RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 SOX9P48436 509 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 CASP4P49662 377 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 NDUFA8P51970 172 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 PSMD2Q13200 908 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 FAM171BQ6P995 826 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 CMTM8Q8IZV2 173 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 MAB21L3Q8N8X9 362 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 GOLGA5Q8TBA6 731 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 CSGALNACT1Q8TDX6 532 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 FAM3CQ92520 227 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 MYLPFQ96A32 169 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 TRMT2BQ96GJ1 504 aaKnown RBP9.66□□□□□ -0.86
USF1-204ENST00000472217 FUBP3Q96I24 572 aaKnown RBP eCLIP9.66□□□□□ -0.86
USF1-204ENST00000472217 ZFYVE19Q96K21 471 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 MMS19Q96T76 1030 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 MRPL45Q9BRJ2 306 aaKnown RBP9.66□□□□□ -0.86
USF1-204ENST00000472217 KCTD10Q9H3F6 313 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 OBP2AQ9NY56 170 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 CDH9Q9ULB4 789 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 NME7Q9Y5B8 376 aa9.66□□□□□ -0.86
USF1-204ENST00000472217 FAM237AA0A1B0GTK4 181 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 LRRIQ3A6PVS8 624 aaPredicted RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 TACC1O75410 805 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 RPN1P04843 607 aaKnown RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 MYL1P05976 194 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 PDGFRBP09619 1106 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 CCNE1P24864 410 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 AVPR1AP37288 418 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 MAGEA11P43364 429 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 KPNA1P52294 538 aaPredicted RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 MLLT6P55198 1093 aaPredicted RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 MYL6P60660 151 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 MTAPQ13126 283 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 ZNF528Q3MIS6 628 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 WDR72Q3MJ13 1102 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 ARHGAP29Q52LW3 1261 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 TDRD10Q5VZ19 366 aaKnown RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 TXNDC8Q6A555 127 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 ZC3H14Q6PJT7 736 aaKnown RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 C4orf50Q6ZRC1 276 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 SCN4BQ8IWT1 228 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 CELF5Q8N6W0 485 aaKnown RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 TTC8Q8TAM2 541 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 BPIFB1Q8TDL5 484 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 PARD3BQ8TEW8 1205 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 MRPS31Q92665 395 aaKnown RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 USP13Q92995 863 aaPredicted RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 MYRFLQ96LU7 910 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 SCAND2PQ9GZW5 306 aaPredicted RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 XYLT2Q9H1B5 865 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 GOLPH3LQ9H4A5 285 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 DMAC2Q9NW81 257 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 GTSE1Q9NYZ3 720 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 MAGEC2Q9UBF1 373 aaPredicted RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 UXTQ9UBK9 157 aaPredicted RBP9.65□□□□□ -0.86
USF1-204ENST00000472217 ZMYM5Q9UJ78 669 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 FBXO4Q9UKT5 387 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 CCL26Q9Y258 94 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 ATP6V1DQ9Y5K8 247 aa9.65□□□□□ -0.86
USF1-204ENST00000472217 PTPRDP23468 1912 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 A0A1W2PQ27 194 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 A0A1W2PQ64 194 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 A0A1W2PQD8 194 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 SPECC1L-ADORA2AF8WAN1 911 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 PDXKO00764 312 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 PHACTR2O75167 634 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 STAU1O95793 577 aaKnown RBP9.64□□□□□ -0.87
USF1-204ENST00000472217 NR3C1P04150 777 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 BDNFP23560 247 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 DDX6P26196 483 aaKnown RBP eCLIP9.64□□□□□ -0.87
USF1-204ENST00000472217 ATICP31939 592 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 CTHP32929 405 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 GNL1P36915 607 aaPredicted RBP9.64□□□□□ -0.87
USF1-204ENST00000472217 TNNC1P63316 161 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 DLG4P78352 724 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 CLDN10P78369 228 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 PLCB2Q00722 1185 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 CYP27A1Q02318 531 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 CSTF1Q05048 431 aaKnown RBP9.64□□□□□ -0.87
USF1-204ENST00000472217 TNK2Q07912 1038 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 DPYDQ12882 1025 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 BIRC3Q13489 604 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 TRPC3Q13507 836 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 MAPRE1Q15691 268 aaKnown RBP9.64□□□□□ -0.87
USF1-204ENST00000472217 MDH1BQ5I0G3 518 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 WDR44Q5JSH3 913 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 TXNDC11Q6PKC3 985 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 VSTM1Q6UX27 236 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 KRBA2Q6ZNG9 492 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 MON1AQ86VX9 555 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 SLC9A9Q8IVB4 645 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 ADSSL1Q8N142 457 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 FSIP1Q8NA03 581 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 RIN3Q8TB24 985 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 MYCBPAPQ8TBZ2 947 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 TMEM174Q8WUU8 243 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 SYAP1Q96A49 352 aaPredicted RBP9.64□□□□□ -0.87
USF1-204ENST00000472217 MSANTD3Q96H12 275 aa9.64□□□□□ -0.87
USF1-204ENST00000472217 PCED1BQ96HM7 432 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms