RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF5	YBR289W	CUE4	Q04201	117 aa	Predicted RBP	0.89	□□□□□ -2.27
SNF5	YBR289W	SYM1	Q06563	197 aa		0.89	□□□□□ -2.27
SNF5	YBR289W	YPR013C	Q12145	317 aa		0.89	□□□□□ -2.27
SNF5	YBR289W	RAD6	P06104	172 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	HSP30	P25619	332 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	TRS20	P38334	175 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	HTD2	P38790	280 aa	Known RBP	0.88	□□□□□ -2.27
SNF5	YBR289W	HPA3	P39979	161 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	PHB1	P40961	287 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	TIM8	P57744	87 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	COF1	Q03048	143 aa	Known RBP	0.88	□□□□□ -2.27
SNF5	YBR289W	FMN1	Q03778	218 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	TAO3	P40468	2376 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	YRF1-3	P0CX14	1859 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	YRF1-7	P0CX15	1859 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	YRF1-6	P53819	1859 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	MLP1	Q02455	1875 aa	Known RBP	0.88	□□□□□ -2.27
SNF5	YBR289W	GCN1	P33892	2672 aa	Known RBP	0.88	□□□□□ -2.27
SNF5	YBR289W	SUA7	P29055	345 aa	Predicted RBP	0.88	□□□□□ -2.27
SNF5	YBR289W	RPB7	P34087	171 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	GLC8	P41818	229 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	DYN2	Q02647	92 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	RIM9	Q04734	239 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	YHR007C-A	Q07074	71 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	UBR1	P19812	1950 aa		0.88	□□□□□ -2.27
SNF5	YBR289W	PHO13	P19881	312 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	MRPL24	P36525	258 aa	Predicted RBP	0.87	□□□□□ -2.27
SNF5	YBR289W	RIO2	P40160	425 aa	Known RBP	0.87	□□□□□ -2.27
SNF5	YBR289W	YDR102C	Q03864	110 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	ELP6	Q04868	273 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	UPS1	Q05776	175 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	NHP6A	P11632	93 aa	Known RBP	0.87	□□□□□ -2.27
SNF5	YBR289W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
SNF5	YBR289W	GPI2	P46961	280 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	HHO1	P53551	258 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	RCF2	P53721	224 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	YDR366C	P87287	132 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	MZM1	Q03429	123 aa	Predicted RBP	0.87	□□□□□ -2.27
SNF5	YBR289W	YHP1	Q04116	353 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	YDR278C	Q05612	105 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	YNL146C-A	Q3E7Z1	64 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	HKR1	P41809	1802 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	FAS2	P19097	1887 aa	Known RBP	0.87	□□□□□ -2.27
SNF5	YBR289W	SRP21	P32342	167 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	YHR140W	P38842	239 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	EST3	Q03096	181 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	LIP1	Q03579	150 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	YDR391C	Q04170	232 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	SPC24	Q04477	213 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	SPC3	Q12133	184 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	TAR1	Q8TGM6	124 aa		0.87	□□□□□ -2.27
SNF5	YBR289W	ADE6	P38972	1358 aa	Known RBP	0.86	□□□□□ -2.27
SNF5	YBR289W	MRS4	P23500	304 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	ETR1	P38071	380 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	YEL073C	P39974	107 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	YGR039W	P53225	103 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	YNR064C	P53750	290 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	CWC27	Q02770	301 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	PRP11	Q07350	266 aa	Predicted RBP	0.86	□□□□□ -2.27
SNF5	YBR289W	YPD1	Q07688	167 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	COA3	Q3E7B2	85 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	FLO1	P32768	1537 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	DDR48	P18899	430 aa	Known RBP	0.86	□□□□□ -2.27
SNF5	YBR289W	RPS20	P38701	121 aa	Known RBP	0.86	□□□□□ -2.27
SNF5	YBR289W	NSE4	P43124	402 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	PIR1	Q03178	341 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	DML1	Q03652	475 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	YPR114W	Q06107	315 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	YPR174C	Q06616	221 aa	Predicted RBP	0.86	□□□□□ -2.27
SNF5	YBR289W	YDL241W	Q07738	123 aa		0.86	□□□□□ -2.27
SNF5	YBR289W	URA2	P07259	2214 aa	Known RBP	0.86	□□□□□ -2.27
SNF5	YBR289W	MDN1	Q12019	4910 aa	Known RBP	0.85	□□□□□ -2.27
SNF5	YBR289W	VAR1	P02381	398 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	HSP12	P22943	109 aa	Known RBP	0.85	□□□□□ -2.27
SNF5	YBR289W	AHT1	P29589	182 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	SUI1	P32911	108 aa	Known RBP	0.85	□□□□□ -2.27
SNF5	YBR289W	SHB17	P36136	271 aa	Known RBP	0.85	□□□□□ -2.27
SNF5	YBR289W	CIN5	P40917	295 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	RCE1	Q03530	315 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	ATG41	Q12048	136 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	FCY1	Q12178	158 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	FMP49	A0A023PZB3	126 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	YHR212W-A	P0CX91	67 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	RPC19	P28000	142 aa	Known RBP	0.85	□□□□□ -2.27
SNF5	YBR289W	GSP2	P32836	220 aa	Known RBP	0.85	□□□□□ -2.27
SNF5	YBR289W	YPT31	P38555	223 aa	Known RBP	0.85	□□□□□ -2.27
SNF5	YBR289W	UPS3	Q04006	179 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	WIP1	Q2V2P8	89 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	SLO1	Q3E784	85 aa		0.85	□□□□□ -2.27
SNF5	YBR289W	RPL22A	P05749	121 aa	Known RBP	0.84	□□□□□ -2.27
SNF5	YBR289W	HYM1	P32464	399 aa		0.84	□□□□□ -2.27
SNF5	YBR289W	RPS1A	P33442	255 aa	Known RBP	0.84	□□□□□ -2.27
SNF5	YBR289W	RPL14A	P36105	138 aa	Known RBP	0.84	□□□□□ -2.27
SNF5	YBR289W	RPL14B	P38754	138 aa	Known RBP	0.84	□□□□□ -2.27
SNF5	YBR289W	APS3	P47064	194 aa		0.84	□□□□□ -2.27
SNF5	YBR289W	PAC10	P48363	199 aa		0.84	□□□□□ -2.27
SNF5	YBR289W	VMA10	P48836	114 aa	Known RBP	0.84	□□□□□ -2.27
SNF5	YBR289W	GEP7	P53171	287 aa		0.84	□□□□□ -2.27
SNF5	YBR289W	YNL019C	P53975	284 aa		0.84	□□□□□ -2.27
SNF5	YBR289W	CNL1	Q06333	122 aa		0.84	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms