RNA–Protein interactions for RNA: YDL008W

APC11, Transcript of Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C), yeastyeast

Gene APC11, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APC11YDL008W YHR212W-AP0CX91 67 aa1.89□□□□□ -2.11
APC11YDL008W MRPS28P21771 286 aa1.89□□□□□ -2.11
APC11YDL008W YBL010CP32788 280 aa1.89□□□□□ -2.11
APC11YDL008W ERJ5P43613 295 aaPredicted RBP1.89□□□□□ -2.11
APC11YDL008W LSM1P47017 172 aaKnown RBP1.89□□□□□ -2.11
APC11YDL008W CCC1P47818 322 aa1.89□□□□□ -2.11
APC11YDL008W RFU1Q08003 200 aa1.89□□□□□ -2.11
APC11YDL008W YOL118CQ08259 102 aa1.89□□□□□ -2.11
APC11YDL008W YLR099W-AQ3E798 87 aa1.89□□□□□ -2.11
APC11YDL008W URA5P13298 226 aaKnown RBP1.88□□□□□ -2.11
APC11YDL008W MRS4P23500 304 aa1.88□□□□□ -2.11
APC11YDL008W PAU24P38155 120 aa1.88□□□□□ -2.11
APC11YDL008W UMP1P38293 148 aa1.88□□□□□ -2.11
APC11YDL008W RIO2P40160 425 aaKnown RBP1.88□□□□□ -2.11
APC11YDL008W YIR035CP40579 254 aa1.88□□□□□ -2.11
APC11YDL008W SER2P42941 309 aa1.88□□□□□ -2.11
APC11YDL008W YJR146WP47174 117 aa1.88□□□□□ -2.11
APC11YDL008W DOC1P53068 250 aa1.88□□□□□ -2.11
APC11YDL008W PAU12P53343 120 aa1.88□□□□□ -2.11
APC11YDL008W YDR274CP87283 123 aa1.88□□□□□ -2.11
APC11YDL008W ATO3Q12359 275 aa1.88□□□□□ -2.11
APC11YDL008W YGL041W-AP0C5N3 154 aa1.87□□□□□ -2.11
APC11YDL008W PET54P10834 293 aa1.87□□□□□ -2.11
APC11YDL008W BUD23P25627 275 aaPredicted RBP1.87□□□□□ -2.11
APC11YDL008W SNC2P33328 115 aa1.87□□□□□ -2.11
APC11YDL008W CPR5P35176 225 aa1.87□□□□□ -2.11
APC11YDL008W YFL019CP43576 117 aa1.87□□□□□ -2.11
APC11YDL008W YJL027CP47063 138 aaPredicted RBP1.87□□□□□ -2.11
APC11YDL008W GPI14P47088 403 aaKnown RBP1.87□□□□□ -2.11
APC11YDL008W DSK2P48510 373 aa1.87□□□□□ -2.11
APC11YDL008W VMA10P48836 114 aaKnown RBP1.87□□□□□ -2.11
APC11YDL008W YGL204CP53089 101 aa1.87□□□□□ -2.11
APC11YDL008W YGR026WP53217 278 aa1.87□□□□□ -2.11
APC11YDL008W YGR042WP53227 271 aa1.87□□□□□ -2.11
APC11YDL008W NAT3Q06504 195 aa1.87□□□□□ -2.11
APC11YDL008W YLR031WQ07978 186 aa1.87□□□□□ -2.11
APC11YDL008W DGK1Q12382 290 aa1.87□□□□□ -2.11
APC11YDL008W YDL012CQ12489 107 aa1.87□□□□□ -2.11
APC11YDL008W TSC3Q3E790 80 aa1.87□□□□□ -2.11
APC11YDL008W YML100W-AQ8TGT0 57 aa1.87□□□□□ -2.11
APC11YDL008W COX9P07255 59 aa1.86□□□□□ -2.11
APC11YDL008W RPL2AP0CX45 254 aaKnown RBP1.86□□□□□ -2.11
APC11YDL008W RPL2BP0CX46 254 aaKnown RBP1.86□□□□□ -2.11
APC11YDL008W ROX3P25046 220 aa1.86□□□□□ -2.11
APC11YDL008W PAU2P32612 120 aa1.86□□□□□ -2.11
APC11YDL008W SFK1P35735 353 aa1.86□□□□□ -2.11
APC11YDL008W YEA4P40004 342 aa1.86□□□□□ -2.11
APC11YDL008W VTC1P40046 129 aaRIP-Chip data1.86□□□□□ -2.11not detected
APC11YDL008W YJL218WP40892 196 aaKnown RBP1.86□□□□□ -2.11
APC11YDL008W SNX4P47057 423 aa1.86□□□□□ -2.11
APC11YDL008W XPT1P47165 209 aa1.86□□□□□ -2.11
APC11YDL008W FIT1Q04433 528 aa1.86□□□□□ -2.11
APC11YDL008W YPR195CQ06594 109 aa1.86□□□□□ -2.11
APC11YDL008W RDS3Q06835 107 aaPredicted RBP1.86□□□□□ -2.11
APC11YDL008W YPR014CQ6B0W2 109 aa1.86□□□□□ -2.11
APC11YDL008W MED11Q99278 115 aa1.86□□□□□ -2.11
APC11YDL008W ODC2Q99297 307 aa1.86□□□□□ -2.11
APC11YDL008W SPO13P23624 291 aa1.85□□□□□ -2.11
APC11YDL008W PEX4P29340 183 aa1.85□□□□□ -2.11
APC11YDL008W SHE2P36068 246 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
APC11YDL008W PAN3P36102 679 aaPredicted RBP1.85□□□□□ -2.11
APC11YDL008W FCY21P40039 528 aa1.85□□□□□ -2.11
APC11YDL008W RFC2P40348 353 aa1.85□□□□□ -2.11
APC11YDL008W GVP36P40531 326 aaKnown RBP1.85□□□□□ -2.11
APC11YDL008W TDA4P47153 279 aa1.85□□□□□ -2.11
APC11YDL008W YGL088WP53151 121 aa1.85□□□□□ -2.11
APC11YDL008W ORM1P53224 222 aa1.85□□□□□ -2.11
APC11YDL008W YPL067CQ02754 198 aa1.85□□□□□ -2.11
APC11YDL008W MIX17Q03667 156 aa1.85□□□□□ -2.11
APC11YDL008W FYV12Q08559 129 aa1.85□□□□□ -2.11
APC11YDL008W ATG41Q12048 136 aa1.85□□□□□ -2.11
APC11YDL008W YOS1Q3E834 85 aa1.85□□□□□ -2.11
APC11YDL008W ATG40Q99325 256 aa1.85□□□□□ -2.11
APC11YDL008W UBI4P0CG63 381 aaKnown RBP1.84□□□□□ -2.11
APC11YDL008W RPB7P34087 171 aa1.84□□□□□ -2.11
APC11YDL008W TMA19P35691 167 aaKnown RBP1.84□□□□□ -2.11
APC11YDL008W YAE1P47118 141 aaPredicted RBP1.84□□□□□ -2.11
APC11YDL008W TTI2P47168 421 aa1.84□□□□□ -2.11
APC11YDL008W MPC3P53311 146 aa1.84□□□□□ -2.11
APC11YDL008W YNR077CP53758 84 aa1.84□□□□□ -2.11
APC11YDL008W THI74Q04083 370 aa1.84□□□□□ -2.11
APC11YDL008W UPS1Q05776 175 aa1.84□□□□□ -2.11
APC11YDL008W NEJ1Q06148 342 aa1.84□□□□□ -2.11
APC11YDL008W YAR023CD6VPM8 179 aa1.83□□□□□ -2.12
APC11YDL008W POR1P04840 283 aaKnown RBP1.83□□□□□ -2.12
APC11YDL008W SEN2P16658 377 aa1.83□□□□□ -2.12
APC11YDL008W SCM4P32564 187 aa1.83□□□□□ -2.12
APC11YDL008W YKR045CP36138 183 aa1.83□□□□□ -2.12
APC11YDL008W HTD2P38790 280 aaKnown RBP1.83□□□□□ -2.12
APC11YDL008W CCS1P40202 249 aaKnown RBP1.83□□□□□ -2.12
APC11YDL008W PGD1P40356 397 aa1.83□□□□□ -2.12
APC11YDL008W GNA1P43577 159 aaPredicted RBP1.83□□□□□ -2.12
APC11YDL008W PLP1Q04004 230 aa1.83□□□□□ -2.12
APC11YDL008W IRC23Q08416 157 aa1.83□□□□□ -2.12
APC11YDL008W RPL26AP05743 127 aaKnown RBP1.82□□□□□ -2.12
APC11YDL008W PHO85P17157 305 aa1.82□□□□□ -2.12
APC11YDL008W FMT1P32785 401 aa1.82□□□□□ -2.12
APC11YDL008W IPI1P38803 334 aaPredicted RBP1.82□□□□□ -2.12
APC11YDL008W YER134CP40081 178 aa1.82□□□□□ -2.12
APC11YDL008W MOG1P47123 218 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms