RNA–Protein interactions for RNA: YOR341W

RPA190, Transcript of RNA polymerase I largest subunit A190, yeastyeast

Gene RPA190, Length 4,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA190YOR341W PET100P38958 111 aa2.39□□□□□ -2.03
RPA190YOR341W ERV14P53173 138 aa2.39□□□□□ -2.03
RPA190YOR341W GIS2P53849 153 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
RPA190YOR341W TMA23Q03525 211 aa2.39□□□□□ -2.03
RPA190YOR341W BOL1Q3E793 110 aa2.39□□□□□ -2.03
RPA190YOR341W MRPL31P14063 131 aaPredicted RBP2.39□□□□□ -2.03
RPA190YOR341W YGL015CP33199 130 aa2.39□□□□□ -2.03
RPA190YOR341W SRL3P36167 246 aa2.39□□□□□ -2.03
RPA190YOR341W BDH1P39714 382 aa2.39□□□□□ -2.03
RPA190YOR341W MOG1P47123 218 aa2.39□□□□□ -2.03
RPA190YOR341W YGR149WP48236 432 aa2.39□□□□□ -2.03
RPA190YOR341W SNA2P56508 79 aa2.39□□□□□ -2.03
RPA190YOR341W YJL197C-AP0C5P0 93 aa2.38□□□□□ -2.03
RPA190YOR341W GPX2P38143 162 aa2.38□□□□□ -2.03
RPA190YOR341W DFM1Q12743 341 aaKnown RBP2.38□□□□□ -2.03
RPA190YOR341W UBI4P0CG63 381 aaKnown RBP2.38□□□□□ -2.03
RPA190YOR341W SHU1P38751 150 aa2.38□□□□□ -2.03
RPA190YOR341W YHR173CP38864 112 aa2.38□□□□□ -2.03
RPA190YOR341W VHS2P40463 436 aa2.38□□□□□ -2.03
RPA190YOR341W CIN5P40917 295 aa2.38□□□□□ -2.03
RPA190YOR341W TRS20P38334 175 aa2.38□□□□□ -2.03
RPA190YOR341W YHR140WP38842 239 aa2.38□□□□□ -2.03
RPA190YOR341W YAR068WP39564 161 aa2.38□□□□□ -2.03
RPA190YOR341W VTC1P40046 129 aaRIP-Chip data2.38□□□□□ -2.03not detected
RPA190YOR341W PBP4Q07362 185 aaKnown RBP2.38□□□□□ -2.03
RPA190YOR341W RPL14AP36105 138 aaKnown RBP2.38□□□□□ -2.03
RPA190YOR341W RPL14BP38754 138 aaKnown RBP2.38□□□□□ -2.03
RPA190YOR341W YEA6P39953 335 aa2.38□□□□□ -2.03
RPA190YOR341W YER076CP40049 302 aa2.38□□□□□ -2.03
RPA190YOR341W HST4P53688 370 aa2.38□□□□□ -2.03
RPA190YOR341W FCY1Q12178 158 aa2.38□□□□□ -2.03
RPA190YOR341W SPO13P23624 291 aa2.37□□□□□ -2.03
RPA190YOR341W PPQ1P32945 549 aa2.37□□□□□ -2.03
RPA190YOR341W DER1P38307 211 aa2.37□□□□□ -2.03
RPA190YOR341W YER137CP40083 148 aaKnown RBP2.37□□□□□ -2.03
RPA190YOR341W YIF1P53845 314 aaKnown RBP2.37□□□□□ -2.03
RPA190YOR341W API2Q04413 109 aa2.37□□□□□ -2.03
RPA190YOR341W SNU23Q12368 194 aaPredicted RBP2.37□□□□□ -2.03
RPA190YOR341W DCN1Q12395 269 aa2.37□□□□□ -2.03
RPA190YOR341W MDM10P18409 493 aa2.37□□□□□ -2.03
RPA190YOR341W YPS1P32329 569 aa2.37□□□□□ -2.03
RPA190YOR341W MBB1P39534 108 aa2.37□□□□□ -2.03
RPA190YOR341W ARP3P47117 449 aaKnown RBP2.37□□□□□ -2.03
RPA190YOR341W TPN1P53099 579 aa2.37□□□□□ -2.03
RPA190YOR341W CAX4P53223 239 aa2.37□□□□□ -2.03
RPA190YOR341W TOM7P53507 60 aa2.37□□□□□ -2.03
RPA190YOR341W DAD4P69851 72 aa2.37□□□□□ -2.03
RPA190YOR341W YOR304C-AO14468 76 aa2.37□□□□□ -2.03
RPA190YOR341W RPL27AP0C2H6 136 aaKnown RBP2.37□□□□□ -2.03
RPA190YOR341W MST28P39552 234 aa2.37□□□□□ -2.03
RPA190YOR341W JAC1P53193 184 aa2.37□□□□□ -2.03
RPA190YOR341W DYN2Q02647 92 aa2.37□□□□□ -2.03
RPA190YOR341W RPS22BQ3E7Y3 130 aaKnown RBP2.37□□□□□ -2.03
RPA190YOR341W YLR302CO13544 120 aa2.37□□□□□ -2.03
RPA190YOR341W MRPL24P36525 258 aaPredicted RBP2.37□□□□□ -2.03
RPA190YOR341W ASP1P38986 381 aaPredicted RBP2.37□□□□□ -2.03
RPA190YOR341W WWM1P43582 211 aaKnown RBP2.37□□□□□ -2.03
RPA190YOR341W ATG27P46989 271 aa2.37□□□□□ -2.03
RPA190YOR341W AIM34Q03673 198 aa2.37□□□□□ -2.03
RPA190YOR341W YMR244WQ04018 355 aa2.36□□□□□ -2.03
RPA190YOR341W CCW12Q12127 133 aa2.36□□□□□ -2.03
RPA190YOR341W YBL112CQ3E7Y4 105 aa2.36□□□□□ -2.03
RPA190YOR341W Q0032Q9ZZX7 96 aa2.36□□□□□ -2.03
RPA190YOR341W YDR157WA0A023PZE8 133 aa2.36□□□□□ -2.03
RPA190YOR341W YDR034C-AP0C289 58 aa2.36□□□□□ -2.03
RPA190YOR341W IMD2P38697 523 aaKnown RBP2.36□□□□□ -2.03
RPA190YOR341W YPS5P53057 165 aa2.36□□□□□ -2.03
RPA190YOR341W PRP8P33334 2413 aaKnown RBP2.36□□□□□ -2.03
RPA190YOR341W ECM12O13529 151 aa2.36□□□□□ -2.03
RPA190YOR341W CDC50P25656 391 aa2.36□□□□□ -2.03
RPA190YOR341W FMT1P32785 401 aa2.36□□□□□ -2.03
RPA190YOR341W YER135CP40082 130 aa2.36□□□□□ -2.03
RPA190YOR341W RPR2P40571 144 aa2.36□□□□□ -2.03
RPA190YOR341W TIM22Q12328 207 aa2.36□□□□□ -2.03
RPA190YOR341W TPI1P00942 248 aaKnown RBP2.36□□□□□ -2.03
RPA190YOR341W YCR001WP25347 104 aa2.36□□□□□ -2.03
RPA190YOR341W LDS1P31379 325 aa2.36□□□□□ -2.03
RPA190YOR341W KTI12P34253 313 aaKnown RBP2.36□□□□□ -2.03
RPA190YOR341W YIL059CP40520 121 aa2.36□□□□□ -2.03
RPA190YOR341W RPA14P50106 137 aa2.36□□□□□ -2.03
RPA190YOR341W PLP1Q04004 230 aa2.36□□□□□ -2.03
RPA190YOR341W FCF1Q05498 189 aaPredicted RBP2.36□□□□□ -2.03
RPA190YOR341W KEI1Q06346 221 aa2.36□□□□□ -2.03
RPA190YOR341W ATP16Q12165 160 aa2.36□□□□□ -2.03
RPA190YOR341W TY1A-DR4O74302 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-LR4P0C2I8 440 aaKnown RBP2.35□□□□□ -2.03
RPA190YOR341W TY1A-AP0CX57 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-PR1P0CX58 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-ORP0CX59 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-PR2P0CX60 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-DR5P0CX65 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-ER2P0CX66 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-GR3P0CX67 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-LR1P0CX68 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-MR2P0CX69 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-DR6P0CX70 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-ER1P0CX71 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-LR2P0CX72 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-PLP0CX73 440 aa2.35□□□□□ -2.03
RPA190YOR341W TY1A-JR1P0CX74 440 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms