RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W YFL012WP43580 148 aa1.19□□□□□ -2.22
SKI3YPR189W YGR219WP53307 113 aa1.19□□□□□ -2.22
SKI3YPR189W SMD1Q02260 146 aaPredicted RBP1.19□□□□□ -2.22
SKI3YPR189W DIG2Q03373 323 aaKnown RBP1.19□□□□□ -2.22
SKI3YPR189W YEL045CP32616 141 aa1.19□□□□□ -2.22
SKI3YPR189W ATP14Q12349 124 aa1.19□□□□□ -2.22
SKI3YPR189W TIM9O74700 87 aa1.18□□□□□ -2.22
SKI3YPR189W RAD10P06838 210 aa1.18□□□□□ -2.22
SKI3YPR189W YHR214C-DP0CX93 97 aa1.18□□□□□ -2.22
SKI3YPR189W SDH4P37298 181 aa1.18□□□□□ -2.22
SKI3YPR189W RPS20P38701 121 aaKnown RBP1.18□□□□□ -2.22
SKI3YPR189W YHR125WP38831 101 aa1.18□□□□□ -2.22
SKI3YPR189W PRE5P40302 234 aaKnown RBP1.18□□□□□ -2.22
SKI3YPR189W SMD3P43321 101 aaKnown RBP1.18□□□□□ -2.22
SKI3YPR189W YDR366CP87287 132 aa1.18□□□□□ -2.22
SKI3YPR189W ARL3Q02804 198 aa1.18□□□□□ -2.22
SKI3YPR189W YDR114CQ04597 100 aa1.18□□□□□ -2.22
SKI3YPR189W YLR412C-AQ3E742 68 aa1.18□□□□□ -2.22
SKI3YPR189W YOR304C-AO14468 76 aa1.18□□□□□ -2.22
SKI3YPR189W CBP6P07253 162 aaPredicted RBP1.18□□□□□ -2.22
SKI3YPR189W ATP5P09457 212 aa1.18□□□□□ -2.22
SKI3YPR189W SPT14P32363 452 aa1.18□□□□□ -2.22
SKI3YPR189W TVP23P38962 199 aa1.18□□□□□ -2.22
SKI3YPR189W FCY21P40039 528 aa1.18□□□□□ -2.22
SKI3YPR189W YER181CP40097 107 aa1.18□□□□□ -2.22
SKI3YPR189W SLM2P53955 656 aa1.18□□□□□ -2.22
SKI3YPR189W VPS71Q03433 280 aa1.18□□□□□ -2.22
SKI3YPR189W SDH7Q04401 133 aa1.18□□□□□ -2.22
SKI3YPR189W NKP2Q06162 153 aa1.18□□□□□ -2.22
SKI3YPR189W FYV12Q08559 129 aa1.18□□□□□ -2.22
SKI3YPR189W YIL046W-AQ3E7Z4 54 aa1.18□□□□□ -2.22
SKI3YPR189W RPC19P28000 142 aaKnown RBP1.18□□□□□ -2.22
SKI3YPR189W MRP49P32388 137 aa1.18□□□□□ -2.22
SKI3YPR189W SHE2P36068 246 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SKI3YPR189W PAN3P36102 679 aaPredicted RBP1.18□□□□□ -2.22
SKI3YPR189W MRPL17P36528 281 aa1.18□□□□□ -2.22
SKI3YPR189W YJL218WP40892 196 aaKnown RBP1.18□□□□□ -2.22
SKI3YPR189W ERJ5P43613 295 aaPredicted RBP1.18□□□□□ -2.22
SKI3YPR189W ALB1P47019 175 aaPredicted RBP1.18□□□□□ -2.22
SKI3YPR189W YDR274CP87283 123 aa1.18□□□□□ -2.22
SKI3YPR189W RUB1Q03919 77 aa1.18□□□□□ -2.22
SKI3YPR189W CNL1Q06333 122 aa1.18□□□□□ -2.22
SKI3YPR189W LAA1P39526 2014 aa1.18□□□□□ -2.22
SKI3YPR189W YAR023CD6VPM8 179 aa1.18□□□□□ -2.22
SKI3YPR189W YKR032WP36127 104 aa1.18□□□□□ -2.22
SKI3YPR189W ECM31P38122 312 aa1.18□□□□□ -2.22
SKI3YPR189W PGD1P40356 397 aa1.18□□□□□ -2.22
SKI3YPR189W ARC15P40518 154 aaRIP-Chip data1.18□□□□□ -2.22not detected
SKI3YPR189W YGR039WP53225 103 aa1.18□□□□□ -2.22
SKI3YPR189W HHO1P53551 258 aa1.18□□□□□ -2.22
SKI3YPR189W SPG3Q04398 127 aaPredicted RBP1.18□□□□□ -2.22
SKI3YPR189W LDB18Q07887 179 aa1.18□□□□□ -2.22
SKI3YPR189W PTC1P35182 281 aa1.17□□□□□ -2.22
SKI3YPR189W MRPS9P38120 278 aa1.17□□□□□ -2.22
SKI3YPR189W VMA7P39111 118 aa1.17□□□□□ -2.22
SKI3YPR189W YER134CP40081 178 aa1.17□□□□□ -2.22
SKI3YPR189W YFR045WP43617 309 aa1.17□□□□□ -2.22
SKI3YPR189W CGI121Q03705 181 aaKnown RBP1.17□□□□□ -2.22
SKI3YPR189W PRP11Q07350 266 aaPredicted RBP1.17□□□□□ -2.22
SKI3YPR189W VPS68Q12016 184 aa1.17□□□□□ -2.22
SKI3YPR189W YLR099W-AQ3E798 87 aa1.17□□□□□ -2.22
SKI3YPR189W TIR1P10863 254 aa1.17□□□□□ -2.22
SKI3YPR189W GON7P46984 123 aa1.17□□□□□ -2.22
SKI3YPR189W YMR099CQ03161 297 aaKnown RBP1.17□□□□□ -2.22
SKI3YPR189W PIN3Q06449 215 aa1.17□□□□□ -2.22
SKI3YPR189W YOR268CQ08734 132 aa1.17□□□□□ -2.22
SKI3YPR189W YOR214CQ12282 236 aa1.17□□□□□ -2.22
SKI3YPR189W ODC2Q99297 307 aa1.17□□□□□ -2.22
SKI3YPR189W YHR032W-AP0C5N6 59 aa1.17□□□□□ -2.22
SKI3YPR189W LHP1P33399 275 aaKnown RBP1.17□□□□□ -2.22
SKI3YPR189W MRPL24P36525 258 aaPredicted RBP1.17□□□□□ -2.22
SKI3YPR189W GAL83Q04739 417 aa1.17□□□□□ -2.22
SKI3YPR189W TMC1Q08422 150 aaPredicted RBP1.17□□□□□ -2.22
SKI3YPR189W FMP49A0A023PZB3 126 aa1.16□□□□□ -2.22
SKI3YPR189W HIS3P06633 220 aa1.16□□□□□ -2.22
SKI3YPR189W NSP1P14907 823 aaKnown RBP1.16□□□□□ -2.22
SKI3YPR189W TFC1P32367 649 aa1.16□□□□□ -2.22
SKI3YPR189W UTP11P34247 250 aaPredicted RBP1.16□□□□□ -2.22
SKI3YPR189W SHB17P36136 271 aaKnown RBP1.16□□□□□ -2.22
SKI3YPR189W YHR140WP38842 239 aa1.16□□□□□ -2.22
SKI3YPR189W GVP36P40531 326 aaKnown RBP1.16□□□□□ -2.22
SKI3YPR189W YGL193CP53097 103 aa1.16□□□□□ -2.22
SKI3YPR189W YGR026WP53217 278 aa1.16□□□□□ -2.22
SKI3YPR189W TIM13P53299 105 aa1.16□□□□□ -2.22
SKI3YPR189W CMC4Q3E7A9 73 aa1.16□□□□□ -2.22
SKI3YPR189W SRP21P32342 167 aa1.16□□□□□ -2.22
SKI3YPR189W YKR070WP36151 352 aaKnown RBP1.16□□□□□ -2.22
SKI3YPR189W YBR220CP38318 560 aa1.16□□□□□ -2.22
SKI3YPR189W GPI2P46961 280 aa1.16□□□□□ -2.22
SKI3YPR189W DSK2P48510 373 aa1.16□□□□□ -2.22
SKI3YPR189W RPS12P48589 143 aaKnown RBP1.16□□□□□ -2.22
SKI3YPR189W AIF1P52923 378 aa1.16□□□□□ -2.22
SKI3YPR189W SCW10Q04951 389 aa1.16□□□□□ -2.22
SKI3YPR189W SPC3Q12133 184 aa1.16□□□□□ -2.22
SKI3YPR189W POR1P04840 283 aaKnown RBP1.16□□□□□ -2.22
SKI3YPR189W ADK1P07170 222 aaKnown RBP1.16□□□□□ -2.22
SKI3YPR189W HSP26P15992 214 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
SKI3YPR189W MPC3P53311 146 aa1.16□□□□□ -2.22
SKI3YPR189W APS2Q00381 147 aa1.16□□□□□ -2.22
SKI3YPR189W FCY1Q12178 158 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms