RNA–Protein interactions for RNA: YNL292W

PUS4, Transcript of Pseudouridine synthase, yeast

Gene PUS4, Length 1,212 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS4	YNL292W	BER1	Q06688	274 aa	Known RBP	5.01	□□□□□ -1.61
PUS4	YNL292W	YOL160W	Q08321	113 aa		5.01	□□□□□ -1.61
PUS4	YNL292W	FCF2	Q12035	217 aa	Predicted RBP	5.01	□□□□□ -1.61
PUS4	YNL292W	VMA16	P23968	213 aa		5	□□□□□ -1.61
PUS4	YNL292W	YCR025C	P25352	136 aa		5	□□□□□ -1.61
PUS4	YNL292W	ASP1	P38986	381 aa	Predicted RBP	5	□□□□□ -1.61
PUS4	YNL292W	GCV3	P39726	170 aa	Predicted RBP	5	□□□□□ -1.61
PUS4	YNL292W	YEA4	P40004	342 aa		5	□□□□□ -1.61
PUS4	YNL292W	SNX4	P47057	423 aa		5	□□□□□ -1.61
PUS4	YNL292W	YJR015W	P47090	510 aa		5	□□□□□ -1.61
PUS4	YNL292W	HST4	P53688	370 aa		5	□□□□□ -1.61
PUS4	YNL292W	UBC7	Q02159	165 aa		5	□□□□□ -1.61
PUS4	YNL292W	SDH7	Q04401	133 aa		5	□□□□□ -1.61
PUS4	YNL292W	PRR2	Q12310	699 aa		5	□□□□□ -1.61
PUS4	YNL292W	RPS25B	P0C0T4	108 aa	Known RBP	4.99	□□□□□ -1.61
PUS4	YNL292W	UBI4	P0CG63	381 aa	Known RBP	4.99	□□□□□ -1.61
PUS4	YNL292W	RPS11A	P0CX47	156 aa	Known RBP	4.99	□□□□□ -1.61
PUS4	YNL292W	RPS11B	P0CX48	156 aa	Known RBP	4.99	□□□□□ -1.61
PUS4	YNL292W	LAC1	P28496	418 aa		4.99	□□□□□ -1.61
PUS4	YNL292W	EMP24	P32803	203 aa	Known RBP	4.99	□□□□□ -1.61
PUS4	YNL292W	COA4	Q05809	96 aa		4.99	□□□□□ -1.61
PUS4	YNL292W	YPL162C	Q12042	273 aa		4.99	□□□□□ -1.61
PUS4	YNL292W	AYT1	Q12226	474 aa		4.99	□□□□□ -1.61
PUS4	YNL292W	RPS25A	Q3E792	108 aa	Predicted RBP	4.99	□□□□□ -1.61
PUS4	YNL292W	YBR298C-A	Q8TGK4	73 aa		4.99	□□□□□ -1.61
PUS4	YNL292W	YDR157W	A0A023PZE8	133 aa		4.98	□□□□□ -1.61
PUS4	YNL292W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
PUS4	YNL292W	FPR2	P32472	135 aa		4.98	□□□□□ -1.61
PUS4	YNL292W	SHB17	P36136	271 aa	Known RBP	4.98	□□□□□ -1.61
PUS4	YNL292W	YGR269W	P40326	108 aa		4.98	□□□□□ -1.61
PUS4	YNL292W	ATG27	P46989	271 aa		4.98	□□□□□ -1.61
PUS4	YNL292W	MCM22	P47167	239 aa		4.98	□□□□□ -1.61
PUS4	YNL292W	ODC1	Q03028	310 aa		4.98	□□□□□ -1.61
PUS4	YNL292W	RPL2A	P0CX45	254 aa	Known RBP	4.97	□□□□□ -1.61
PUS4	YNL292W	RPL2B	P0CX46	254 aa	Known RBP	4.97	□□□□□ -1.61
PUS4	YNL292W	AIM24	P47127	394 aa		4.97	□□□□□ -1.61
PUS4	YNL292W	IZH1	Q03419	316 aa		4.97	□□□□□ -1.61
PUS4	YNL292W	YLR179C	Q06252	201 aa	Known RBP	4.97	□□□□□ -1.61
PUS4	YNL292W	LOA1	Q06508	300 aa		4.97	□□□□□ -1.61
PUS4	YNL292W	SFT2	P38166	215 aa		4.96	□□□□□ -1.62
PUS4	YNL292W	LSM2	P38203	95 aa	Known RBP	4.96	□□□□□ -1.62
PUS4	YNL292W	PRE5	P40302	234 aa	Known RBP	4.96	□□□□□ -1.62
PUS4	YNL292W	FMP41	P53889	259 aa	Known RBP	4.96	□□□□□ -1.62
PUS4	YNL292W	MRPS17	Q03246	237 aa	Predicted RBP	4.96	□□□□□ -1.62
PUS4	YNL292W	SAL1	D6W196	494 aa		4.95	□□□□□ -1.62
PUS4	YNL292W	CDC43	P18898	376 aa		4.95	□□□□□ -1.62
PUS4	YNL292W	TIR2	P33890	251 aa		4.95	□□□□□ -1.62
PUS4	YNL292W	YNR066C	P53752	436 aa		4.95	□□□□□ -1.62
PUS4	YNL292W	YPR063C	Q12160	140 aa		4.95	□□□□□ -1.62
PUS4	YNL292W	FMP16	Q12497	93 aa		4.95	□□□□□ -1.62
PUS4	YNL292W	AHT1	P29589	182 aa		4.94	□□□□□ -1.62
PUS4	YNL292W	EMC5	P40540	141 aa		4.94	□□□□□ -1.62
PUS4	YNL292W	ORM1	P53224	222 aa		4.94	□□□□□ -1.62
PUS4	YNL292W	BOR1	P53838	576 aa		4.94	□□□□□ -1.62
PUS4	YNL292W	SHH3	Q04487	196 aa		4.94	□□□□□ -1.62
PUS4	YNL292W	QCR9	P22289	66 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	SPO13	P23624	291 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	CDC50	P25656	391 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	YBL059W	P34224	193 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	YBR292C	P38357	123 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	VMA7	P39111	118 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	MIC27	P50945	234 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	YMR007W	Q03675	126 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	CTR3	Q06686	241 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	LCL2	Q08045	131 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	YOR015W	Q12169	119 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	ERV2	Q12284	196 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	YOL085C	Q99345	113 aa		4.93	□□□□□ -1.62
PUS4	YNL292W	YHR022C	P38763	256 aa		4.92	□□□□□ -1.62
PUS4	YNL292W	PET100	P38958	111 aa		4.92	□□□□□ -1.62
PUS4	YNL292W	YCL001W-A	P87012	153 aa		4.92	□□□□□ -1.62
PUS4	YNL292W	ADD37	Q03233	198 aa		4.92	□□□□□ -1.62
PUS4	YNL292W	ANB1	P19211	157 aa		4.91	□□□□□ -1.62
PUS4	YNL292W	DER1	P38307	211 aa		4.91	□□□□□ -1.62
PUS4	YNL292W	YNL200C	P40165	246 aa	Known RBP	4.91	□□□□□ -1.62
PUS4	YNL292W	VHS2	P40463	436 aa		4.91	□□□□□ -1.62
PUS4	YNL292W	RIB4	P50861	169 aa	Predicted RBP	4.91	□□□□□ -1.62
PUS4	YNL292W	UBC12	P52491	188 aa		4.91	□□□□□ -1.62
PUS4	YNL292W	AVO2	Q04749	426 aa		4.91	□□□□□ -1.62
PUS4	YNL292W	CCW12	Q12127	133 aa		4.91	□□□□□ -1.62
PUS4	YNL292W	ATP14	Q12349	124 aa		4.91	□□□□□ -1.62
PUS4	YNL292W	COX19	Q3E731	98 aa		4.91	□□□□□ -1.62
PUS4	YNL292W	UIP3	P39547	235 aa		4.9	□□□□□ -1.63
PUS4	YNL292W	SPC25	P40014	221 aa		4.9	□□□□□ -1.63
PUS4	YNL292W	SAS2	P40963	338 aa		4.9	□□□□□ -1.63
PUS4	YNL292W	DDI2	P0CH63	225 aa		4.89	□□□□□ -1.63
PUS4	YNL292W	DDI3	P0CH64	225 aa		4.89	□□□□□ -1.63
PUS4	YNL292W	MRP2	P10663	115 aa	Predicted RBP	4.89	□□□□□ -1.63
PUS4	YNL292W	SHG1	P38337	142 aa		4.89	□□□□□ -1.63
PUS4	YNL292W	SMD3	P43321	101 aa	Known RBP	4.89	□□□□□ -1.63
PUS4	YNL292W	CAF40	P53829	373 aa		4.89	□□□□□ -1.63
PUS4	YNL292W	YCR075W-A	Q3E830	75 aa		4.89	□□□□□ -1.63
PUS4	YNL292W	MSK1	P32048	576 aa		4.88	□□□□□ -1.63
PUS4	YNL292W	MRPL4	P36517	319 aa		4.88	□□□□□ -1.63
PUS4	YNL292W	MBB1	P39534	108 aa		4.88	□□□□□ -1.63
PUS4	YNL292W	SNN1	P48232	102 aa		4.88	□□□□□ -1.63
PUS4	YNL292W	TMA23	Q03525	211 aa		4.88	□□□□□ -1.63
PUS4	YNL292W	ATC1	Q04005	294 aa		4.88	□□□□□ -1.63
PUS4	YNL292W	YPR145C-A	Q2V2P0	78 aa		4.88	□□□□□ -1.63
PUS4	YNL292W	RPS2	P25443	254 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms