RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YBR242WP38331 238 aa1.32□□□□□ -2.2
SHR3YDL212W RPB11P38902 120 aa1.32□□□□□ -2.2
SHR3YDL212W RGI1P40043 161 aaPredicted RBP1.32□□□□□ -2.2
SHR3YDL212W SAE3P89114 91 aa1.32□□□□□ -2.2
SHR3YDL212W RPS25AQ3E792 108 aaPredicted RBP1.32□□□□□ -2.2
SHR3YDL212W MYO2P19524 1574 aaKnown RBP1.32□□□□□ -2.2
SHR3YDL212W YER039C-AP0CD97 72 aa1.31□□□□□ -2.2
SHR3YDL212W MRPL15P36523 253 aa1.31□□□□□ -2.2
SHR3YDL212W QCR10P37299 77 aa1.31□□□□□ -2.2
SHR3YDL212W YAL064WP39711 94 aa1.31□□□□□ -2.2
SHR3YDL212W HUA1P40325 198 aa1.31□□□□□ -2.2
SHR3YDL212W RPL37AP49166 88 aaKnown RBP1.31□□□□□ -2.2
SHR3YDL212W YMR007WQ03675 126 aa1.31□□□□□ -2.2
SHR3YDL212W YPR153WQ06537 140 aa1.31□□□□□ -2.2
SHR3YDL212W YPR203WQ08994 102 aa1.31□□□□□ -2.2
SHR3YDL212W FCF2Q12035 217 aaPredicted RBP1.31□□□□□ -2.2
SHR3YDL212W SPP41P38904 1435 aa1.31□□□□□ -2.2
SHR3YDL212W COX5BP00425 151 aa1.3□□□□□ -2.2
SHR3YDL212W MRPL44P19956 98 aa1.3□□□□□ -2.2
SHR3YDL212W FYV5P25585 152 aa1.3□□□□□ -2.2
SHR3YDL212W HSP150P32478 413 aa1.3□□□□□ -2.2
SHR3YDL212W LHP1P33399 275 aaKnown RBP1.3□□□□□ -2.2
SHR3YDL212W UTP11P34247 250 aaPredicted RBP1.3□□□□□ -2.2
SHR3YDL212W YEL014CP39999 101 aa1.3□□□□□ -2.2
SHR3YDL212W YCL001W-AP87012 153 aa1.3□□□□□ -2.2
SHR3YDL212W AVO2Q04749 426 aa1.3□□□□□ -2.2
SHR3YDL212W YOR097CQ12274 175 aaPredicted RBP1.3□□□□□ -2.2
SHR3YDL212W ADK1P07170 222 aaKnown RBP1.29□□□□□ -2.2
SHR3YDL212W ANB1P19211 157 aa1.29□□□□□ -2.2
SHR3YDL212W RPS12P48589 143 aaKnown RBP1.29□□□□□ -2.2
SHR3YDL212W YGL230CP53074 147 aa1.29□□□□□ -2.2
SHR3YDL212W YLR042CQ07990 161 aa1.29□□□□□ -2.2
SHR3YDL212W YOR289WQ12012 251 aaPredicted RBP1.29□□□□□ -2.2
SHR3YDL212W FYV7Q12247 151 aa1.29□□□□□ -2.2
SHR3YDL212W CMC4Q3E7A9 73 aa1.29□□□□□ -2.2
SHR3YDL212W TSC11P40061 1430 aa1.29□□□□□ -2.2
SHR3YDL212W YCR101CP25607 182 aa1.28□□□□□ -2.2
SHR3YDL212W YCR099CP25657 155 aa1.28□□□□□ -2.2
SHR3YDL212W SRL3P36167 246 aa1.28□□□□□ -2.2
SHR3YDL212W ECM31P38122 312 aa1.28□□□□□ -2.2
SHR3YDL212W IPT1P38954 527 aa1.28□□□□□ -2.2
SHR3YDL212W BRP1P53194 125 aa1.28□□□□□ -2.2
SHR3YDL212W NAT5Q08689 176 aa1.28□□□□□ -2.2
SHR3YDL212W GTT2Q12390 233 aa1.28□□□□□ -2.2
SHR3YDL212W YOR376W-AQ3E805 51 aa1.28□□□□□ -2.2
SHR3YDL212W TOP2P06786 1428 aaKnown RBP1.28□□□□□ -2.2
SHR3YDL212W YAR029WP39549 74 aa1.27□□□□□ -2.21
SHR3YDL212W DCV1P43595 202 aa1.27□□□□□ -2.21
SHR3YDL212W YFR035CP43608 114 aa1.27□□□□□ -2.21
SHR3YDL212W YGR164WP53291 111 aa1.27□□□□□ -2.21
SHR3YDL212W GPI11Q06636 219 aa1.27□□□□□ -2.21
SHR3YDL212W PAU21P0CE86 164 aa1.26□□□□□ -2.21
SHR3YDL212W PAU22P0CE87 164 aa1.26□□□□□ -2.21
SHR3YDL212W SEC59P20048 519 aa1.26□□□□□ -2.21
SHR3YDL212W YHL037CP38733 133 aa1.26□□□□□ -2.21
SHR3YDL212W PAM16P42949 149 aa1.26□□□□□ -2.21
SHR3YDL212W ERV14P53173 138 aa1.26□□□□□ -2.21
SHR3YDL212W FIT1Q04433 528 aa1.26□□□□□ -2.21
SHR3YDL212W YPL225WQ08971 146 aaKnown RBP1.26□□□□□ -2.21
SHR3YDL212W RTR2Q12378 196 aa1.26□□□□□ -2.21
SHR3YDL212W SLH1P53327 1967 aaKnown RBP1.26□□□□□ -2.21
SHR3YDL212W HAP3P13434 144 aa1.25□□□□□ -2.21
SHR3YDL212W FUN14P18411 198 aa1.25□□□□□ -2.21
SHR3YDL212W PRE1P22141 198 aaKnown RBP1.25□□□□□ -2.21
SHR3YDL212W BUD23P25627 275 aaPredicted RBP1.25□□□□□ -2.21
SHR3YDL212W YKL044WP36092 106 aa1.25□□□□□ -2.21
SHR3YDL212W YBR090CP38253 122 aa1.25□□□□□ -2.21
SHR3YDL212W HSP10P38910 106 aa1.25□□□□□ -2.21
SHR3YDL212W SNF11P38956 169 aa1.25□□□□□ -2.21
SHR3YDL212W YFL051CP43552 160 aa1.25□□□□□ -2.21
SHR3YDL212W OCA6Q12454 224 aa1.25□□□□□ -2.21
SHR3YDL212W UBC5P15732 148 aa1.24□□□□□ -2.21
SHR3YDL212W GNA1P43577 159 aaPredicted RBP1.24□□□□□ -2.21
SHR3YDL212W YPL067CQ02754 198 aa1.24□□□□□ -2.21
SHR3YDL212W GPI19Q04082 140 aa1.24□□□□□ -2.21
SHR3YDL212W LCL2Q08045 131 aa1.24□□□□□ -2.21
SHR3YDL212W EMP24P32803 203 aaKnown RBP1.23□□□□□ -2.21
SHR3YDL212W AIM18P38884 321 aa1.23□□□□□ -2.21
SHR3YDL212W YGL149WP53116 101 aa1.23□□□□□ -2.21
SHR3YDL212W BUD4P47136 1447 aa1.23□□□□□ -2.21
SHR3YDL212W RTC6O14464 93 aa1.22□□□□□ -2.21
SHR3YDL212W HAP2P06774 265 aa1.22□□□□□ -2.21
SHR3YDL212W HYP2P23301 157 aaKnown RBP1.22□□□□□ -2.21
SHR3YDL212W MRPL11P36521 249 aaPredicted RBP1.22□□□□□ -2.21
SHR3YDL212W YBR027CP38220 110 aa1.22□□□□□ -2.21
SHR3YDL212W YEA6P39953 335 aa1.22□□□□□ -2.21
SHR3YDL212W SED1Q01589 338 aa1.22□□□□□ -2.21
SHR3YDL212W YMR103CQ04436 120 aa1.22□□□□□ -2.21
SHR3YDL212W VAM10Q08474 114 aa1.22□□□□□ -2.21
SHR3YDL212W YLR365WQ7LIF2 110 aa1.22□□□□□ -2.21
SHR3YDL212W MED11Q99278 115 aa1.22□□□□□ -2.21
SHR3YDL212W KRE5P22023 1365 aa1.21□□□□□ -2.21
SHR3YDL212W RPL36BO14455 100 aaKnown RBP1.21□□□□□ -2.22
SHR3YDL212W RPL36AP05745 100 aaPredicted RBP1.21□□□□□ -2.22
SHR3YDL212W YJL197C-AP0C5P0 93 aa1.21□□□□□ -2.22
SHR3YDL212W YHR213WP0CI67 198 aa1.21□□□□□ -2.22
SHR3YDL212W TDA2P40045 126 aa1.21□□□□□ -2.22
SHR3YDL212W YLR296WQ05898 108 aa1.21□□□□□ -2.22
SHR3YDL212W ZEO1Q08245 113 aa1.21□□□□□ -2.22
SHR3YDL212W MHF1Q3E835 90 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms