
ATG31YDR022C DDP1Q99321 188 aaKnown RBP-0.35□□□□□ -2.47
ATG31YDR022C PFY1P07274 126 aa-0.36□□□□□ -2.47
ATG31YDR022C PBI2P0CT04 75 aaKnown RBP-0.36□□□□□ -2.47
ATG31YDR022C HSP12P22943 109 aaKnown RBP-0.36□□□□□ -2.47
ATG31YDR022C ATG38Q05789 226 aaKnown RBP-0.36□□□□□ -2.47
ATG31YDR022C NAT5Q08689 176 aa-0.36□□□□□ -2.47
ATG31YDR022C BUB2P26448 306 aaPredicted RBP-0.37□□□□□ -2.47
ATG31YDR022C VPS51P36116 164 aa-0.37□□□□□ -2.47
ATG31YDR022C BRP1P53194 125 aa-0.37□□□□□ -2.47
ATG31YDR022C YLR296WQ05898 108 aa-0.37□□□□□ -2.47
ATG31YDR022C RAF1Q06891 181 aa-0.37□□□□□ -2.47
ATG31YDR022C YOR385WQ08909 290 aa-0.37□□□□□ -2.47
ATG31YDR022C POL2P21951 2222 aaKnown RBP-0.38□□□□□ -2.47
ATG31YDR022C RTC6O14464 93 aa-0.38□□□□□ -2.47
ATG31YDR022C RPS28BP0C0X0 67 aaKnown RBP-0.38□□□□□ -2.47
ATG31YDR022C FIG1P38224 298 aa-0.38□□□□□ -2.47
ATG31YDR022C YDR010CQ12426 110 aa-0.38□□□□□ -2.47
ATG31YDR022C EFG1Q3E705 233 aaKnown RBP-0.38□□□□□ -2.47
ATG31YDR022C RPS28AQ3E7X9 67 aaPredicted RBP-0.38□□□□□ -2.47
ATG31YDR022C QCR2P07257 368 aa-0.39□□□□□ -2.47
ATG31YDR022C EMP24P32803 203 aaKnown RBP-0.39□□□□□ -2.47
ATG31YDR022C MRPL11P36521 249 aaPredicted RBP-0.39□□□□□ -2.47
ATG31YDR022C YGR201CP42936 225 aa-0.39□□□□□ -2.47
ATG31YDR022C LSM1P47017 172 aaKnown RBP-0.39□□□□□ -2.47
ATG31YDR022C COF1Q03048 143 aaKnown RBP-0.39□□□□□ -2.47
ATG31YDR022C SRX1P36077 127 aa-0.4□□□□□ -2.47
ATG31YDR022C YGL149WP53116 101 aa-0.4□□□□□ -2.47
ATG31YDR022C GTT2Q12390 233 aa-0.4□□□□□ -2.47
ATG31YDR022C YOL164W-AQ3E7A5 60 aa-0.4□□□□□ -2.47
ATG31YDR022C SNT2P53127 1403 aa-0.4□□□□□ -2.47
ATG31YDR022C AME1P38313 324 aa-0.41□□□□□ -2.48
ATG31YDR022C AIM18P38884 321 aa-0.41□□□□□ -2.48
ATG31YDR022C NSL1Q12143 216 aa-0.41□□□□□ -2.48
ATG31YDR022C ATP14Q12349 124 aa-0.41□□□□□ -2.48
ATG31YDR022C MED11Q99278 115 aa-0.41□□□□□ -2.48
ATG31YDR022C MRPL44P19956 98 aa-0.42□□□□□ -2.48
ATG31YDR022C GSP1P32835 219 aaKnown RBP-0.42□□□□□ -2.48
ATG31YDR022C RPS1AP33442 255 aaKnown RBP-0.42□□□□□ -2.48
ATG31YDR022C DER1P38307 211 aa-0.42□□□□□ -2.48
ATG31YDR022C YEA6P39953 335 aa-0.42□□□□□ -2.48
ATG31YDR022C YIL163CP40448 117 aa-0.42□□□□□ -2.48
ATG31YDR022C LSM8P47093 109 aaKnown RBP-0.42□□□□□ -2.48
ATG31YDR022C LCL1Q02786 101 aa-0.42□□□□□ -2.48
ATG31YDR022C LDB18Q07887 179 aa-0.42□□□□□ -2.48
ATG31YDR022C CMC2Q3E7A4 109 aa-0.42□□□□□ -2.48
ATG31YDR022C SUI1P32911 108 aaKnown RBP-0.43□□□□□ -2.48
ATG31YDR022C QCR10P37299 77 aa-0.43□□□□□ -2.48
ATG31YDR022C ARL3Q02804 198 aa-0.43□□□□□ -2.48
ATG31YDR022C CHD1P32657 1468 aa-0.43□□□□□ -2.48
ATG31YDR022C HAP3P13434 144 aa-0.44□□□□□ -2.48
ATG31YDR022C SUA7P29055 345 aaPredicted RBP-0.44□□□□□ -2.48
ATG31YDR022C YGR017WP53210 297 aa-0.44□□□□□ -2.48
ATG31YDR022C PET20Q99373 253 aa-0.44□□□□□ -2.48
ATG31YDR022C SEC7P11075 2009 aaKnown RBP-0.45□□□□□ -2.48
ATG31YDR022C SPG1P50088 95 aa-0.45□□□□□ -2.48
ATG31YDR022C FCF2Q12035 217 aaPredicted RBP-0.45□□□□□ -2.48
ATG31YDR022C YGR240C-AQ3E786 66 aa-0.45□□□□□ -2.48
ATG31YDR022C URB1P34241 1764 aaKnown RBP-0.45□□□□□ -2.48
ATG31YDR022C TY4B-HP0C2J7 1802 aa-0.45□□□□□ -2.48
ATG31YDR022C PAU21P0CE86 164 aa-0.46□□□□□ -2.48
ATG31YDR022C PAU22P0CE87 164 aa-0.46□□□□□ -2.48
ATG31YDR022C ICS3P47034 131 aa-0.46□□□□□ -2.48
ATG31YDR022C HHO1P53551 258 aa-0.46□□□□□ -2.48
ATG31YDR022C SDH7Q04401 133 aa-0.46□□□□□ -2.48
ATG31YDR022C OCA6Q12454 224 aa-0.46□□□□□ -2.48
ATG31YDR022C PRS3P38689 320 aaKnown RBP-0.47□□□□□ -2.48
ATG31YDR022C HSP10P38910 106 aa-0.47□□□□□ -2.48
ATG31YDR022C RAV2Q03956 351 aa-0.47□□□□□ -2.48
ATG31YDR022C ENV10Q99382 181 aa-0.47□□□□□ -2.48
ATG31YDR022C YRF1-6P53819 1859 aa-0.49□□□□□ -2.49
ATG31YDR022C RPL36BO14455 100 aaKnown RBP-0.49□□□□□ -2.49
ATG31YDR022C RPL36AP05745 100 aaPredicted RBP-0.49□□□□□ -2.49
ATG31YDR022C YCR050CP25630 102 aa-0.49□□□□□ -2.49
ATG31YDR022C YHR173CP38864 112 aa-0.49□□□□□ -2.49
ATG31YDR022C YAL064WP39711 94 aa-0.49□□□□□ -2.49
ATG31YDR022C EFM5P53200 248 aaKnown RBP-0.49□□□□□ -2.49
ATG31YDR022C YDR366CP87287 132 aa-0.49□□□□□ -2.49
ATG31YDR022C YMR320WQ04897 101 aa-0.49□□□□□ -2.49
ATG31YDR022C HPM1P40481 377 aa-0.5□□□□□ -2.49
ATG31YDR022C YNL190WP53872 204 aa-0.5□□□□□ -2.49
ATG31YDR022C PKR1Q03880 122 aaKnown RBP-0.5□□□□□ -2.49
ATG31YDR022C SPC3Q12133 184 aa-0.5□□□□□ -2.49
ATG31YDR022C YBR072C-AQ3E794 53 aa-0.5□□□□□ -2.49
ATG31YDR022C RPL22AP05749 121 aaKnown RBP-0.51□□□□□ -2.49
ATG31YDR022C PET54P10834 293 aa-0.51□□□□□ -2.49
ATG31YDR022C RPA12P32529 125 aaKnown RBP-0.51□□□□□ -2.49
ATG31YDR022C VPS55P47111 140 aa-0.51□□□□□ -2.49
ATG31YDR022C YOR1P53049 1477 aa-0.51□□□□□ -2.49
ATG31YDR022C HPA2Q06592 156 aa-0.52□□□□□ -2.49
ATG31YDR022C YGL041C-BQ3E750 60 aa-0.52□□□□□ -2.49
ATG31YDR022C YAP3P38749 330 aa-0.53□□□□□ -2.49
ATG31YDR022C TRM732Q03496 1420 aa-0.54□□□□□ -2.5
ATG31YDR022C RPL14AP36105 138 aaKnown RBP-0.54□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms