RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C LPP1Q04396 274 aa1.35□□□□□ -2.19
ATG11YPR049C ASR1Q06834 288 aa1.35□□□□□ -2.19
ATG11YPR049C PST2Q12335 198 aaKnown RBP1.35□□□□□ -2.19
ATG11YPR049C ATG31Q12421 196 aa1.35□□□□□ -2.19
ATG11YPR049C YPR108W-AQ3E7B3 70 aa1.35□□□□□ -2.19
ATG11YPR049C MRPL44P19956 98 aa1.35□□□□□ -2.19
ATG11YPR049C YCR007CP25354 239 aa1.35□□□□□ -2.19
ATG11YPR049C SPT14P32363 452 aa1.35□□□□□ -2.19
ATG11YPR049C SHE2P36068 246 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
ATG11YPR049C ERG28P40030 148 aa1.35□□□□□ -2.19
ATG11YPR049C PGD1P40356 397 aa1.35□□□□□ -2.19
ATG11YPR049C MMS2P53152 137 aa1.35□□□□□ -2.19
ATG11YPR049C YPL080CQ02826 108 aa1.35□□□□□ -2.19
ATG11YPR049C ATG40Q99325 256 aa1.35□□□□□ -2.19
ATG11YPR049C CDC7P06243 507 aa1.35□□□□□ -2.19
ATG11YPR049C DDI2P0CH63 225 aa1.35□□□□□ -2.19
ATG11YPR049C DDI3P0CH64 225 aa1.35□□□□□ -2.19
ATG11YPR049C FCY2P17064 533 aa1.35□□□□□ -2.19
ATG11YPR049C HYP2P23301 157 aaKnown RBP1.35□□□□□ -2.19
ATG11YPR049C YPS1P32329 569 aa1.35□□□□□ -2.19
ATG11YPR049C SPC34P36131 295 aa1.35□□□□□ -2.19
ATG11YPR049C TAD2P47058 250 aa1.35□□□□□ -2.19
ATG11YPR049C YIP3P53633 176 aa1.35□□□□□ -2.19
ATG11YPR049C PAA1Q12447 191 aaKnown RBP1.35□□□□□ -2.19
ATG11YPR049C URA6P15700 204 aa1.34□□□□□ -2.19
ATG11YPR049C RAD23P32628 398 aaKnown RBP1.34□□□□□ -2.19
ATG11YPR049C DOG2P38773 246 aa1.34□□□□□ -2.19
ATG11YPR049C GEP4P38812 185 aa1.34□□□□□ -2.19
ATG11YPR049C SWM2P40342 146 aa1.34□□□□□ -2.19
ATG11YPR049C YKE4P40544 346 aa1.34□□□□□ -2.19
ATG11YPR049C IMP2P46972 177 aa1.34□□□□□ -2.19
ATG11YPR049C YJR111CP47148 283 aaKnown RBP1.34□□□□□ -2.19
ATG11YPR049C LST7P53237 242 aa1.34□□□□□ -2.19
ATG11YPR049C ELC1Q03071 99 aa1.34□□□□□ -2.19
ATG11YPR049C MRX11Q03079 207 aa1.34□□□□□ -2.19
ATG11YPR049C RDI1Q12434 202 aa1.34□□□□□ -2.19
ATG11YPR049C YKL183C-AQ3E765 70 aa1.34□□□□□ -2.19
ATG11YPR049C COA6Q3E846 104 aa1.34□□□□□ -2.19
ATG11YPR049C YCR025CP25352 136 aa1.34□□□□□ -2.2
ATG11YPR049C ERV15P38312 142 aa1.34□□□□□ -2.2
ATG11YPR049C TIR3P40552 269 aa1.34□□□□□ -2.2
ATG11YPR049C LST8P41318 303 aa1.34□□□□□ -2.2
ATG11YPR049C RIB4P50861 169 aaPredicted RBP1.34□□□□□ -2.2
ATG11YPR049C RPL9BP51401 191 aaKnown RBP1.34□□□□□ -2.2
ATG11YPR049C CWC23P52868 283 aaPredicted RBP1.34□□□□□ -2.2
ATG11YPR049C YGR039WP53225 103 aa1.34□□□□□ -2.2
ATG11YPR049C ASI3P53983 676 aa1.34□□□□□ -2.2
ATG11YPR049C YDR366CP87287 132 aa1.34□□□□□ -2.2
ATG11YPR049C HNT1Q04344 158 aaKnown RBP1.34□□□□□ -2.2
ATG11YPR049C TVP18Q04767 167 aa1.34□□□□□ -2.2
ATG11YPR049C MHR1Q06630 226 aa1.34□□□□□ -2.2
ATG11YPR049C YLR412C-AQ3E742 68 aa1.34□□□□□ -2.2
ATG11YPR049C MRPL38P35996 138 aaPredicted RBP1.33□□□□□ -2.2
ATG11YPR049C YKR041WP36134 250 aa1.33□□□□□ -2.2
ATG11YPR049C RPF1P38805 295 aaKnown RBP1.33□□□□□ -2.2
ATG11YPR049C YEA6P39953 335 aa1.33□□□□□ -2.2
ATG11YPR049C DLS1P40366 167 aa1.33□□□□□ -2.2
ATG11YPR049C CAT5P41735 233 aa1.33□□□□□ -2.2
ATG11YPR049C DOC1P53068 250 aa1.33□□□□□ -2.2
ATG11YPR049C ARO8P53090 500 aaKnown RBP1.33□□□□□ -2.2
ATG11YPR049C ERV14P53173 138 aa1.33□□□□□ -2.2
ATG11YPR049C YCL001W-AP87012 153 aa1.33□□□□□ -2.2
ATG11YPR049C YMR315WQ04869 349 aaKnown RBP1.33□□□□□ -2.2
ATG11YPR049C CTR3Q06686 241 aa1.33□□□□□ -2.2
ATG11YPR049C YPR014CQ6B0W2 109 aa1.33□□□□□ -2.2
ATG11YPR049C ATR1P13090 542 aa1.33□□□□□ -2.2
ATG11YPR049C TIP1P27654 210 aaPredicted RBP1.33□□□□□ -2.2
ATG11YPR049C DOG1P38774 246 aa1.33□□□□□ -2.2
ATG11YPR049C CDC40P40968 455 aaPredicted RBP1.33□□□□□ -2.2
ATG11YPR049C IRC18P47056 224 aa1.33□□□□□ -2.2
ATG11YPR049C YJR011CP47086 261 aaPredicted RBP1.33□□□□□ -2.2
ATG11YPR049C ARP3P47117 449 aaKnown RBP1.33□□□□□ -2.2
ATG11YPR049C MCM22P47167 239 aa1.33□□□□□ -2.2
ATG11YPR049C YPS3Q12303 508 aa1.33□□□□□ -2.2
ATG11YPR049C JID1Q12350 301 aa1.33□□□□□ -2.2
ATG11YPR049C PCL9Q12477 304 aa1.33□□□□□ -2.2
ATG11YPR049C ATP5P09457 212 aa1.33□□□□□ -2.2
ATG11YPR049C RPL18AP0CX49 186 aaKnown RBP1.33□□□□□ -2.2
ATG11YPR049C RPL18BP0CX50 186 aaKnown RBP1.33□□□□□ -2.2
ATG11YPR049C YCR022CP25620 114 aa1.33□□□□□ -2.2
ATG11YPR049C SNC2P33328 115 aa1.33□□□□□ -2.2
ATG11YPR049C AVT5P38176 459 aa1.33□□□□□ -2.2
ATG11YPR049C RPS20P38701 121 aaKnown RBP1.33□□□□□ -2.2
ATG11YPR049C CPD1P53314 239 aa1.33□□□□□ -2.2
ATG11YPR049C TMA23Q03525 211 aa1.33□□□□□ -2.2
ATG11YPR049C ERP1Q05359 219 aaKnown RBP1.33□□□□□ -2.2
ATG11YPR049C SFH1Q06168 426 aa1.33□□□□□ -2.2
ATG11YPR049C YPL162CQ12042 273 aa1.33□□□□□ -2.2
ATG11YPR049C YCL021W-AQ96VH3 125 aa1.33□□□□□ -2.2
ATG11YPR049C SNF4P12904 322 aa1.32□□□□□ -2.2
ATG11YPR049C MAG1P22134 296 aaKnown RBP1.32□□□□□ -2.2
ATG11YPR049C AHC2P25649 128 aa1.32□□□□□ -2.2
ATG11YPR049C YHK8P38776 514 aa1.32□□□□□ -2.2
ATG11YPR049C IPI1P38803 334 aaPredicted RBP1.32□□□□□ -2.2
ATG11YPR049C AVT6P40074 448 aa1.32□□□□□ -2.2
ATG11YPR049C GLC8P41818 229 aa1.32□□□□□ -2.2
ATG11YPR049C SAY1P53324 424 aa1.32□□□□□ -2.2
ATG11YPR049C SWT21P53873 357 aaPredicted RBP1.32□□□□□ -2.2
ATG11YPR049C ODC1Q03028 310 aa1.32□□□□□ -2.2
ATG11YPR049C SMP3Q04174 516 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms