RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W YBR220CP38318 560 aa5.7□□□□□ -1.5
NUP84YDL116W ADH6Q04894 360 aaKnown RBP5.7□□□□□ -1.5
NUP84YDL116W YMR105W-AQ8TGS8 64 aa5.7□□□□□ -1.5
NUP84YDL116W SEN1Q00416 2231 aaKnown RBP5.69□□□□□ -1.5
NUP84YDL116W HMRA1P0CY11 126 aa5.69□□□□□ -1.5
NUP84YDL116W YGL118CP53132 145 aa5.69□□□□□ -1.5
NUP84YDL116W YGR018CP53211 109 aa5.69□□□□□ -1.5
NUP84YDL116W CAB4P53332 305 aa5.69□□□□□ -1.5
NUP84YDL116W DAD4P69851 72 aa5.69□□□□□ -1.5
NUP84YDL116W AYT1Q12226 474 aa5.69□□□□□ -1.5
NUP84YDL116W TRA1P38811 3744 aa5.68□□□□□ -1.5
NUP84YDL116W YPS1P32329 569 aa5.68□□□□□ -1.5
NUP84YDL116W YKR032WP36127 104 aa5.68□□□□□ -1.5
NUP84YDL116W YKR045CP36138 183 aa5.68□□□□□ -1.5
NUP84YDL116W SGN1P40561 250 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
NUP84YDL116W YFL051CP43552 160 aa5.68□□□□□ -1.5
NUP84YDL116W YPI1P43587 155 aa5.68□□□□□ -1.5
NUP84YDL116W COX16P47081 118 aa5.68□□□□□ -1.5
NUP84YDL116W YIL014C-AQ02598 104 aa5.68□□□□□ -1.5
NUP84YDL116W VPS71Q03433 280 aa5.68□□□□□ -1.5
NUP84YDL116W RXT3Q07458 294 aa5.68□□□□□ -1.5
NUP84YDL116W GAT3Q07928 141 aa5.68□□□□□ -1.5
NUP84YDL116W YPL257WQ08974 193 aa5.68□□□□□ -1.5
NUP84YDL116W YLR363W-AQ3E747 85 aa5.68□□□□□ -1.5
NUP84YDL116W DAL82P21705 255 aa5.67□□□□□ -1.5
NUP84YDL116W YOX1P34161 385 aa5.67□□□□□ -1.5
NUP84YDL116W YAR068WP39564 161 aa5.67□□□□□ -1.5
NUP84YDL116W YNL234WP53857 426 aa5.67□□□□□ -1.5
NUP84YDL116W FCY1Q12178 158 aa5.67□□□□□ -1.5
NUP84YDL116W FEN2P25621 512 aaKnown RBP5.67□□□□□ -1.5
NUP84YDL116W ADH5P38113 351 aaKnown RBP5.67□□□□□ -1.5
NUP84YDL116W ATP19P81451 68 aa5.67□□□□□ -1.5
NUP84YDL116W ADH1P00330 348 aaKnown RBP5.66□□□□□ -1.5
NUP84YDL116W TIR2P33890 251 aa5.66□□□□□ -1.5
NUP84YDL116W WWM1P43582 211 aaKnown RBP5.66□□□□□ -1.5
NUP84YDL116W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
NUP84YDL116W SLO1Q3E784 85 aa5.66□□□□□ -1.5
NUP84YDL116W YLR415CO13578 112 aa5.66□□□□□ -1.5
NUP84YDL116W YBL071CP38185 102 aa5.66□□□□□ -1.5
NUP84YDL116W YGR025WP53216 100 aa5.66□□□□□ -1.5
NUP84YDL116W GTO3Q04806 366 aa5.66□□□□□ -1.5
NUP84YDL116W YDL218WQ07629 317 aa5.66□□□□□ -1.5
NUP84YDL116W YPT10P38146 199 aa5.65□□□□□ -1.5
NUP84YDL116W GEP3Q08622 556 aa5.65□□□□□ -1.5
NUP84YDL116W PAI3P01094 68 aa5.65□□□□□ -1.51
NUP84YDL116W HEM4P06174 275 aa5.65□□□□□ -1.51
NUP84YDL116W YFL068WP0CX99 160 aa5.65□□□□□ -1.51
NUP84YDL116W YLL066W-AP0CY00 160 aa5.65□□□□□ -1.51
NUP84YDL116W YLL067W-AP0CY01 160 aa5.65□□□□□ -1.51
NUP84YDL116W MDM10P18409 493 aa5.65□□□□□ -1.51
NUP84YDL116W YOR032W-AQ8TGS1 66 aa5.65□□□□□ -1.51
NUP84YDL116W TIR1P10863 254 aa5.64□□□□□ -1.51
NUP84YDL116W CPR1P14832 162 aaKnown RBP5.64□□□□□ -1.51
NUP84YDL116W CSH1P38287 376 aa5.64□□□□□ -1.51
NUP84YDL116W YJL213WP40896 331 aa5.64□□□□□ -1.51
NUP84YDL116W MBB1P39534 108 aa5.63□□□□□ -1.51
NUP84YDL116W URM1P40554 99 aaPredicted RBP5.63□□□□□ -1.51
NUP84YDL116W BET5Q03630 159 aa5.63□□□□□ -1.51
NUP84YDL116W JID1Q12350 301 aa5.63□□□□□ -1.51
NUP84YDL116W DAL80P26343 269 aa5.63□□□□□ -1.51
NUP84YDL116W GAR1P28007 205 aaKnown RBP5.63□□□□□ -1.51
NUP84YDL116W YFR057WP43625 151 aa5.63□□□□□ -1.51
NUP84YDL116W DGA1Q08650 418 aa5.63□□□□□ -1.51
NUP84YDL116W DAD1Q12248 94 aa5.63□□□□□ -1.51
NUP84YDL116W CPT1P17898 393 aa5.62□□□□□ -1.51
NUP84YDL116W YCR007CP25354 239 aa5.62□□□□□ -1.51
NUP84YDL116W HST4P53688 370 aa5.62□□□□□ -1.51
NUP84YDL116W CYC3P06182 269 aa5.62□□□□□ -1.51
NUP84YDL116W YHR213WP0CI67 198 aa5.62□□□□□ -1.51
NUP84YDL116W ARO2P28777 376 aaKnown RBP5.62□□□□□ -1.51
NUP84YDL116W GLE2P40066 365 aa5.62□□□□□ -1.51
NUP84YDL116W MSA1Q08471 629 aa5.62□□□□□ -1.51
NUP84YDL116W CMC1P36064 111 aa5.61□□□□□ -1.51
NUP84YDL116W PAU7P39545 55 aa5.61□□□□□ -1.51
NUP84YDL116W SED1Q01589 338 aa5.61□□□□□ -1.51
NUP84YDL116W MRX11Q03079 207 aa5.61□□□□□ -1.51
NUP84YDL116W YMR181CQ03231 154 aa5.61□□□□□ -1.51
NUP84YDL116W ECM33P38248 429 aaKnown RBP5.6□□□□□ -1.51
NUP84YDL116W SNF11P38956 169 aa5.6□□□□□ -1.51
NUP84YDL116W YEL067CP39978 195 aa5.6□□□□□ -1.51
NUP84YDL116W VHS2P40463 436 aa5.6□□□□□ -1.51
NUP84YDL116W SSU72P53538 206 aaPredicted RBP5.6□□□□□ -1.51
NUP84YDL116W MST27P53176 234 aa5.6□□□□□ -1.51
NUP84YDL116W ANB1P19211 157 aa5.59□□□□□ -1.51
NUP84YDL116W MRP49P32388 137 aa5.59□□□□□ -1.51
NUP84YDL116W APS1P35181 156 aa5.59□□□□□ -1.51
NUP84YDL116W ECM14P38836 430 aa5.59□□□□□ -1.51
NUP84YDL116W YIL012WP40551 113 aa5.59□□□□□ -1.51
NUP84YDL116W YJL163CP46996 555 aa5.59□□□□□ -1.51
NUP84YDL116W ATP23P53722 227 aa5.59□□□□□ -1.51
NUP84YDL116W YNR064CP53750 290 aa5.59□□□□□ -1.51
NUP84YDL116W YMR103CQ04436 120 aa5.59□□□□□ -1.51
NUP84YDL116W YDL009CQ12210 107 aa5.59□□□□□ -1.51
NUP84YDL116W YDL022C-AP0C5L6 82 aa5.59□□□□□ -1.52
NUP84YDL116W HYP2P23301 157 aaKnown RBP5.59□□□□□ -1.52
NUP84YDL116W YCR023CP25351 611 aa5.59□□□□□ -1.52
NUP84YDL116W YJL118WP47022 219 aa5.59□□□□□ -1.52
NUP84YDL116W DIA1P54005 336 aa5.58□□□□□ -1.52
NUP84YDL116W SCW10Q04951 389 aa5.58□□□□□ -1.52
NUP84YDL116W YCL048W-AQ2V2Q2 79 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms