RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ZSCAN32Q9NX65 697 aa5.84□□□□□ -1.47
USP8-218ENST00000561330 AFF4Q9UHB7 1163 aaKnown RBP5.84□□□□□ -1.47
USP8-218ENST00000561330 ADGRA2Q96PE1 1338 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 RHOP08100 348 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 ZKSCAN1P17029 563 aaPredicted RBP5.83□□□□□ -1.48
USP8-218ENST00000561330 PPIFP30405 207 aaKnown RBP5.83□□□□□ -1.48
USP8-218ENST00000561330 LRPAP1P30533 357 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 RARRES1P49788 294 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 FMO1Q01740 532 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 COL10A1Q03692 680 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 SEMA5AQ13591 1074 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 E2F2Q14209 437 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 MGAT5BQ3V5L5 792 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 CAGE1Q8TC20 777 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 MAML1Q92585 1016 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 NMD3Q96D46 503 aaKnown RBP5.83□□□□□ -1.48
USP8-218ENST00000561330 PDLIM2Q96JY6 352 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 MESP1Q9BRJ9 268 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 ALG8Q9BVK2 526 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 SLITRK6Q9H5Y7 841 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 GEMIN8Q9NWZ8 242 aaKnown RBP5.83□□□□□ -1.48
USP8-218ENST00000561330 STK32BQ9NY57 414 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 FOXJ2Q9P0K8 574 aa5.83□□□□□ -1.48
USP8-218ENST00000561330 TRIM43BA6NCK2 446 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 TMEM233B4DJY2 109 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 ADM5C9JUS6 153 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 PPM1DO15297 605 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 SIM1P81133 766 aaPredicted RBP5.82□□□□□ -1.48
USP8-218ENST00000561330 KRT17Q04695 432 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 TBCCQ15814 346 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 TXNRD1Q16881 649 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 PLA1AQ53H76 456 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 PRR16Q569H4 304 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 DCAF12L1Q5VU92 463 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 RGS7BPQ6MZT1 257 aaPredicted RBP5.82□□□□□ -1.48
USP8-218ENST00000561330 MICU3Q86XE3 530 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 GAS2L3Q86XJ1 694 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 RAPGEF4Q8WZA2 1011 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 TRIM43Q96BQ3 446 aaPredicted RBP5.82□□□□□ -1.48
USP8-218ENST00000561330 NUP62CLQ9H1M0 184 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 DDX21Q9NR30 783 aaKnown RBP eCLIP5.82□□□□□ -1.48
USP8-218ENST00000561330 EHD3Q9NZN3 535 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 ZNHIT2Q9UHR6 403 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 SERTAD3Q9UJW9 196 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 PCDHGB6Q9Y5F9 930 aa5.82□□□□□ -1.48
USP8-218ENST00000561330 WDR27A2RRH5 827 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 VWC2LB2RUY7 222 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 hCG_1984214I3L0E3 225 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 KIAA0355O15063 1070 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 PDHA1P08559 390 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 RPL17P18621 184 aaKnown RBP5.81□□□□□ -1.48
USP8-218ENST00000561330 GRIA3P42263 894 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 MAPK10P53779 464 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 EIF2B5Q13144 721 aaKnown RBP5.81□□□□□ -1.48
USP8-218ENST00000561330 HLTFQ14527 1009 aaKnown RBP eCLIP5.81□□□□□ -1.48
USP8-218ENST00000561330 C3orf38Q5JPI3 329 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 TEDDM1Q5T9Z0 273 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 PEG10Q86TG7 708 aaKnown RBP5.81□□□□□ -1.48
USP8-218ENST00000561330 ZNF280BQ86YH2 543 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 CCAR1Q8IX12 1150 aaKnown RBP5.81□□□□□ -1.48
USP8-218ENST00000561330 ATRIPQ8WXE1 791 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 DUSP26Q9BV47 211 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 SYNPO2LQ9H987 977 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 TLK1Q9UKI8 766 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 NDRG4Q9ULP0 352 aaKnown RBP5.81□□□□□ -1.48
USP8-218ENST00000561330 SSX2IPQ9Y2D8 614 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 MRPS17Q9Y2R5 130 aaKnown RBP5.81□□□□□ -1.48
USP8-218ENST00000561330 INSL6Q9Y581 213 aa5.81□□□□□ -1.48
USP8-218ENST00000561330 MBD3L4A6NDZ8 208 aaPredicted RBP5.8□□□□□ -1.48
USP8-218ENST00000561330 MBD3L3A6NE82 208 aaPredicted RBP5.8□□□□□ -1.48
USP8-218ENST00000561330 PYCARD-AS1I3L0S3 204 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 TLR5O60602 858 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 PQBP1O60828 265 aaKnown RBP5.8□□□□□ -1.48
USP8-218ENST00000561330 NUDT3O95989 172 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 BMP5P22003 454 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 INHBEP58166 350 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 MYO1EQ12965 1108 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 BMPR2Q13873 1038 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 STRIP1Q5VSL9 837 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 DTX2Q86UW9 622 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 SLC15A3Q8IY34 581 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 SIMC1Q8NDZ2 872 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 OR56A3Q8NH54 315 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 SPSB4Q96A44 273 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 ZG16BQ96DA0 208 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 PBKQ96KB5 322 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 SARGQ9BW04 601 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 STK31Q9BXU1 1019 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 BTBD1Q9H0C5 482 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 SERHLQ9NQF3 203 aa5.8□□□□□ -1.48
USP8-218ENST00000561330 ZAR1LA6NP61 321 aa5.79□□□□□ -1.48
USP8-218ENST00000561330 URI1O94763 535 aaPredicted RBP5.79□□□□□ -1.48
USP8-218ENST00000561330 NXPH3O95157 252 aa5.79□□□□□ -1.48
USP8-218ENST00000561330 NR2F6P10588 404 aa5.79□□□□□ -1.48
USP8-218ENST00000561330 ZFXP17010 805 aaPredicted RBP5.79□□□□□ -1.48
USP8-218ENST00000561330 KLRC1P26715 233 aa5.79□□□□□ -1.48
USP8-218ENST00000561330 DGKEP52429 567 aa5.79□□□□□ -1.48
USP8-218ENST00000561330 RPS16P62249 146 aaKnown RBP5.79□□□□□ -1.48
USP8-218ENST00000561330 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
USP8-218ENST00000561330 PLAC9Q5JTB6 97 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms