RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB19	YOR322C	YMR090W	Q04304	227 aa	Known RBP	4.99	□□□□□ -1.61
LDB19	YOR322C	MTR2	P34232	184 aa	Known RBP	4.99	□□□□□ -1.61
LDB19	YOR322C	MID2	P36027	376 aa		4.99	□□□□□ -1.61
LDB19	YOR322C	AHP1	P38013	176 aa	Known RBP	4.99	□□□□□ -1.61
LDB19	YOR322C	GPI2	P46961	280 aa		4.99	□□□□□ -1.61
LDB19	YOR322C	ROT1	Q03691	256 aa		4.99	□□□□□ -1.61
LDB19	YOR322C	CNE1	P27825	502 aa		4.98	□□□□□ -1.61
LDB19	YOR322C	RPL40A	P0CH08	128 aa	Known RBP	4.98	□□□□□ -1.61
LDB19	YOR322C	RPL40B	P0CH09	128 aa	Known RBP	4.98	□□□□□ -1.61
LDB19	YOR322C	ASP1	P38986	381 aa	Predicted RBP	4.98	□□□□□ -1.61
LDB19	YOR322C	GAT4	P40569	121 aa		4.98	□□□□□ -1.61
LDB19	YOR322C	TIM18	Q08749	192 aa		4.98	□□□□□ -1.61
LDB19	YOR322C	ARF2	P19146	181 aa	Known RBP	4.97	□□□□□ -1.61
LDB19	YOR322C	SPL2	P38839	148 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	BNS1	P50084	137 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	YNL234W	P53857	426 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	ALG9	P53868	555 aa	Known RBP	4.97	□□□□□ -1.61
LDB19	YOR322C	YDR119W-A	Q2V2P9	66 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	PAU19	P0CE85	124 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	PAU21	P0CE86	164 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	PAU22	P0CE87	164 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	PAU3	P25610	124 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	YLR363W-A	Q3E747	85 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	NAG1	Q8TGN9	163 aa		4.97	□□□□□ -1.61
LDB19	YOR322C	PEX17	P40155	199 aa		4.96	□□□□□ -1.62
LDB19	YOR322C	ASM4	Q05166	528 aa		4.96	□□□□□ -1.62
LDB19	YOR322C	YPL119C-A	Q3E751	87 aa		4.96	□□□□□ -1.62
LDB19	YOR322C	URB1	P34241	1764 aa	Known RBP	4.96	□□□□□ -1.62
LDB19	YOR322C	LAA1	P39526	2014 aa		4.96	□□□□□ -1.62
LDB19	YOR322C	Q0255	P03881	472 aa		4.96	□□□□□ -1.62
LDB19	YOR322C	PHO88	P38264	188 aa	Predicted RBP	4.96	□□□□□ -1.62
LDB19	YOR322C	PHS1	P40857	217 aa		4.96	□□□□□ -1.62
LDB19	YOR322C	UBC13	P52490	153 aa		4.96	□□□□□ -1.62
LDB19	YOR322C	MIC10	Q96VH5	97 aa		4.96	□□□□□ -1.62
LDB19	YOR322C	GPI18	P38211	433 aa		4.95	□□□□□ -1.62
LDB19	YOR322C	YBR292C	P38357	123 aa		4.95	□□□□□ -1.62
LDB19	YOR322C	YNR064C	P53750	290 aa		4.95	□□□□□ -1.62
LDB19	YOR322C	SUT2	Q12286	268 aa		4.95	□□□□□ -1.62
LDB19	YOR322C	LDB16	P25587	256 aa		4.95	□□□□□ -1.62
LDB19	YOR322C	YNL200C	P40165	246 aa	Known RBP	4.95	□□□□□ -1.62
LDB19	YOR322C	OST1	P41543	476 aa	Known RBP	4.95	□□□□□ -1.62
LDB19	YOR322C	SMD1	Q02260	146 aa	Predicted RBP	4.95	□□□□□ -1.62
LDB19	YOR322C	YDR042C	Q03205	200 aa		4.95	□□□□□ -1.62
LDB19	YOR322C	YLR012C	Q07927	99 aa		4.95	□□□□□ -1.62
LDB19	YOR322C	YIL102C-A	Q2V2P5	75 aa		4.95	□□□□□ -1.62
LDB19	YOR322C	URA5	P13298	226 aa	Known RBP	4.94	□□□□□ -1.62
LDB19	YOR322C	SPT4	P32914	102 aa	Predicted RBP	4.94	□□□□□ -1.62
LDB19	YOR322C	APS1	P35181	156 aa		4.94	□□□□□ -1.62
LDB19	YOR322C	YPS5	P53057	165 aa		4.94	□□□□□ -1.62
LDB19	YOR322C	SDS23	P53172	527 aa		4.94	□□□□□ -1.62
LDB19	YOR322C	SLH1	P53327	1967 aa	Known RBP	4.94	□□□□□ -1.62
LDB19	YOR322C	MAK31	P23059	88 aa		4.94	□□□□□ -1.62
LDB19	YOR322C	RPA12	P32529	125 aa	Known RBP	4.94	□□□□□ -1.62
LDB19	YOR322C	CTP1	P38152	299 aa		4.94	□□□□□ -1.62
LDB19	YOR322C	YHL018W	P38744	120 aa	Predicted RBP	4.94	□□□□□ -1.62
LDB19	YOR322C	YGR050C	P53231	118 aa		4.94	□□□□□ -1.62
LDB19	YOR322C	HSP10	P38910	106 aa		4.93	□□□□□ -1.62
LDB19	YOR322C	YNL046W	P53956	172 aa		4.93	□□□□□ -1.62
LDB19	YOR322C	TSC3	Q3E790	80 aa		4.93	□□□□□ -1.62
LDB19	YOR322C	HEM2	P05373	342 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	YGL088W	P53151	121 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	MPC1	P53157	130 aa	Known RBP	4.92	□□□□□ -1.62
LDB19	YOR322C	YGR164W	P53291	111 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	NDD1	Q08887	554 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	YBR255C-A	Q3E776	120 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	YCL021W-A	Q96VH3	125 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	MSB2	P32334	1306 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	MYO1	P08964	1928 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	KRE1	P17260	313 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	PAU5	P43575	122 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	YJL028W	P47062	111 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	CUZ1	P53899	274 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	SPG4	Q04438	115 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	IRC25	Q07951	179 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	ATG41	Q12048	136 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	ATO3	Q12359	275 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	DFM1	Q12743	341 aa	Known RBP	4.92	□□□□□ -1.62
LDB19	YOR322C	YHR214C-E	Q8TGK0	99 aa		4.92	□□□□□ -1.62
LDB19	YOR322C	YOL162W	P0CF19	215 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	CTF8	P38877	133 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	YNL195C	P40168	261 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	MTR3	P48240	250 aa	Predicted RBP	4.91	□□□□□ -1.62
LDB19	YOR322C	TVP15	Q03860	143 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	YPL264C	Q08980	353 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	RPL22A	P05749	121 aa	Known RBP	4.91	□□□□□ -1.62
LDB19	YOR322C	UBC4	P15731	148 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	AHT1	P29589	182 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	CSE2	P33308	149 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	SFT2	P38166	215 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	ECM34	P38728	170 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	GGC1	P38988	300 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	JJJ3	P47138	172 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	YAL063C-A	Q3E791	96 aa		4.91	□□□□□ -1.62
LDB19	YOR322C	PAU16	P35994	123 aa		4.9	□□□□□ -1.62
LDB19	YOR322C	CCH1	P50077	2039 aa		4.9	□□□□□ -1.62
LDB19	YOR322C	ARF1	P11076	181 aa	Known RBP	4.9	□□□□□ -1.63
LDB19	YOR322C	RPL16A	P26784	199 aa	Known RBP	4.9	□□□□□ -1.63
LDB19	YOR322C	TDA4	P47153	279 aa		4.9	□□□□□ -1.63
LDB19	YOR322C	NHP2	P32495	156 aa	Predicted RBP	4.89	□□□□□ -1.63
LDB19	YOR322C	RPP1	P38786	293 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms