RNA–Protein interactions for RNA: YNL325C

FIG4, Transcript of Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase, yeast

Gene FIG4, Length 2,640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIG4	YNL325C	YHR007C-A	Q07074	71 aa		0.61	□□□□□ -2.31
FIG4	YNL325C	IRC23	Q08416	157 aa		0.61	□□□□□ -2.31
FIG4	YNL325C	PST2	Q12335	198 aa	Known RBP	0.61	□□□□□ -2.31
FIG4	YNL325C	YLR412C-A	Q3E742	68 aa		0.61	□□□□□ -2.31
FIG4	YNL325C	ATP7	P30902	174 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	YEL067C	P39978	195 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	NOC4	Q06512	552 aa	Predicted RBP	0.6	□□□□□ -2.31
FIG4	YNL325C	ATP20	Q12233	115 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	AHC2	P25649	128 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	RPB7	P34087	171 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	SHG1	P38337	142 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	PRS3	P38689	320 aa	Known RBP	0.6	□□□□□ -2.31
FIG4	YNL325C	YEL008W	P40001	126 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	MPM1	P40364	252 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	YIL086C	P40503	102 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	YNL033W	P53964	284 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	YMR099C	Q03161	297 aa	Known RBP	0.6	□□□□□ -2.31
FIG4	YNL325C	RCE1	Q03530	315 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	PRP11	Q07350	266 aa	Predicted RBP	0.6	□□□□□ -2.31
FIG4	YNL325C	YML100W-A	Q8TGT0	57 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	IGO2	Q9P305	131 aa		0.6	□□□□□ -2.31
FIG4	YNL325C	COX8	P04039	78 aa		0.59	□□□□□ -2.31
FIG4	YNL325C	FYV4	P38783	130 aa	Predicted RBP	0.59	□□□□□ -2.31
FIG4	YNL325C	SPC25	P40014	221 aa		0.59	□□□□□ -2.31
FIG4	YNL325C	HYR1	P40581	163 aa	Known RBP	0.59	□□□□□ -2.31
FIG4	YNL325C	GPI14	P47088	403 aa	Known RBP	0.59	□□□□□ -2.31
FIG4	YNL325C	YOL014W	Q08110	124 aa		0.59	□□□□□ -2.31
FIG4	YNL325C	DAS2	Q12084	232 aa		0.59	□□□□□ -2.31
FIG4	YNL325C	YPR013C	Q12145	317 aa		0.59	□□□□□ -2.31
FIG4	YNL325C	YOR015W	Q12169	119 aa		0.59	□□□□□ -2.31
FIG4	YNL325C	MAK31	P23059	88 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	TAH1	P25638	111 aa	Predicted RBP	0.59	□□□□□ -2.32
FIG4	YNL325C	NSG1	P38837	291 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	NVJ1	P38881	321 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	AIM2	P39721	246 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	POG1	P40473	351 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	RPS29B	P41058	56 aa	Known RBP	0.59	□□□□□ -2.32
FIG4	YNL325C	ALB1	P47019	175 aa	Predicted RBP	0.59	□□□□□ -2.32
FIG4	YNL325C	SNO1	Q03144	224 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	GPI17	Q04080	534 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	YDR391C	Q04170	232 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	FIT2	Q08906	153 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	YOR381W-A	Q3E804	55 aa		0.59	□□□□□ -2.32
FIG4	YNL325C	SLH1	P53327	1967 aa	Known RBP	0.59	□□□□□ -2.32
FIG4	YNL325C	RPL35A	P0CX84	120 aa	Known RBP	0.58	□□□□□ -2.32
FIG4	YNL325C	RPL35B	P0CX85	120 aa	Known RBP	0.58	□□□□□ -2.32
FIG4	YNL325C	CAF4	P36130	643 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	PAM17	P36147	197 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	CUP9	P41817	306 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	TTI2	P47168	421 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	HPT1	Q04178	221 aa	Known RBP	0.58	□□□□□ -2.32
FIG4	YNL325C	YET3	Q07451	203 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	LCL2	Q08045	131 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	DGK1	Q12382	290 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	SUA7	P29055	345 aa	Predicted RBP	0.58	□□□□□ -2.32
FIG4	YNL325C	SFK1	P35735	353 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	RRT1	P38192	103 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	YBR242W	P38331	238 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	NSA2	P40078	261 aa	Known RBP	0.58	□□□□□ -2.32
FIG4	YNL325C	GAT4	P40569	121 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	TMA22	P47089	198 aa	Predicted RBP	0.58	□□□□□ -2.32
FIG4	YNL325C	YHP1	Q04116	353 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	YMR253C	Q04835	414 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	COA3	Q3E7B2	85 aa		0.58	□□□□□ -2.32
FIG4	YNL325C	AUA1	P32450	94 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	ECM4	P36156	370 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	EGD2	P38879	174 aa	Known RBP	0.57	□□□□□ -2.32
FIG4	YNL325C	RFC2	P40348	353 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	DML1	Q03652	475 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	AIM34	Q03673	198 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	SHH4	Q06236	168 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	YPR203W	Q08994	102 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.57	□□□□□ -2.32	not detected
FIG4	YNL325C	YCR023C	P25351	611 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	CPR5	P35176	225 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	NSE4	P43124	402 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	YNL140C	P53910	189 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	YLR460C	P54007	376 aa		0.57	□□□□□ -2.32
FIG4	YNL325C	ATG38	Q05789	226 aa	Known RBP	0.57	□□□□□ -2.32
FIG4	YNL325C	UBC8	P28263	218 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	ETR1	P38071	380 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	CCS1	P40202	249 aa	Known RBP	0.56	□□□□□ -2.32
FIG4	YNL325C	PAC10	P48363	199 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	YIP3	P53633	176 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	YPR127W	Q06494	345 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	FYV12	Q08559	129 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	NSP1	P14907	823 aa	Known RBP	0.56	□□□□□ -2.32
FIG4	YNL325C	RAD51	P25454	400 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	TRR1	P29509	319 aa	Known RBP	0.56	□□□□□ -2.32
FIG4	YNL325C	YBL010C	P32788	280 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	GSP2	P32836	220 aa	Known RBP	0.56	□□□□□ -2.32
FIG4	YNL325C	XPT1	P47165	209 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	GIM3	P53900	129 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	RRP17	Q04031	235 aa	Predicted RBP	0.56	□□□□□ -2.32
FIG4	YNL325C	GAL83	Q04739	417 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	YPR202W	Q08993	238 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	YPR014C	Q6B0W2	109 aa		0.56	□□□□□ -2.32
FIG4	YNL325C	YHR212W-A	P0CX91	67 aa		0.55	□□□□□ -2.32
FIG4	YNL325C	TRX3	P25372	127 aa		0.55	□□□□□ -2.32
FIG4	YNL325C	SOK1	P40317	901 aa		0.55	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms