RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W AVO2Q04749 426 aa5.13□□□□□ -1.59
CTF19YPL018W NHP6AP11632 93 aaKnown RBP5.12□□□□□ -1.59
CTF19YPL018W ICS2P38284 255 aa5.12□□□□□ -1.59
CTF19YPL018W YNL194CP40169 301 aa5.12□□□□□ -1.59
CTF19YPL018W ATG27P46989 271 aa5.12□□□□□ -1.59
CTF19YPL018W TOS8P53147 276 aa5.12□□□□□ -1.59
CTF19YPL018W YGR018CP53211 109 aa5.12□□□□□ -1.59
CTF19YPL018W CAB4P53332 305 aa5.12□□□□□ -1.59
CTF19YPL018W IZH1Q03419 316 aa5.12□□□□□ -1.59
CTF19YPL018W DXO1Q06349 442 aa5.12□□□□□ -1.59
CTF19YPL018W CDC7P06243 507 aa5.11□□□□□ -1.59
CTF19YPL018W RPS2P25443 254 aaKnown RBP5.11□□□□□ -1.59
CTF19YPL018W LDS1P31379 325 aa5.11□□□□□ -1.59
CTF19YPL018W SAS2P40963 338 aa5.11□□□□□ -1.59
CTF19YPL018W TAX4P47030 604 aa5.11□□□□□ -1.59
CTF19YPL018W PAU4P53427 120 aa5.11□□□□□ -1.59
CTF19YPL018W YML122CQ03207 126 aa5.11□□□□□ -1.59
CTF19YPL018W TPT1Q12272 230 aaKnown RBP5.11□□□□□ -1.59
CTF19YPL018W YKL183C-AQ3E765 70 aa5.11□□□□□ -1.59
CTF19YPL018W VMA9Q3E7B6 73 aa5.11□□□□□ -1.59
CTF19YPL018W YBR121C-AP0C5L4 52 aa5.1□□□□□ -1.59
CTF19YPL018W MRP2P10663 115 aaPredicted RBP5.1□□□□□ -1.59
CTF19YPL018W ALK2P32789 676 aaPredicted RBP5.1□□□□□ -1.59
CTF19YPL018W YNK1P36010 153 aaKnown RBP5.1□□□□□ -1.59
CTF19YPL018W SNU13P39990 126 aaKnown RBP5.1□□□□□ -1.59
CTF19YPL018W YGR219WP53307 113 aa5.1□□□□□ -1.59
CTF19YPL018W ADH2P00331 348 aaKnown RBP5.09□□□□□ -1.59
CTF19YPL018W CYC3P06182 269 aa5.09□□□□□ -1.59
CTF19YPL018W PAU1P0CE88 120 aa5.09□□□□□ -1.59
CTF19YPL018W PAU14P0CE89 120 aa5.09□□□□□ -1.59
CTF19YPL018W PAU6P0CE90 120 aa5.09□□□□□ -1.59
CTF19YPL018W PAU18P0CE91 120 aa5.09□□□□□ -1.59
CTF19YPL018W PAU8P0CE92 120 aa5.09□□□□□ -1.59
CTF19YPL018W PAU11P0CE93 120 aa5.09□□□□□ -1.59
CTF19YPL018W YER190C-BP0CX94 160 aa5.09□□□□□ -1.59
CTF19YPL018W YEL077W-AP0CX95 160 aa5.09□□□□□ -1.59
CTF19YPL018W YGR296C-BP0CX96 160 aa5.09□□□□□ -1.59
CTF19YPL018W YPL283W-BP0CX97 160 aa5.09□□□□□ -1.59
CTF19YPL018W YPR204C-AP0CX98 160 aa5.09□□□□□ -1.59
CTF19YPL018W YFL068WP0CX99 160 aa5.09□□□□□ -1.59
CTF19YPL018W YLL066W-AP0CY00 160 aa5.09□□□□□ -1.59
CTF19YPL018W YLL067W-AP0CY01 160 aa5.09□□□□□ -1.59
CTF19YPL018W PRY2P36110 329 aa5.09□□□□□ -1.59
CTF19YPL018W SFT2P38166 215 aa5.09□□□□□ -1.59
CTF19YPL018W IMD2P38697 523 aaKnown RBP5.09□□□□□ -1.59
CTF19YPL018W PAU13P38725 120 aa5.09□□□□□ -1.59
CTF19YPL018W DSK2P48510 373 aa5.09□□□□□ -1.59
CTF19YPL018W OCA2P53949 197 aa5.09□□□□□ -1.59
CTF19YPL018W PAU10Q03050 120 aa5.09□□□□□ -1.59
CTF19YPL018W PAU20Q08322 120 aa5.09□□□□□ -1.59
CTF19YPL018W GEP3Q08622 556 aa5.09□□□□□ -1.59
CTF19YPL018W PAU9Q3E770 120 aa5.09□□□□□ -1.59
CTF19YPL018W YGR035W-AQ45U48 73 aa5.09□□□□□ -1.59
CTF19YPL018W HSP12P22943 109 aaKnown RBP5.08□□□□□ -1.6
CTF19YPL018W VMA16P23968 213 aa5.08□□□□□ -1.6
CTF19YPL018W YKL102CP34249 101 aa5.08□□□□□ -1.6
CTF19YPL018W TRS20P38334 175 aa5.08□□□□□ -1.6
CTF19YPL018W FIP1P45976 327 aa5.08□□□□□ -1.6
CTF19YPL018W HST4P53688 370 aa5.08□□□□□ -1.6
CTF19YPL018W TIM18Q08749 192 aa5.08□□□□□ -1.6
CTF19YPL018W PRM3Q08931 133 aa5.08□□□□□ -1.6
CTF19YPL018W AYT1Q12226 474 aa5.08□□□□□ -1.6
CTF19YPL018W YHR213WP0CI67 198 aa5.07□□□□□ -1.6
CTF19YPL018W POP5P28005 173 aa5.07□□□□□ -1.6
CTF19YPL018W TIR2P33890 251 aa5.07□□□□□ -1.6
CTF19YPL018W LSM2P38203 95 aaKnown RBP5.07□□□□□ -1.6
CTF19YPL018W POR2P40478 281 aa5.07□□□□□ -1.6
CTF19YPL018W YPI1P43587 155 aa5.07□□□□□ -1.6
CTF19YPL018W RPA43P46669 326 aa5.07□□□□□ -1.6
CTF19YPL018W PCC1Q3E833 88 aa5.07□□□□□ -1.6
CTF19YPL018W RPL18AP0CX49 186 aaKnown RBP5.06□□□□□ -1.6
CTF19YPL018W RPL18BP0CX50 186 aaKnown RBP5.06□□□□□ -1.6
CTF19YPL018W YJL027CP47063 138 aaPredicted RBP5.06□□□□□ -1.6
CTF19YPL018W UBC7Q02159 165 aa5.06□□□□□ -1.6
CTF19YPL018W YPL080CQ02826 108 aa5.06□□□□□ -1.6
CTF19YPL018W SNO1Q03144 224 aa5.06□□□□□ -1.6
CTF19YPL018W LOA1Q06508 300 aa5.06□□□□□ -1.6
CTF19YPL018W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
CTF19YPL018W ERV2Q12284 196 aa5.06□□□□□ -1.6
CTF19YPL018W WIP1Q2V2P8 89 aa5.06□□□□□ -1.6
CTF19YPL018W YMR253CQ04835 414 aa5.05□□□□□ -1.6
CTF19YPL018W LDS2Q08218 356 aa5.05□□□□□ -1.6
CTF19YPL018W FIT2Q08906 153 aa5.05□□□□□ -1.6
CTF19YPL018W ATP16Q12165 160 aa5.05□□□□□ -1.6
CTF19YPL018W RPS28BP0C0X0 67 aaKnown RBP5.04□□□□□ -1.6
CTF19YPL018W DDI2P0CH63 225 aa5.04□□□□□ -1.6
CTF19YPL018W DDI3P0CH64 225 aa5.04□□□□□ -1.6
CTF19YPL018W YHR212W-AP0CX91 67 aa5.04□□□□□ -1.6
CTF19YPL018W SEC59P20048 519 aa5.04□□□□□ -1.6
CTF19YPL018W RNA15P25299 296 aaPredicted RBP5.04□□□□□ -1.6
CTF19YPL018W GSP1P32835 219 aaKnown RBP5.04□□□□□ -1.6
CTF19YPL018W GSP2P32836 220 aaKnown RBP5.04□□□□□ -1.6
CTF19YPL018W ELF1P36053 145 aa5.04□□□□□ -1.6
CTF19YPL018W SNF11P38956 169 aa5.04□□□□□ -1.6
CTF19YPL018W YIL024CP40543 189 aa5.04□□□□□ -1.6
CTF19YPL018W MRPL49P40858 161 aaPredicted RBP5.04□□□□□ -1.6
CTF19YPL018W CAX4P53223 239 aa5.04□□□□□ -1.6
CTF19YPL018W MRX11Q03079 207 aa5.04□□□□□ -1.6
CTF19YPL018W FYV7Q12247 151 aa5.04□□□□□ -1.6
CTF19YPL018W RPS28AQ3E7X9 67 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 107.3 ms