RNA–Protein interactions for RNA: snR14

snR14, Transcript of U4 spliceosomal RNA (U4 snRNA), yeast

Gene snR14, Length 160 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR14	snR14	TAH1	P25638	111 aa	Predicted RBP	0.78	□□□□□ -2.28
snR14	snR14	SPS18	P32572	300 aa		0.78	□□□□□ -2.28
snR14	snR14	UGX2	P32772	223 aa		0.78	□□□□□ -2.28
snR14	snR14	EMP24	P32803	203 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	ATG8	P38182	117 aa	RIP-Chip data	0.78	□□□□□ -2.28	not detected
snR14	snR14	PRS3	P38689	320 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	SRP14	P38985	146 aa		0.78	□□□□□ -2.28
snR14	snR14	YER076C	P40049	302 aa		0.78	□□□□□ -2.28
snR14	snR14	CUP9	P41817	306 aa		0.78	□□□□□ -2.28
snR14	snR14	GLR1	P41921	483 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	GPI14	P47088	403 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	MOG1	P47123	218 aa		0.78	□□□□□ -2.28
snR14	snR14	EAF6	P47128	113 aa		0.78	□□□□□ -2.28
snR14	snR14	YGL101W	P53144	215 aa		0.78	□□□□□ -2.28
snR14	snR14	YGR017W	P53210	297 aa		0.78	□□□□□ -2.28
snR14	snR14	TIM13	P53299	105 aa		0.78	□□□□□ -2.28
snR14	snR14	MPA43	P53583	542 aa	Predicted RBP	0.78	□□□□□ -2.28
snR14	snR14	YDR366C	P87287	132 aa		0.78	□□□□□ -2.28
snR14	snR14	UBC7	Q02159	165 aa		0.78	□□□□□ -2.28
snR14	snR14	DYN2	Q02647	92 aa		0.78	□□□□□ -2.28
snR14	snR14	PET191	Q02772	108 aa		0.78	□□□□□ -2.28
snR14	snR14	SNO1	Q03144	224 aa		0.78	□□□□□ -2.28
snR14	snR14	DIG2	Q03373	323 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	VPS71	Q03433	280 aa		0.78	□□□□□ -2.28
snR14	snR14	UPS3	Q04006	179 aa		0.78	□□□□□ -2.28
snR14	snR14	YDR391C	Q04170	232 aa		0.78	□□□□□ -2.28
snR14	snR14	PRP11	Q07350	266 aa	Predicted RBP	0.78	□□□□□ -2.28
snR14	snR14	ATG10	Q07879	167 aa		0.78	□□□□□ -2.28
snR14	snR14	YGL194C-A	Q2V2P6	80 aa		0.78	□□□□□ -2.28
snR14	snR14	YIR021W-A	Q3E739	70 aa		0.78	□□□□□ -2.28
snR14	snR14	SLO1	Q3E784	85 aa		0.78	□□□□□ -2.28
snR14	snR14	YNR034W-A	Q3E841	98 aa		0.78	□□□□□ -2.28
snR14	snR14	YFR032C-B	Q8TGU2	87 aa		0.78	□□□□□ -2.28
snR14	snR14	RIB3	Q99258	208 aa		0.78	□□□□□ -2.28
snR14	snR14	ACC1	Q00955	2233 aa	Known RBP	0.78	□□□□□ -2.28
snR14	snR14	SSK2	P53599	1579 aa		0.78	□□□□□ -2.29
snR14	snR14	VAR1	P02381	398 aa		0.77	□□□□□ -2.29
snR14	snR14	POR1	P04840	283 aa	Known RBP	0.77	□□□□□ -2.29
snR14	snR14	HAP3	P13434	144 aa		0.77	□□□□□ -2.29
snR14	snR14	YCR023C	P25351	611 aa		0.77	□□□□□ -2.29
snR14	snR14	STP22	P25604	385 aa		0.77	□□□□□ -2.29
snR14	snR14	ADE1	P27616	306 aa		0.77	□□□□□ -2.29
snR14	snR14	UBC8	P28263	218 aa		0.77	□□□□□ -2.29
snR14	snR14	MRPL24	P36525	258 aa	Predicted RBP	0.77	□□□□□ -2.29
snR14	snR14	YEA6	P39953	335 aa		0.77	□□□□□ -2.29
snR14	snR14	SNU13	P39990	126 aa	Known RBP	0.77	□□□□□ -2.29
snR14	snR14	NSA2	P40078	261 aa	Known RBP	0.77	□□□□□ -2.29
snR14	snR14	POG1	P40473	351 aa		0.77	□□□□□ -2.29
snR14	snR14	VMA21	P41806	77 aa		0.77	□□□□□ -2.29
snR14	snR14	YNR077C	P53758	84 aa		0.77	□□□□□ -2.29
snR14	snR14	YNL140C	P53910	189 aa		0.77	□□□□□ -2.29
snR14	snR14	APS2	Q00381	147 aa		0.77	□□□□□ -2.29
snR14	snR14	YPL067C	Q02754	198 aa		0.77	□□□□□ -2.29
snR14	snR14	VPS28	Q02767	242 aa		0.77	□□□□□ -2.29
snR14	snR14	MAK3	Q03503	176 aa		0.77	□□□□□ -2.29
snR14	snR14	TMA23	Q03525	211 aa		0.77	□□□□□ -2.29
snR14	snR14	AIM34	Q03673	198 aa		0.77	□□□□□ -2.29
snR14	snR14	PKR1	Q03880	122 aa	Known RBP	0.77	□□□□□ -2.29
snR14	snR14	SDH7	Q04401	133 aa		0.77	□□□□□ -2.29
snR14	snR14	SEN15	Q04675	128 aa		0.77	□□□□□ -2.29
snR14	snR14	SHH4	Q06236	168 aa		0.77	□□□□□ -2.29
snR14	snR14	CSI2	Q08054	341 aa		0.77	□□□□□ -2.29
snR14	snR14	YOL131W	Q08270	108 aa		0.77	□□□□□ -2.29
snR14	snR14	NAT5	Q08689	176 aa		0.77	□□□□□ -2.29
snR14	snR14	YLR050C	Q12155	161 aa	Known RBP	0.77	□□□□□ -2.29
snR14	snR14	PST2	Q12335	198 aa	Known RBP	0.77	□□□□□ -2.29
snR14	snR14	YLR099W-A	Q3E798	87 aa		0.77	□□□□□ -2.29
snR14	snR14	VMA9	Q3E7B6	73 aa		0.77	□□□□□ -2.29
snR14	snR14	YNL146C-A	Q3E7Z1	64 aa		0.77	□□□□□ -2.29
snR14	snR14	YCR075W-A	Q3E830	75 aa		0.77	□□□□□ -2.29
snR14	snR14	COA6	Q3E846	104 aa		0.77	□□□□□ -2.29
snR14	snR14	YIL134C-A	Q45U18	67 aa		0.77	□□□□□ -2.29
snR14	snR14	YCL012C	Q8J0M4	134 aa		0.77	□□□□□ -2.29
snR14	snR14	YHR214C-E	Q8TGK0	99 aa		0.77	□□□□□ -2.29
snR14	snR14	IGO2	Q9P305	131 aa		0.77	□□□□□ -2.29
snR14	snR14	FLO9	P39712	1322 aa		0.77	□□□□□ -2.29
snR14	snR14	POL1	P13382	1468 aa		0.77	□□□□□ -2.29
snR14	snR14	PDR12	Q02785	1511 aa		0.77	□□□□□ -2.29
snR14	snR14	SWR1	Q05471	1514 aa		0.77	□□□□□ -2.29
snR14	snR14	MYO2	P19524	1574 aa	Known RBP	0.77	□□□□□ -2.29
snR14	snR14	HIR3	P47171	1648 aa		0.76	□□□□□ -2.29
snR14	snR14	ATG2	P53855	1592 aa		0.76	□□□□□ -2.29
snR14	snR14	SNQ2	P32568	1501 aa	Known RBP	0.76	□□□□□ -2.29
snR14	snR14	YCF1	P39109	1515 aa	Known RBP	0.76	□□□□□ -2.29
snR14	snR14	QCR8	P08525	94 aa		0.76	□□□□□ -2.29
snR14	snR14	TIR1	P10863	254 aa		0.76	□□□□□ -2.29
snR14	snR14	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.76	□□□□□ -2.29	not detected
snR14	snR14	PEX34	P25584	144 aa		0.76	□□□□□ -2.29
snR14	snR14	MRP17	P28778	131 aa		0.76	□□□□□ -2.29
snR14	snR14	RPB7	P34087	171 aa		0.76	□□□□□ -2.29
snR14	snR14	LSM2	P38203	95 aa	Known RBP	0.76	□□□□□ -2.29
snR14	snR14	SWM2	P40342	146 aa		0.76	□□□□□ -2.29
snR14	snR14	YJL218W	P40892	196 aa	Known RBP	0.76	□□□□□ -2.29
snR14	snR14	YJR015W	P47090	510 aa		0.76	□□□□□ -2.29
snR14	snR14	MPC1	P53157	130 aa	Known RBP	0.76	□□□□□ -2.29
snR14	snR14	THG1	P53215	237 aa	Known RBP	0.76	□□□□□ -2.29
snR14	snR14	YNL033W	P53964	284 aa		0.76	□□□□□ -2.29
snR14	snR14	YNL019C	P53975	284 aa		0.76	□□□□□ -2.29
snR14	snR14	TIM8	P57744	87 aa		0.76	□□□□□ -2.29
snR14	snR14	AVO2	Q04749	426 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms