RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W PBA1Q05778 276 aa4.05□□□□□ -1.76
SHP1YBL058W YLL066W-BQ8TGJ7 56 aa4.05□□□□□ -1.76
SHP1YBL058W KRE9P39005 276 aa4.04□□□□□ -1.76
SHP1YBL058W KEG1P43614 200 aa4.04□□□□□ -1.76
SHP1YBL058W BRP1P53194 125 aa4.04□□□□□ -1.76
SHP1YBL058W YNR066CP53752 436 aa4.04□□□□□ -1.76
SHP1YBL058W SDO1Q07953 250 aaKnown RBP4.04□□□□□ -1.76
SHP1YBL058W RTC6O14464 93 aa4.03□□□□□ -1.76
SHP1YBL058W RPL16BP26785 198 aaKnown RBP4.03□□□□□ -1.76
SHP1YBL058W COQ3P27680 312 aa4.03□□□□□ -1.76
SHP1YBL058W RPS0AP32905 252 aaKnown RBP4.03□□□□□ -1.76
SHP1YBL058W YPT53P36019 220 aa4.03□□□□□ -1.76
SHP1YBL058W YNL217WP40152 326 aa4.03□□□□□ -1.76
SHP1YBL058W YJL028WP47062 111 aa4.03□□□□□ -1.76
SHP1YBL058W CAF40P53829 373 aa4.03□□□□□ -1.76
SHP1YBL058W YOR015WQ12169 119 aa4.03□□□□□ -1.76
SHP1YBL058W RPL31BP0C2H9 113 aaKnown RBP4.02□□□□□ -1.77
SHP1YBL058W LAC1P28496 418 aa4.02□□□□□ -1.77
SHP1YBL058W TAD2P47058 250 aa4.02□□□□□ -1.77
SHP1YBL058W COX16P47081 118 aa4.02□□□□□ -1.77
SHP1YBL058W YLR042CQ07990 161 aa4.02□□□□□ -1.77
SHP1YBL058W UTP23Q12339 254 aaKnown RBP4.02□□□□□ -1.77
SHP1YBL058W YHR173CP38864 112 aa4.01□□□□□ -1.77
SHP1YBL058W MRPS17Q03246 237 aaPredicted RBP4.01□□□□□ -1.77
SHP1YBL058W ANT1Q06497 328 aa4.01□□□□□ -1.77
SHP1YBL058W YGL194C-AQ2V2P6 80 aa4.01□□□□□ -1.77
SHP1YBL058W YBR200W-AQ3E755 54 aa4.01□□□□□ -1.77
SHP1YBL058W SAR1P20606 190 aaKnown RBP4□□□□□ -1.77
SHP1YBL058W AGA1P32323 725 aa4□□□□□ -1.77
SHP1YBL058W MRPL28P36527 147 aa4□□□□□ -1.77
SHP1YBL058W YPT10P38146 199 aa4□□□□□ -1.77
SHP1YBL058W AME1P38313 324 aa4□□□□□ -1.77
SHP1YBL058W POG1P40473 351 aa4□□□□□ -1.77
SHP1YBL058W DAD4P69851 72 aa4□□□□□ -1.77
SHP1YBL058W AIM34Q03673 198 aa4□□□□□ -1.77
SHP1YBL058W DPP1Q05521 289 aa4□□□□□ -1.77
SHP1YBL058W YLR342W-AQ3E810 57 aa4□□□□□ -1.77
SHP1YBL058W RRT15Q3E811 62 aa4□□□□□ -1.77
SHP1YBL058W RPL33AP05744 107 aaKnown RBP3.99□□□□□ -1.77
SHP1YBL058W UBI4P0CG63 381 aaKnown RBP3.99□□□□□ -1.77
SHP1YBL058W MAG1P22134 296 aaKnown RBP3.99□□□□□ -1.77
SHP1YBL058W YBR292CP38357 123 aa3.99□□□□□ -1.77
SHP1YBL058W RPL33BP41056 107 aaKnown RBP3.99□□□□□ -1.77
SHP1YBL058W LOC1P43586 204 aaPredicted RBP3.99□□□□□ -1.77
SHP1YBL058W ADD37Q03233 198 aa3.99□□□□□ -1.77
SHP1YBL058W DFM1Q12743 341 aaKnown RBP3.99□□□□□ -1.77
SHP1YBL058W RNA15P25299 296 aaPredicted RBP3.98□□□□□ -1.77
SHP1YBL058W HMX1P32339 317 aa3.98□□□□□ -1.77
SHP1YBL058W KTI12P34253 313 aaKnown RBP3.98□□□□□ -1.77
SHP1YBL058W YIL163CP40448 117 aa3.98□□□□□ -1.77
SHP1YBL058W SRB7P47822 140 aa3.98□□□□□ -1.77
SHP1YBL058W YGL185CP53100 379 aa3.98□□□□□ -1.77
SHP1YBL058W TIM21P53220 239 aa3.98□□□□□ -1.77
SHP1YBL058W ERI1P62651 68 aaKnown RBP3.98□□□□□ -1.77
SHP1YBL058W DAD1Q12248 94 aa3.98□□□□□ -1.77
SHP1YBL058W YBR085C-AO43137 85 aa3.97□□□□□ -1.77
SHP1YBL058W RPL14AP36105 138 aaKnown RBP3.97□□□□□ -1.77
SHP1YBL058W YBR013CP38215 129 aa3.97□□□□□ -1.77
SHP1YBL058W RPL14BP38754 138 aaKnown RBP3.97□□□□□ -1.77
SHP1YBL058W SVP26P38869 228 aa3.97□□□□□ -1.77
SHP1YBL058W GCV3P39726 170 aaPredicted RBP3.97□□□□□ -1.77
SHP1YBL058W EMC5P40540 141 aa3.97□□□□□ -1.77
SHP1YBL058W SMD3P43321 101 aaKnown RBP3.97□□□□□ -1.77
SHP1YBL058W MGA1P53050 456 aa3.97□□□□□ -1.77
SHP1YBL058W YPR010C-AA5Z2X5 72 aa3.96□□□□□ -1.78
SHP1YBL058W YCR023CP25351 611 aa3.96□□□□□ -1.78
SHP1YBL058W YCL001W-AP87012 153 aa3.96□□□□□ -1.78
SHP1YBL058W DGA1Q08650 418 aa3.96□□□□□ -1.78
SHP1YBL058W SME1Q12330 94 aaPredicted RBP3.96□□□□□ -1.78
SHP1YBL058W YDR034C-AP0C289 58 aa3.95□□□□□ -1.78
SHP1YBL058W AQY1P0CD91 305 aa3.95□□□□□ -1.78
SHP1YBL058W RPL12AP0CX53 165 aaKnown RBP3.95□□□□□ -1.78
SHP1YBL058W RPL12BP0CX54 165 aa3.95□□□□□ -1.78
SHP1YBL058W YBR090CP38253 122 aa3.95□□□□□ -1.78
SHP1YBL058W YFL067WP43537 175 aa3.95□□□□□ -1.78
SHP1YBL058W UPS3Q04006 179 aa3.95□□□□□ -1.78
SHP1YBL058W FCF1Q05498 189 aaPredicted RBP3.95□□□□□ -1.78
SHP1YBL058W TIM22Q12328 207 aa3.95□□□□□ -1.78
SHP1YBL058W FZF1P32805 299 aa3.94□□□□□ -1.78
SHP1YBL058W PGD1P40356 397 aa3.94□□□□□ -1.78
SHP1YBL058W JAC1P53193 184 aa3.94□□□□□ -1.78
SHP1YBL058W PAU4P53427 120 aa3.94□□□□□ -1.78
SHP1YBL058W DIA1P54005 336 aa3.94□□□□□ -1.78
SHP1YBL058W YDR115WQ04598 105 aa3.94□□□□□ -1.78
SHP1YBL058W SUR2P38992 349 aa3.93□□□□□ -1.78
SHP1YBL058W BET5Q03630 159 aa3.93□□□□□ -1.78
SHP1YBL058W YMR122W-AQ3E842 84 aa3.93□□□□□ -1.78
SHP1YBL058W HOT13P36078 116 aa3.92□□□□□ -1.78
SHP1YBL058W SPC25P40014 221 aa3.92□□□□□ -1.78
SHP1YBL058W YFR045WP43617 309 aa3.92□□□□□ -1.78
SHP1YBL058W ATP19P81451 68 aa3.92□□□□□ -1.78
SHP1YBL058W COX19Q3E731 98 aa3.92□□□□□ -1.78
SHP1YBL058W YJL197C-AP0C5P0 93 aa3.91□□□□□ -1.78
SHP1YBL058W PAU1P0CE88 120 aa3.91□□□□□ -1.78
SHP1YBL058W PAU14P0CE89 120 aa3.91□□□□□ -1.78
SHP1YBL058W PAU6P0CE90 120 aa3.91□□□□□ -1.78
SHP1YBL058W PAU18P0CE91 120 aa3.91□□□□□ -1.78
SHP1YBL058W PAU8P0CE92 120 aa3.91□□□□□ -1.78
SHP1YBL058W PAU11P0CE93 120 aa3.91□□□□□ -1.78
SHP1YBL058W UBC5P15732 148 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms