RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 YGL014C-AP0C5N1 53 aa-0.5□□□□□ -2.49
snR54snR54 YGL041W-AP0C5N3 154 aa-0.5□□□□□ -2.49
snR54snR54 TRR1P29509 319 aaKnown RBP-0.5□□□□□ -2.49
snR54snR54 IRC21Q04772 201 aa-0.5□□□□□ -2.49
snR54snR54 FAS2P19097 1887 aaKnown RBP-0.5□□□□□ -2.49
snR54snR54 MYO1P08964 1928 aa-0.51□□□□□ -2.49
snR54snR54 HSK3P69852 69 aa-0.51□□□□□ -2.49
snR54snR54 GPI11Q06636 219 aa-0.51□□□□□ -2.49
snR54snR54 IRC19Q07843 230 aa-0.51□□□□□ -2.49
snR54snR54 CWC21Q03375 135 aaKnown RBP-0.52□□□□□ -2.49
snR54snR54 FIT3Q08907 204 aa-0.52□□□□□ -2.49
snR54snR54 YLR046CQ12253 270 aa-0.52□□□□□ -2.49
snR54snR54 COA6Q3E846 104 aa-0.52□□□□□ -2.49
snR54snR54 PLP1Q04004 230 aa-0.53□□□□□ -2.49
snR54snR54 YPR153WQ06537 140 aa-0.53□□□□□ -2.49
snR54snR54 ATP5P09457 212 aa-0.54□□□□□ -2.5
snR54snR54 PHO13P19881 312 aa-0.54□□□□□ -2.5
snR54snR54 FES1P38260 290 aa-0.54□□□□□ -2.5
snR54snR54 EST3Q03096 181 aa-0.54□□□□□ -2.5
snR54snR54 YMR122CQ03879 124 aa-0.54□□□□□ -2.5
snR54snR54 RFU1Q08003 200 aa-0.54□□□□□ -2.5
snR54snR54 RAD51P25454 400 aa-0.55□□□□□ -2.5
snR54snR54 PEX34P25584 144 aa-0.55□□□□□ -2.5
snR54snR54 ATP7P30902 174 aa-0.55□□□□□ -2.5
snR54snR54 SRP21P32342 167 aa-0.55□□□□□ -2.5
snR54snR54 BRR2P32639 2163 aaKnown RBP-0.56□□□□□ -2.5
snR54snR54 NHP6AP11632 93 aaKnown RBP-0.56□□□□□ -2.5
snR54snR54 YIP3P53633 176 aa-0.56□□□□□ -2.5
snR54snR54 YLR050CQ12155 161 aaKnown RBP-0.56□□□□□ -2.5
snR54snR54 SRL3P36167 246 aa-0.57□□□□□ -2.5
snR54snR54 ORM1P53224 222 aa-0.57□□□□□ -2.5
snR54snR54 CMD1P06787 147 aaKnown RBP-0.58□□□□□ -2.5
snR54snR54 YNL140CP53910 189 aa-0.58□□□□□ -2.5
snR54snR54 TY4B-JP47024 1803 aa-0.59□□□□□ -2.5
snR54snR54 YGL101WP53144 215 aa-0.59□□□□□ -2.5
snR54snR54 MHF1Q3E835 90 aa-0.59□□□□□ -2.5
snR54snR54 IPI1P38803 334 aaPredicted RBP-0.6□□□□□ -2.51
snR54snR54 SRP14P38985 146 aa-0.6□□□□□ -2.51
snR54snR54 SEC72P39742 193 aaKnown RBP-0.6□□□□□ -2.51
snR54snR54 LST8P41318 303 aa-0.6□□□□□ -2.51
snR54snR54 YGL193CP53097 103 aa-0.6□□□□□ -2.51
snR54snR54 TMA20P89886 181 aaPredicted RBP-0.6□□□□□ -2.51
snR54snR54 SEC16P48415 2195 aaKnown RBP-0.6□□□□□ -2.51
snR54snR54 GPI2P46961 280 aa-0.61□□□□□ -2.51
snR54snR54 COA4Q05809 96 aa-0.61□□□□□ -2.51
snR54snR54 TY1B-HO13535 1793 aa-0.62□□□□□ -2.51
snR54snR54 COX5BP00425 151 aa-0.62□□□□□ -2.51
snR54snR54 YRF1-3P0CX14 1859 aa-0.63□□□□□ -2.51
snR54snR54 YRF1-7P0CX15 1859 aa-0.63□□□□□ -2.51
snR54snR54 UBI4P0CG63 381 aaKnown RBP-0.63□□□□□ -2.51
snR54snR54 RPL30P14120 105 aaKnown RBP-0.63□□□□□ -2.51
snR54snR54 YBR013CP38215 129 aa-0.63□□□□□ -2.51
snR54snR54 FIP1P45976 327 aa-0.63□□□□□ -2.51
snR54snR54 EMC4P53073 190 aa-0.63□□□□□ -2.51
snR54snR54 LSM3P57743 89 aaKnown RBP-0.63□□□□□ -2.51
snR54snR54 KTI11Q3E840 82 aa-0.64□□□□□ -2.51
snR54snR54 MRPL24P36525 258 aaPredicted RBP-0.65□□□□□ -2.51
snR54snR54 YNL019CP53975 284 aa-0.65□□□□□ -2.51
snR54snR54 ATP19P81451 68 aa-0.65□□□□□ -2.51
snR54snR54 HUT1Q12520 339 aa-0.65□□□□□ -2.51
snR54snR54 POL2P21951 2222 aaKnown RBP-0.66□□□□□ -2.51
snR54snR54 NMT1P14743 455 aa-0.66□□□□□ -2.52
snR54snR54 AIM4P38305 123 aaPredicted RBP-0.66□□□□□ -2.52
snR54snR54 YJL218WP40892 196 aaKnown RBP-0.66□□□□□ -2.52
snR54snR54 MIC27P50945 234 aa-0.66□□□□□ -2.52
snR54snR54 SCS22Q6Q595 175 aa-0.66□□□□□ -2.52
snR54snR54 YHR213WP0CI67 198 aa-0.67□□□□□ -2.52
snR54snR54 AUA1P32450 94 aa-0.67□□□□□ -2.52
snR54snR54 DLS1P40366 167 aa-0.67□□□□□ -2.52
snR54snR54 RPL40AP0CH08 128 aaKnown RBP-0.68□□□□□ -2.52
snR54snR54 RPL40BP0CH09 128 aaKnown RBP-0.68□□□□□ -2.52
snR54snR54 DDR48P18899 430 aaKnown RBP-0.68□□□□□ -2.52
snR54snR54 YLR194CQ05777 254 aa-0.68□□□□□ -2.52
snR54snR54 RRT7Q07829 113 aa-0.68□□□□□ -2.52
snR54snR54 FYV5P25585 152 aa-0.69□□□□□ -2.52
snR54snR54 VMA10P48836 114 aaKnown RBP-0.69□□□□□ -2.52
snR54snR54 YPR202WQ08993 238 aa-0.69□□□□□ -2.52
snR54snR54 SAC3P46674 1301 aa-0.69□□□□□ -2.52
snR54snR54 RPL35AP0CX84 120 aaKnown RBP-0.7□□□□□ -2.52
snR54snR54 RPL35BP0CX85 120 aaKnown RBP-0.7□□□□□ -2.52
snR54snR54 YER181CP40097 107 aa-0.7□□□□□ -2.52
snR54snR54 YCL001W-AP87012 153 aa-0.7□□□□□ -2.52
snR54snR54 GRX3Q03835 250 aa-0.7□□□□□ -2.52
snR54snR54 FUN14P18411 198 aa-0.71□□□□□ -2.52
snR54snR54 RME1P32338 300 aaKnown RBP-0.71□□□□□ -2.52
snR54snR54 EGD2P38879 174 aaKnown RBP-0.71□□□□□ -2.52
snR54snR54 POR2P40478 281 aa-0.71□□□□□ -2.52
snR54snR54 GIM3P53900 129 aa-0.71□□□□□ -2.52
snR54snR54 ANB1P19211 157 aa-0.72□□□□□ -2.52
snR54snR54 UTP11P34247 250 aaPredicted RBP-0.72□□□□□ -2.52
snR54snR54 YER121WP40076 114 aa-0.72□□□□□ -2.52
snR54snR54 APQ12P40532 138 aa-0.72□□□□□ -2.52
snR54snR54 RDI1Q12434 202 aa-0.72□□□□□ -2.52
snR54snR54 YPD1Q07688 167 aa-0.73□□□□□ -2.53
snR54snR54 RPS1BP23248 255 aaKnown RBP-0.74□□□□□ -2.53
snR54snR54 YJR128WP47162 119 aa-0.74□□□□□ -2.53
snR54snR54 YSF3P0C074 85 aaPredicted RBP-0.75□□□□□ -2.53
snR54snR54 MRPL31P14063 131 aaPredicted RBP-0.75□□□□□ -2.53
snR54snR54 YFR035CP43608 114 aa-0.75□□□□□ -2.53
snR54snR54 YDR476CQ03362 224 aa-0.75□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 105.6 ms