RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C RPI1P23250 407 aaKnown RBP4.37□□□□□ -1.71
RAT1YOR048C QRI5P32344 111 aa4.37□□□□□ -1.71
RAT1YOR048C MRPL39P36533 70 aa4.37□□□□□ -1.71
RAT1YOR048C DOG2P38773 246 aa4.37□□□□□ -1.71
RAT1YOR048C PET8P38921 284 aa4.37□□□□□ -1.71
RAT1YOR048C HAC1P41546 238 aa4.37□□□□□ -1.71
RAT1YOR048C CRZ1P53968 678 aa4.37□□□□□ -1.71
RAT1YOR048C GAT3Q07928 141 aa4.37□□□□□ -1.71
RAT1YOR048C RPL7BQ12213 244 aaKnown RBP4.37□□□□□ -1.71
RAT1YOR048C CDC43P18898 376 aa4.37□□□□□ -1.71
RAT1YOR048C PAU16P35994 123 aa4.37□□□□□ -1.71
RAT1YOR048C MIC26P50087 233 aa4.37□□□□□ -1.71
RAT1YOR048C POP3P53833 195 aaPredicted RBP4.37□□□□□ -1.71
RAT1YOR048C YDL129WQ07555 291 aa4.37□□□□□ -1.71
RAT1YOR048C FIT2Q08906 153 aa4.37□□□□□ -1.71
RAT1YOR048C SOR1P35497 357 aaKnown RBP4.36□□□□□ -1.71
RAT1YOR048C MSL1P40567 111 aaPredicted RBP4.36□□□□□ -1.71
RAT1YOR048C LIP2Q06005 328 aa4.36□□□□□ -1.71
RAT1YOR048C SOR2Q07786 357 aa4.36□□□□□ -1.71
RAT1YOR048C VPS63O13549 108 aa4.36□□□□□ -1.71
RAT1YOR048C UME6P39001 836 aa4.36□□□□□ -1.71
RAT1YOR048C CYB5P40312 120 aa4.36□□□□□ -1.71
RAT1YOR048C SAL1D6W196 494 aa4.35□□□□□ -1.71
RAT1YOR048C TOM40P23644 387 aaKnown RBP4.35□□□□□ -1.71
RAT1YOR048C SRP21P32342 167 aa4.35□□□□□ -1.71
RAT1YOR048C SEC72P39742 193 aaKnown RBP4.35□□□□□ -1.71
RAT1YOR048C TIM18Q08749 192 aa4.35□□□□□ -1.71
RAT1YOR048C YGL258W-AQ3E740 77 aa4.35□□□□□ -1.71
RAT1YOR048C YCR022CP25620 114 aa4.35□□□□□ -1.71
RAT1YOR048C YMR181CQ03231 154 aa4.35□□□□□ -1.71
RAT1YOR048C DFM1Q12743 341 aaKnown RBP4.35□□□□□ -1.71
RAT1YOR048C RPL31AP0C2H8 113 aaKnown RBP4.35□□□□□ -1.71
RAT1YOR048C RPL31BP0C2H9 113 aaKnown RBP4.35□□□□□ -1.71
RAT1YOR048C YOX1P34161 385 aa4.35□□□□□ -1.71
RAT1YOR048C PRY2P36110 329 aa4.35□□□□□ -1.71
RAT1YOR048C FYV4P38783 130 aaPredicted RBP4.35□□□□□ -1.71
RAT1YOR048C RPF1P38805 295 aaKnown RBP4.35□□□□□ -1.71
RAT1YOR048C CPR5P35176 225 aa4.34□□□□□ -1.71
RAT1YOR048C YBR220CP38318 560 aa4.34□□□□□ -1.71
RAT1YOR048C YAR068WP39564 161 aa4.34□□□□□ -1.71
RAT1YOR048C YGL230CP53074 147 aa4.34□□□□□ -1.71
RAT1YOR048C TRI1Q05024 226 aa4.34□□□□□ -1.71
RAT1YOR048C PRP11Q07350 266 aaPredicted RBP4.34□□□□□ -1.71
RAT1YOR048C RXT3Q07458 294 aa4.34□□□□□ -1.71
RAT1YOR048C YPS3Q12303 508 aa4.34□□□□□ -1.71
RAT1YOR048C PRP8P33334 2413 aaKnown RBP4.34□□□□□ -1.71
RAT1YOR048C HSP12P22943 109 aaKnown RBP4.34□□□□□ -1.72
RAT1YOR048C YKR032WP36127 104 aa4.34□□□□□ -1.72
RAT1YOR048C DAD4P69851 72 aa4.34□□□□□ -1.72
RAT1YOR048C YPR170W-BP0C5R9 85 aa4.33□□□□□ -1.72
RAT1YOR048C YER190C-BP0CX94 160 aa4.33□□□□□ -1.72
RAT1YOR048C YEL077W-AP0CX95 160 aa4.33□□□□□ -1.72
RAT1YOR048C YGR296C-BP0CX96 160 aa4.33□□□□□ -1.72
RAT1YOR048C YPL283W-BP0CX97 160 aa4.33□□□□□ -1.72
RAT1YOR048C YPR204C-AP0CX98 160 aa4.33□□□□□ -1.72
RAT1YOR048C MRPL31P14063 131 aaPredicted RBP4.33□□□□□ -1.72
RAT1YOR048C YKR070WP36151 352 aaKnown RBP4.33□□□□□ -1.72
RAT1YOR048C BRP1P53194 125 aa4.33□□□□□ -1.72
RAT1YOR048C YGR018CP53211 109 aa4.33□□□□□ -1.72
RAT1YOR048C AYT1Q12226 474 aa4.33□□□□□ -1.72
RAT1YOR048C HEM4P06174 275 aa4.33□□□□□ -1.72
RAT1YOR048C ECM14P38836 430 aa4.33□□□□□ -1.72
RAT1YOR048C YHR173CP38864 112 aa4.33□□□□□ -1.72
RAT1YOR048C DPP1Q05521 289 aa4.33□□□□□ -1.72
RAT1YOR048C YPL162CQ12042 273 aa4.33□□□□□ -1.72
RAT1YOR048C JID1Q12350 301 aa4.33□□□□□ -1.72
RAT1YOR048C HTB2P02294 131 aa4.32□□□□□ -1.72
RAT1YOR048C PRE1P22141 198 aaKnown RBP4.32□□□□□ -1.72
RAT1YOR048C PAU23Q07987 124 aa4.32□□□□□ -1.72
RAT1YOR048C PAU17Q12370 124 aa4.32□□□□□ -1.72
RAT1YOR048C MRS1P07266 363 aa4.32□□□□□ -1.72
RAT1YOR048C DUO1P53168 247 aaKnown RBP4.32□□□□□ -1.72
RAT1YOR048C YIL014C-AQ02598 104 aa4.32□□□□□ -1.72
RAT1YOR048C TVP18Q04767 167 aa4.32□□□□□ -1.72
RAT1YOR048C ISU2Q12056 156 aa4.32□□□□□ -1.72
RAT1YOR048C YMR31P19955 123 aa4.32□□□□□ -1.72
RAT1YOR048C YPS1P32329 569 aa4.32□□□□□ -1.72
RAT1YOR048C TIR2P33890 251 aa4.32□□□□□ -1.72
RAT1YOR048C MTR2P34232 184 aaKnown RBP4.32□□□□□ -1.72
RAT1YOR048C YNL198CP40166 100 aa4.32□□□□□ -1.72
RAT1YOR048C AGE2P40529 298 aa4.32□□□□□ -1.72
RAT1YOR048C MRPL19P53875 158 aa4.32□□□□□ -1.72
RAT1YOR048C YBL029C-AQ3E756 94 aa4.32□□□□□ -1.72
RAT1YOR048C YJL213WP40896 331 aa4.31□□□□□ -1.72
RAT1YOR048C YOR032W-AQ8TGS1 66 aa4.31□□□□□ -1.72
RAT1YOR048C MBF1O14467 151 aaKnown RBP4.31□□□□□ -1.72
RAT1YOR048C CSH1P38287 376 aa4.31□□□□□ -1.72
RAT1YOR048C PSD1P39006 500 aa4.31□□□□□ -1.72
RAT1YOR048C SED1Q01589 338 aa4.31□□□□□ -1.72
RAT1YOR048C PMU1P36069 295 aa4.3□□□□□ -1.72
RAT1YOR048C YBL071CP38185 102 aa4.3□□□□□ -1.72
RAT1YOR048C GLE2P40066 365 aa4.3□□□□□ -1.72
RAT1YOR048C YFL054CP43549 646 aa4.3□□□□□ -1.72
RAT1YOR048C GRH1Q04410 372 aaKnown RBP4.3□□□□□ -1.72
RAT1YOR048C YCL048W-AQ2V2Q2 79 aa4.3□□□□□ -1.72
RAT1YOR048C DDI2P0CH63 225 aa4.3□□□□□ -1.72
RAT1YOR048C DDI3P0CH64 225 aa4.3□□□□□ -1.72
RAT1YOR048C SPC29P33419 253 aa4.3□□□□□ -1.72
RAT1YOR048C YKL102CP34249 101 aa4.3□□□□□ -1.72
RAT1YOR048C YPI1P43587 155 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms