RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W TY1A-DR1Q03856 440 aa7.58□□□□□ -1.2
MSF1YPR047W TY1A-ML1Q04706 440 aaKnown RBP7.58□□□□□ -1.2
MSF1YPR047W LOA1Q06508 300 aa7.58□□□□□ -1.2
MSF1YPR047W CTR3Q06686 241 aa7.58□□□□□ -1.2
MSF1YPR047W FCF2Q12035 217 aaPredicted RBP7.58□□□□□ -1.2
MSF1YPR047W YPR063CQ12160 140 aa7.58□□□□□ -1.2
MSF1YPR047W TY1A-BRQ12217 440 aa7.58□□□□□ -1.2
MSF1YPR047W TY1A-DR3Q12441 440 aa7.58□□□□□ -1.2
MSF1YPR047W TY1A-NL2Q12470 440 aa7.58□□□□□ -1.2
MSF1YPR047W TY1A-GR2Q12485 440 aa7.58□□□□□ -1.2
MSF1YPR047W Q0142Q9ZZW4 58 aa7.58□□□□□ -1.2
MSF1YPR047W YDR157WA0A023PZE8 133 aa7.57□□□□□ -1.2
MSF1YPR047W POG1P40473 351 aa7.57□□□□□ -1.2
MSF1YPR047W MSK1P32048 576 aa7.56□□□□□ -1.2
MSF1YPR047W YEA4P40004 342 aa7.56□□□□□ -1.2
MSF1YPR047W SPC25P40014 221 aa7.55□□□□□ -1.2
MSF1YPR047W DDI2P0CH63 225 aa7.54□□□□□ -1.2
MSF1YPR047W DDI3P0CH64 225 aa7.54□□□□□ -1.2
MSF1YPR047W YBL059WP34224 193 aa7.54□□□□□ -1.2
MSF1YPR047W DER1P38307 211 aa7.54□□□□□ -1.2
MSF1YPR047W PEX7P39108 375 aa7.54□□□□□ -1.2
MSF1YPR047W SGF11Q03067 99 aa7.54□□□□□ -1.2
MSF1YPR047W MRPS17Q03246 237 aaPredicted RBP7.54□□□□□ -1.2
MSF1YPR047W YMR007WQ03675 126 aa7.54□□□□□ -1.2
MSF1YPR047W COX19Q3E731 98 aa7.54□□□□□ -1.2
MSF1YPR047W RPL2AP0CX45 254 aaKnown RBP7.53□□□□□ -1.2
MSF1YPR047W RPL2BP0CX46 254 aaKnown RBP7.53□□□□□ -1.2
MSF1YPR047W RPS11AP0CX47 156 aaKnown RBP7.53□□□□□ -1.2
MSF1YPR047W RPS11BP0CX48 156 aaKnown RBP7.53□□□□□ -1.2
MSF1YPR047W PGD1P40356 397 aa7.53□□□□□ -1.2
MSF1YPR047W YDL242WQ07746 117 aa7.53□□□□□ -1.2
MSF1YPR047W VAM10Q08474 114 aa7.53□□□□□ -1.2
MSF1YPR047W MRPL33P20084 86 aa7.52□□□□□ -1.2
MSF1YPR047W QCR9P22289 66 aa7.52□□□□□ -1.2
MSF1YPR047W YCR001WP25347 104 aa7.52□□□□□ -1.2
MSF1YPR047W PRE5P40302 234 aaKnown RBP7.52□□□□□ -1.2
MSF1YPR047W ZEO1Q08245 113 aa7.52□□□□□ -1.2
MSF1YPR047W SNU23Q12368 194 aaPredicted RBP7.52□□□□□ -1.2
MSF1YPR047W YPR145C-AQ2V2P0 78 aa7.52□□□□□ -1.2
MSF1YPR047W CDC50P25656 391 aa7.51□□□□□ -1.21
MSF1YPR047W AFR1P33304 620 aa7.51□□□□□ -1.21
MSF1YPR047W TMA23Q03525 211 aa7.51□□□□□ -1.21
MSF1YPR047W ERV2Q12284 196 aa7.51□□□□□ -1.21
MSF1YPR047W SPO13P23624 291 aa7.5□□□□□ -1.21
MSF1YPR047W YBR292CP38357 123 aa7.5□□□□□ -1.21
MSF1YPR047W MBB1P39534 108 aa7.5□□□□□ -1.21
MSF1YPR047W MOG1P47123 218 aa7.5□□□□□ -1.21
MSF1YPR047W SNO1Q03144 224 aa7.5□□□□□ -1.21
MSF1YPR047W AVO2Q04749 426 aa7.5□□□□□ -1.21
MSF1YPR047W CCW12Q12127 133 aa7.5□□□□□ -1.21
MSF1YPR047W AHT1P29589 182 aa7.49□□□□□ -1.21
MSF1YPR047W GTT1P40582 234 aa7.49□□□□□ -1.21
MSF1YPR047W YNR066CP53752 436 aa7.49□□□□□ -1.21
MSF1YPR047W TMA17Q12513 150 aa7.49□□□□□ -1.21
MSF1YPR047W RPB3P16370 318 aaKnown RBP7.48□□□□□ -1.21
MSF1YPR047W RPS2P25443 254 aaKnown RBP7.48□□□□□ -1.21
MSF1YPR047W YHR022CP38763 256 aa7.48□□□□□ -1.21
MSF1YPR047W RPR2P40571 144 aa7.48□□□□□ -1.21
MSF1YPR047W ATC1Q04005 294 aa7.48□□□□□ -1.21
MSF1YPR047W YMR253CQ04835 414 aa7.48□□□□□ -1.21
MSF1YPR047W DXO1Q06349 442 aa7.48□□□□□ -1.21
MSF1YPR047W TY1A-LR4P0C2I8 440 aaKnown RBP7.47□□□□□ -1.21
MSF1YPR047W TY1A-DR6P0CX70 440 aa7.47□□□□□ -1.21
MSF1YPR047W TY1A-ER1P0CX71 440 aa7.47□□□□□ -1.21
MSF1YPR047W TY1A-LR2P0CX72 440 aa7.47□□□□□ -1.21
MSF1YPR047W TY1A-PLP0CX73 440 aa7.47□□□□□ -1.21
MSF1YPR047W TY1A-JR1P0CX74 440 aa7.47□□□□□ -1.21
MSF1YPR047W TY1A-LR3P0CX75 440 aa7.47□□□□□ -1.21
MSF1YPR047W TY1A-ML2P0CX76 440 aa7.47□□□□□ -1.21
MSF1YPR047W HSP12P22943 109 aaKnown RBP7.47□□□□□ -1.21
MSF1YPR047W ATG8P38182 117 aaRIP-Chip data7.47□□□□□ -1.21not detected
MSF1YPR047W DSK2P48510 373 aa7.47□□□□□ -1.21
MSF1YPR047W YGR026WP53217 278 aa7.47□□□□□ -1.21
MSF1YPR047W TIM21P53220 239 aa7.47□□□□□ -1.21
MSF1YPR047W MRX11Q03079 207 aa7.47□□□□□ -1.21
MSF1YPR047W ADD37Q03233 198 aa7.47□□□□□ -1.21
MSF1YPR047W FIT2Q08906 153 aa7.47□□□□□ -1.21
MSF1YPR047W TY1A-GR1Q12085 440 aa7.47□□□□□ -1.21
MSF1YPR047W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.47□□□□□ -1.21
MSF1YPR047W TY1A-OLQ92392 440 aaKnown RBP7.47□□□□□ -1.21
MSF1YPR047W RIB4P50861 169 aaPredicted RBP7.46□□□□□ -1.21
MSF1YPR047W RIB5P38145 238 aa7.45□□□□□ -1.22
MSF1YPR047W VMA16P23968 213 aa7.44□□□□□ -1.22
MSF1YPR047W ACP1P32463 125 aa7.44□□□□□ -1.22
MSF1YPR047W YJR096WP47137 282 aa7.44□□□□□ -1.22
MSF1YPR047W ATX2Q12067 313 aa7.44□□□□□ -1.22
MSF1YPR047W YCR075W-AQ3E830 75 aa7.44□□□□□ -1.22
MSF1YPR047W ADH3P07246 375 aaKnown RBP7.44□□□□□ -1.22
MSF1YPR047W MRPL4P36517 319 aa7.44□□□□□ -1.22
MSF1YPR047W SDH8P38345 138 aa7.44□□□□□ -1.22
MSF1YPR047W NSE4P43124 402 aa7.44□□□□□ -1.22
MSF1YPR047W YOR015WQ12169 119 aa7.44□□□□□ -1.22
MSF1YPR047W MRPL20P22354 195 aaPredicted RBP7.43□□□□□ -1.22
MSF1YPR047W VHS2P40463 436 aa7.43□□□□□ -1.22
MSF1YPR047W VMA21P41806 77 aa7.43□□□□□ -1.22
MSF1YPR047W SMD3P43321 101 aaKnown RBP7.43□□□□□ -1.22
MSF1YPR047W DAN1P47178 298 aa7.43□□□□□ -1.22
MSF1YPR047W GIS2P53849 153 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
MSF1YPR047W YOL085CQ99345 113 aa7.43□□□□□ -1.22
MSF1YPR047W MRS1P07266 363 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms