RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PLAGL2Q9UPG8 496 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 NOC2LQ9Y3T9 749 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 ATP7AQ04656 1500 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ZNF335Q9H4Z2 1342 aaPredicted RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 PNMA6FA0A0J9YX94 578 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 KCNK3O14649 394 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 SLC9A3R1O14745 358 aaPredicted RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 ZNF263O14978 683 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 BUB1O43683 1085 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 MAN1A2O60476 641 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 JRKO75564 520 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PDE6AP16499 860 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 RPA1P27694 616 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PRKCIP41743 596 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 YWHAGP61981 247 aaKnown RBP eCLIP8.98□□□□□ -0.97
TDP1-201ENST00000335725 CREB5Q02930 508 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 EHHADHQ08426 723 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 COL9A3Q14050 684 aaPredicted RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 SNX17Q15036 470 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 VSTM1Q6UX27 236 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 RGS9BPQ6ZS82 235 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PROSER2Q86WR7 435 aaPredicted RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 UNC45BQ8IWX7 931 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 C10orf82Q8WW14 230 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 OSBPL8Q9BZF1 889 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 C17orf75Q9HAS0 396 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ZC4H2Q9NQZ6 224 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 DBR1Q9UK59 544 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 ANGEL1Q9UNK9 670 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 RTCBQ9Y3I0 505 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 AP4S1Q9Y587 144 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 QRICH2Q9H0J4 1663 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 POTEB3A0JP26 581 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 FAM187AA6NFU0 413 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 SHOXO15266 292 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PDPK1O15530 556 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 HOXC11O43248 304 aaPredicted RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 C8BP07358 591 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PON1P27169 355 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 MAN1A1P33908 653 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 MTIF2P46199 727 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 SLCO1A2P46721 670 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 AP2S1P53680 142 aaPredicted RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 NFIAQ12857 509 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PPM1LQ5SGD2 360 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 RRAGBQ5VZM2 374 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 FAM205BPQ63HN1 556 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 TYW1BQ6NUM6 668 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 POTEBQ6S5H4 581 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ZNF677Q86XU0 584 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ZNF507Q8TCN5 953 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 MTBPQ96DY7 904 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 PTCD3Q96EY7 689 aaKnown RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 CDCA7Q9BWT1 371 aaPredicted RBP8.98□□□□□ -0.97
TDP1-201ENST00000335725 DTNAQ9Y4J8 743 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 ACTL7BQ9Y614 415 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 GJA3Q9Y6H8 435 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 NEURL4Q96JN8 1562 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 MST1RQ04912 1400 aa8.98□□□□□ -0.97
TDP1-201ENST00000335725 CDC42BPGQ6DT37 1551 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 CLRN2A0PK11 232 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 APOL1O14791 398 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 ASNA1O43681 348 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TAF5LO75529 589 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 HMGN1P05114 100 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 SRGAP2CP0DJJ0 459 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 SRGAP2BP0DMP2 458 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 DRG2P55039 364 aaKnown RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 TTBK2Q6IQ55 1244 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 UNC5DQ6UXZ4 953 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 EPM2AIP1Q7L775 607 aaPredicted RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 MTDHQ86UE4 582 aaKnown RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 FAM83AQ86UY5 434 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 KSR1Q8IVT5 923 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 MTMR8Q96EF0 704 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 C1orf50Q9BV19 199 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TTYH3Q9C0H2 523 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 ATP13A3Q9H7F0 1226 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 AGPAT5Q9NUQ2 364 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TAS2R1Q9NYW7 299 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 ZC3H7BQ9UGR2 993 aaKnown RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 TOPBP1Q92547 1522 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 SOS2Q07890 1332 aaPredicted RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 ADGRA3Q8IWK6 1321 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 A6NL46 340 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 GSTM2P28161 218 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 TTKP33981 857 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 EIF4A3P38919 411 aaKnown RBP8.97□□□□□ -0.97
TDP1-201ENST00000335725 ALDH3B2P48448 385 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 PEX3P56589 373 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 ZBTB16Q05516 673 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 SLC39A6Q13433 755 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 CLUL1Q15846 466 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 GRAMD1BQ3KR37 738 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 CAVIN4Q5BKX8 364 aa8.97□□□□□ -0.97
TDP1-201ENST00000335725 HABP4Q5JVS0 413 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms